RNA–Protein interactions for RNA: ENST00000376925.7

CST3-201, Transcript of cystatin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CST3, Length 873 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CST3-201ENST00000376925 PCBP2Q15366 365 aaKnown RBP eCLIP15.81■□□□□ 0.121e-323■■■■■ 39.9
CST3-201ENST00000376925 DDX3XO00571 662 aaKnown RBP eCLIP17.2■□□□□ 0.344e-58■■□□□ 14.3
CST3-201ENST00000376925 RPS3P23396 243 aaKnown RBP eCLIP16.4■□□□□ 0.222e-41■■■■■ 35.1
CST3-201ENST00000376925 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.03■□□□□ 0.965e-40■■■□□ 17
CST3-201ENST00000376925 ILF3Q12906 894 aaKnown RBP eCLIP16.96■□□□□ 0.311e-37■■■□□ 14.9
CST3-201ENST00000376925 SND1Q7KZF4 910 aaKnown RBP eCLIP17.51■□□□□ 0.392e-23■■■■■ 46.7
CST3-201ENST00000376925 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28■■■□□ 2.075e-20■□□□□ 10.9
CST3-201ENST00000376925 LARP4Q71RC2 724 aaKnown RBP eCLIP15.47■□□□□ 0.079e-18■■■■□ 22.4
CST3-201ENST00000376925 TIA1P31483 386 aaKnown RBP eCLIP15.56■□□□□ 0.086e-17■■■□□ 17.5
CST3-201ENST00000376925 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.84■□□□□ 0.771e-14■■□□□ 13
CST3-201ENST00000376925 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.92■□□□□ 0.143e-13■■□□□ 11.5
CST3-201ENST00000376925 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.95■□□□□ 0.466e-13■■■■■ 77.6
CST3-201ENST00000376925 HNRNPKP61978 463 aaKnown RBP eCLIP17.22■□□□□ 0.357e-13■■■□□ 15.5
CST3-201ENST00000376925 SF3B4Q15427 424 aaKnown RBP eCLIP15.56■□□□□ 0.082e-11■■■■■ 38.4
CST3-201ENST00000376925 EIF4G2P78344 907 aaKnown RBP eCLIP23.57■■□□□ 1.365e-11■■■■■ 46.6
CST3-201ENST00000376925 AQRO60306 1485 aaKnown RBP eCLIP30.82■■■□□ 2.538e-11■■■■□ 26.1
CST3-201ENST00000376925 PCBP1Q15365 356 aaKnown RBP eCLIP18.96■□□□□ 0.631e-10■■■■■ 88
CST3-201ENST00000376925 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.79■□□□□ 0.286e-10■■■■■ 33
CST3-201ENST00000376925 NIP7Q9Y221 180 aaKnown RBP eCLIP22.31■■□□□ 1.162e-9■□□□□ 9.3
CST3-201ENST00000376925 RBM5P52756 815 aaKnown RBP eCLIP21.22■□□□□ 0.997e-9■■■□□ 17.6
CST3-201ENST00000376925 TIAL1Q01085 375 aaKnown RBP eCLIP16.14■□□□□ 0.171e-8■□□□□ 10.8
CST3-201ENST00000376925 DDX6P26196 483 aaKnown RBP eCLIP18.23■□□□□ 0.514e-8■■■□□ 17.5
CST3-201ENST00000376925 PABPC4Q13310 644 aaKnown RBP eCLIP20.65■□□□□ 0.96e-8■■■■□ 20.3
CST3-201ENST00000376925 CDC40O60508 579 aaKnown RBP eCLIP15.72■□□□□ 0.111e-7■■■■□ 24.1
CST3-201ENST00000376925 YBX3P16989 372 aaKnown RBP eCLIP23.16■■□□□ 1.31e-7■□□□□ 9.9
CST3-201ENST00000376925 IGF2BP3O00425 579 aaKnown RBP eCLIP21.12■□□□□ 0.972e-7■■■■□ 21.3
CST3-201ENST00000376925 TARDBPQ13148 414 aaKnown RBP eCLIP17.18■□□□□ 0.343e-7■■■■□ 23.3
CST3-201ENST00000376925 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.77■□□□□ 0.124e-7■□□□□ 8.9
CST3-201ENST00000376925 DKC1O60832 514 aaKnown RBP eCLIP19.11■□□□□ 0.654e-7■■■□□ 17.9
CST3-201ENST00000376925 EFTUD2Q15029 972 aaKnown RBP eCLIP15.88■□□□□ 0.135e-7■■■■■ 41
CST3-201ENST00000376925 SRSF7Q16629 238 aaKnown RBP eCLIP13.19□□□□□ -0.39e-7■■□□□ 14.5
CST3-201ENST00000376925 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.84□□□□□ -0.031e-6■■■■■ 39
CST3-201ENST00000376925 SF3A3Q12874 501 aaKnown RBP eCLIP14.61□□□□□ -0.071e-6■■■■□ 24.1
CST3-201ENST00000376925 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.73■□□□□ 0.592e-6■□□□□ 10.8
CST3-201ENST00000376925 RBFOX2O43251 390 aaKnown RBP eCLIP12.97□□□□□ -0.334e-6■■□□□ 11.5
CST3-201ENST00000376925 SMNDC1O75940 238 aaKnown RBP eCLIP15.29■□□□□ 0.045e-6■□□□□ 10.8
Retrieved 36 of 36 RNA–protein pairs in 8.7 ms