RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 SF3B4Q15427 424 aaKnown RBP eCLIP12.67□□□□□ -0.381e-25■■■■■ 49.5
ACTN1-202ENST00000376839 SRSF7Q16629 238 aaKnown RBP eCLIP11.3□□□□□ -0.63e-14■■■■□ 24.7
ACTN1-202ENST00000376839 U2AF2P26368 475 aaKnown RBP eCLIP15.48■□□□□ 0.071e-13■■■□□ 15
ACTN1-202ENST00000376839 EWSR1Q01844 656 aaKnown RBP eCLIP11.43□□□□□ -0.581e-13■■■■■ 50.4
ACTN1-202ENST00000376839 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.28□□□□□ -0.122e-13■■■■■ 158.6
ACTN1-202ENST00000376839 IGF2BP3O00425 579 aaKnown RBP eCLIP14.08□□□□□ -0.162e-13■■■■□ 21.8
ACTN1-202ENST00000376839 UPF1Q92900 1129 aaKnown RBP eCLIP12.83□□□□□ -0.366e-12■■□□□ 13.4
ACTN1-202ENST00000376839 PPIGQ13427 754 aaKnown RBP eCLIP12.74□□□□□ -0.379e-12■□□□□ 11
ACTN1-202ENST00000376839 NOLC1Q14978 699 aaKnown RBP eCLIP15.78■□□□□ 0.128e-10■□□□□ 9.7
ACTN1-202ENST00000376839 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.23■□□□□ 0.034e-9■■□□□ 14.3
ACTN1-202ENST00000376839 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.82□□□□□ -0.25e-8■■■■■ 204.6
ACTN1-202ENST00000376839 G3BP1Q13283 466 aaKnown RBP eCLIP15.77■□□□□ 0.127e-8■■□□□ 12.9
ACTN1-202ENST00000376839 YBX3P16989 372 aaKnown RBP eCLIP13.41□□□□□ -0.269e-8■■■□□ 15.8
ACTN1-202ENST00000376839 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.75□□□□□ -0.211e-7■□□□□ 10.1
ACTN1-202ENST00000376839 DKC1O60832 514 aaKnown RBP eCLIP13.93□□□□□ -0.181e-7■■■■■ 54.2
ACTN1-202ENST00000376839 PTBP1P26599 531 aaKnown RBP eCLIP12.33□□□□□ -0.431e-7■■■■■ 30.8
ACTN1-202ENST00000376839 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.67■□□□□ 0.262e-7■■■■□ 20.7
ACTN1-202ENST00000376839 SFPQP23246 707 aaKnown RBP eCLIP15.32■□□□□ 0.042e-7■■□□□ 12.9
ACTN1-202ENST00000376839 HNRNPUQ00839 825 aaKnown RBP eCLIP18.45■□□□□ 0.543e-7■■□□□ 13
ACTN1-202ENST00000376839 SF3A3Q12874 501 aaKnown RBP eCLIP14.28□□□□□ -0.124e-7■■■■■ 34.5
ACTN1-202ENST00000376839 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.42□□□□□ -0.14e-7■■■■■ 58.1
ACTN1-202ENST00000376839 AQRO60306 1485 aaKnown RBP eCLIP18.91■□□□□ 0.624e-7■■■■■ 30.8
ACTN1-202ENST00000376839 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.17□□□□□ -0.35e-7■■■■□ 24
ACTN1-202ENST00000376839 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.44□□□□□ -0.15e-7■■■□□ 15.3
ACTN1-202ENST00000376839 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.2□□□□□ -0.145e-7■■■■■ 33.1
ACTN1-202ENST00000376839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.71■□□□□ 0.435e-7■□□□□ 10.3
ACTN1-202ENST00000376839 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.9□□□□□ -0.835e-7■■■□□ 17.7
ACTN1-202ENST00000376839 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.21□□□□□ -0.146e-7■■■■■ 31.5
ACTN1-202ENST00000376839 EIF4G2P78344 907 aaKnown RBP eCLIP18.42■□□□□ 0.546e-7■■■■■ 48.9
ACTN1-202ENST00000376839 RPS3P23396 243 aaKnown RBP eCLIP12.9□□□□□ -0.346e-7■■□□□ 13.4
ACTN1-202ENST00000376839 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.51■□□□□ 0.077e-7■■■□□ 15.2
ACTN1-202ENST00000376839 SND1Q7KZF4 910 aaKnown RBP eCLIP14.68□□□□□ -0.069e-7■□□□□ 8.5
ACTN1-202ENST00000376839 ZNF622Q969S3 477 aaKnown RBP eCLIP14.22□□□□□ -0.139e-7■□□□□ 10.1
ACTN1-202ENST00000376839 PRPF4O43172 522 aaKnown RBP eCLIP13.97□□□□□ -0.179e-7■■■□□ 15.8
ACTN1-202ENST00000376839 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.17□□□□□ -0.31e-6■■■■■ 31.4
ACTN1-202ENST00000376839 HNRNPMP52272 730 aaKnown RBP eCLIP17.89■□□□□ 0.451e-6■■■■□ 24.2
ACTN1-202ENST00000376839 FXR2P51116 673 aaKnown RBP eCLIP14.65□□□□□ -0.061e-6■■■■□ 21.1
ACTN1-202ENST00000376839 MATR3P43243 847 aaKnown RBP eCLIP14.69□□□□□ -0.062e-6■■■■□ 22.4
ACTN1-202ENST00000376839 PCBP2Q15366 365 aaKnown RBP eCLIP13□□□□□ -0.332e-6■■■□□ 17.9
ACTN1-202ENST00000376839 METAP2P50579 478 aaKnown RBP eCLIP15.3■□□□□ 0.042e-6■■■□□ 17.8
ACTN1-202ENST00000376839 RBFOX2O43251 390 aaKnown RBP eCLIP10.98□□□□□ -0.652e-6■■□□□ 13.9
ACTN1-202ENST00000376839 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.21□□□□□ -0.462e-6■■□□□ 14.2
ACTN1-202ENST00000376839 RBM22Q9NW64 420 aaKnown RBP eCLIP13.31□□□□□ -0.282e-6■■□□□ 12.7
ACTN1-202ENST00000376839 EFTUD2Q15029 972 aaKnown RBP eCLIP13.96□□□□□ -0.182e-6■■■□□ 18.9
ACTN1-202ENST00000376839 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.39■□□□□ 0.052e-6■■■□□ 15.7
ACTN1-202ENST00000376839 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.7□□□□□ -0.383e-6■□□□□ 10.9
ACTN1-202ENST00000376839 SF3B1O75533 1304 aaKnown RBP eCLIP13.56□□□□□ -0.243e-6■■■■■ 155
ACTN1-202ENST00000376839 FMR1Q06787 632 aaKnown RBP eCLIP15.19■□□□□ 0.023e-6■■■□□ 16.8
ACTN1-202ENST00000376839 TIAL1Q01085 375 aaKnown RBP eCLIP13.22□□□□□ -0.294e-6■■■□□ 18.3
ACTN1-202ENST00000376839 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.47□□□□□ -0.414e-6■■□□□ 13.3
ACTN1-202ENST00000376839 PUM1Q14671 1186 aaKnown RBP eCLIP12.63□□□□□ -0.395e-6■■■□□ 17
ACTN1-202ENST00000376839 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.29■□□□□ 0.045e-6■■■■■ 34.6
ACTN1-202ENST00000376839 HNRNPLP14866 589 aaKnown RBP eCLIP13.39□□□□□ -0.276e-6■■□□□ 12.3
ACTN1-202ENST00000376839 RBM15Q96T37 977 aaKnown RBP eCLIP14.04□□□□□ -0.168e-6■■■■■ 30.1
Retrieved 54 of 54 RNA–protein pairs in 13.6 ms