RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 FCGBPQ9Y6R7 5405 aaPredicted RBP4.38□□□□□ -1.71
ACTN1-202ENST00000376839 KRTAP19-6Q3LI70 58 aa4.37□□□□□ -1.71
ACTN1-202ENST00000376839 KRTAP4-3Q9BYR4 195 aa4.36□□□□□ -1.71
ACTN1-202ENST00000376839 LOC100996750A0A140TA64 210 aa4.36□□□□□ -1.71
ACTN1-202ENST00000376839 MUC12Q9UKN1 5478 aa4.34□□□□□ -1.71
ACTN1-202ENST00000376839 MT1GP13640 62 aa4.29□□□□□ -1.72
ACTN1-202ENST00000376839 MT1MQ8N339 61 aa4.24□□□□□ -1.73
ACTN1-202ENST00000376839 KRTAP19-3Q7Z4W3 81 aa4.22□□□□□ -1.73
ACTN1-202ENST00000376839 CRCT1Q9UGL9 99 aa4.21□□□□□ -1.74
ACTN1-202ENST00000376839 DSTQ03001 7570 aaKnown RBP4.15□□□□□ -1.75
ACTN1-202ENST00000376839 LCE5AQ5TCM9 118 aa4.07□□□□□ -1.76
ACTN1-202ENST00000376839 KRTAP12-4P60329 112 aa4.05□□□□□ -1.76
ACTN1-202ENST00000376839 SPRR2FQ96RM1 72 aa4.05□□□□□ -1.76
ACTN1-202ENST00000376839 LCE3BQ5TA77 95 aa3.99□□□□□ -1.77
ACTN1-202ENST00000376839 MACF1Q9UPN3 7388 aaKnown RBP3.98□□□□□ -1.77
ACTN1-202ENST00000376839 KRTAP4-9Q9BYQ8 210 aa3.95□□□□□ -1.78
ACTN1-202ENST00000376839 MDN1Q9NU22 5596 aa3.92□□□□□ -1.78
ACTN1-202ENST00000376839 KRTAP6-1Q3LI64 71 aa3.89□□□□□ -1.79
ACTN1-202ENST00000376839 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
ACTN1-202ENST00000376839 SYNE2Q8WXH0 6885 aaKnown RBP3.84□□□□□ -1.79
ACTN1-202ENST00000376839 MT1AP04731 61 aa3.82□□□□□ -1.8
ACTN1-202ENST00000376839 KRTAP9-2Q9BYQ4 174 aa3.76□□□□□ -1.81
ACTN1-202ENST00000376839 LCE1AQ5T7P2 110 aa3.76□□□□□ -1.81
ACTN1-202ENST00000376839 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
ACTN1-202ENST00000376839 KRTAP5-5Q701N2 237 aaPredicted RBP3.74□□□□□ -1.81
ACTN1-202ENST00000376839 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
ACTN1-202ENST00000376839 KRTAP5-9P26371 169 aa3.68□□□□□ -1.82
ACTN1-202ENST00000376839 KRTAP9-7A8MTY7 169 aa3.67□□□□□ -1.82
ACTN1-202ENST00000376839 KRTAP9-4Q9BYQ2 154 aa3.65□□□□□ -1.82
ACTN1-202ENST00000376839 SPRR2EP22531 72 aa3.64□□□□□ -1.83
ACTN1-202ENST00000376839 SPRR2BP35325 72 aa3.64□□□□□ -1.83
ACTN1-202ENST00000376839 SPRR2AP35326 72 aa3.64□□□□□ -1.83
ACTN1-202ENST00000376839 PRM1P04553 51 aa3.61□□□□□ -1.83
ACTN1-202ENST00000376839 LCE4AQ5TA78 99 aa3.6□□□□□ -1.83
ACTN1-202ENST00000376839 KRTAP9-9Q9BYP9 154 aa3.57□□□□□ -1.84
ACTN1-202ENST00000376839 KRTAP9-6A0A140TA67 174 aa3.56□□□□□ -1.84
ACTN1-202ENST00000376839 KRTAP2-2Q9BYT5 123 aa3.53□□□□□ -1.84
ACTN1-202ENST00000376839 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
ACTN1-202ENST00000376839 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
ACTN1-202ENST00000376839 SPRR2DP22532 72 aa3.47□□□□□ -1.85
ACTN1-202ENST00000376839 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
ACTN1-202ENST00000376839 MT3P25713 68 aa3.4□□□□□ -1.87
ACTN1-202ENST00000376839 KRTAP6-3Q3LI67 103 aa3.35□□□□□ -1.87
ACTN1-202ENST00000376839 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.29□□□□□ -1.88
ACTN1-202ENST00000376839 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
ACTN1-202ENST00000376839 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
ACTN1-202ENST00000376839 KRTAP4-6Q9BYQ5 205 aa3.15□□□□□ -1.91
ACTN1-202ENST00000376839 NEBP20929 6669 aa3.11□□□□□ -1.91
ACTN1-202ENST00000376839 MT4P47944 62 aa3.1□□□□□ -1.91
ACTN1-202ENST00000376839 LCE1DQ5T752 114 aa3.09□□□□□ -1.92
ACTN1-202ENST00000376839 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
ACTN1-202ENST00000376839 KRTAP4-12Q9BQ66 201 aa3.05□□□□□ -1.92
ACTN1-202ENST00000376839 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
ACTN1-202ENST00000376839 HMCN1Q96RW7 5635 aa3□□□□□ -1.93
ACTN1-202ENST00000376839 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
ACTN1-202ENST00000376839 KRTAP5-3Q6L8H2 238 aa2.89□□□□□ -1.95
ACTN1-202ENST00000376839 KRTAP20-1Q3LI63 56 aa2.81□□□□□ -1.96
ACTN1-202ENST00000376839 LCE1BQ5T7P3 118 aa2.78□□□□□ -1.97
ACTN1-202ENST00000376839 KRTAP5-10Q6L8G5 202 aa2.74□□□□□ -1.97
ACTN1-202ENST00000376839 KRTAP4-11Q9BYQ6 195 aa2.73□□□□□ -1.97
ACTN1-202ENST00000376839 KRTAP5-1Q6L8H4 278 aa2.69□□□□□ -1.98
ACTN1-202ENST00000376839 KRTAP4-2Q9BYR5 136 aa2.65□□□□□ -1.99
ACTN1-202ENST00000376839 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
ACTN1-202ENST00000376839 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
ACTN1-202ENST00000376839 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.46□□□□□ -2.02
ACTN1-202ENST00000376839 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
ACTN1-202ENST00000376839 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
ACTN1-202ENST00000376839 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
ACTN1-202ENST00000376839 AHNAK2Q8IVF2 5795 aa2.32□□□□□ -2.04
ACTN1-202ENST00000376839 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
ACTN1-202ENST00000376839 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
ACTN1-202ENST00000376839 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
ACTN1-202ENST00000376839 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
ACTN1-202ENST00000376839 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
ACTN1-202ENST00000376839 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
ACTN1-202ENST00000376839 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
ACTN1-202ENST00000376839 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 13.1 ms