RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 P3H3Q8IVL6 736 aa19.11■□□□□ 0.65
ACTN1-202ENST00000376839 PCF11O94913 1555 aaKnown RBP19.1■□□□□ 0.65
ACTN1-202ENST00000376839 FAM50AQ14320 339 aaKnown RBP19.09■□□□□ 0.65
ACTN1-202ENST00000376839 FHAD1B1AJZ9 1412 aa19.08■□□□□ 0.65
ACTN1-202ENST00000376839 CFAP43Q8NDM7 1665 aa19.07■□□□□ 0.64
ACTN1-202ENST00000376839 SUPT16HQ9Y5B9 1047 aaKnown RBP19.06■□□□□ 0.64
ACTN1-202ENST00000376839 ATP1B4Q9UN42 357 aaPredicted RBP19.05■□□□□ 0.64
ACTN1-202ENST00000376839 FANCD2Q9BXW9 1451 aa19.05■□□□□ 0.64
ACTN1-202ENST00000376839 SIN3AQ96ST3 1273 aa19.05■□□□□ 0.64
ACTN1-202ENST00000376839 FHOD3Q2V2M9 1422 aa19.04■□□□□ 0.64
ACTN1-202ENST00000376839 KCNH8Q96L42 1107 aa19.04■□□□□ 0.64
ACTN1-202ENST00000376839 RAD54L2Q9Y4B4 1467 aa19.03■□□□□ 0.64
ACTN1-202ENST00000376839 WDR97A6NE52 1622 aa19.03■□□□□ 0.64
ACTN1-202ENST00000376839 CC2D2AQ9P2K1 1620 aa19■□□□□ 0.63
ACTN1-202ENST00000376839 DNMBPQ6XZF7 1577 aa18.97■□□□□ 0.63
ACTN1-202ENST00000376839 ABCA10Q8WWZ4 1543 aa18.97■□□□□ 0.63
ACTN1-202ENST00000376839 POLA1P09884 1462 aaPredicted RBP18.97■□□□□ 0.63
ACTN1-202ENST00000376839 FYCO1Q9BQS8 1478 aa18.97■□□□□ 0.63
ACTN1-202ENST00000376839 TOPBP1Q92547 1522 aa18.95■□□□□ 0.62
ACTN1-202ENST00000376839 CASKIN1Q8WXD9 1431 aa18.94■□□□□ 0.62
ACTN1-202ENST00000376839 EFCAB5A4FU69 1503 aa18.94■□□□□ 0.62
ACTN1-202ENST00000376839 DDX10Q13206 875 aaKnown RBP18.94■□□□□ 0.62
ACTN1-202ENST00000376839 MYT1Q01538 1121 aa18.92■□□□□ 0.62
ACTN1-202ENST00000376839 NESP48681 1621 aa18.91■□□□□ 0.62
ACTN1-202ENST00000376839 AQRO60306 1485 aaKnown RBP eCLIP18.91■□□□□ 0.624e-7■■■■■ 30.8
ACTN1-202ENST00000376839 CUL7Q14999 1698 aa18.88■□□□□ 0.61
ACTN1-202ENST00000376839 CTTNBP2Q8WZ74 1663 aa18.88■□□□□ 0.61
ACTN1-202ENST00000376839 HIRIP3Q9BW71 556 aaPredicted RBP18.88■□□□□ 0.61
ACTN1-202ENST00000376839 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.88■□□□□ 0.61
ACTN1-202ENST00000376839 PPP1R15AO75807 674 aaPredicted RBP18.87■□□□□ 0.61
ACTN1-202ENST00000376839 FGD6Q6ZV73 1430 aa18.86■□□□□ 0.61
ACTN1-202ENST00000376839 TIMELESSQ9UNS1 1208 aa18.86■□□□□ 0.61
ACTN1-202ENST00000376839 SNAPC4Q5SXM2 1469 aa18.85■□□□□ 0.61
ACTN1-202ENST00000376839 FMN1Q68DA7 1419 aa18.84■□□□□ 0.61
ACTN1-202ENST00000376839 PTPRKQ15262 1439 aa18.82■□□□□ 0.6
ACTN1-202ENST00000376839 MTUS2Q5JR59 1369 aa18.8■□□□□ 0.6
ACTN1-202ENST00000376839 CCDC18Q5T9S5 1454 aa18.8■□□□□ 0.6
ACTN1-202ENST00000376839 TSHZ2Q9NRE2 1034 aa18.78■□□□□ 0.6
ACTN1-202ENST00000376839 URB2Q14146 1524 aaKnown RBP18.78■□□□□ 0.6
ACTN1-202ENST00000376839 LRRIQ1Q96JM4 1722 aa18.77■□□□□ 0.6
ACTN1-202ENST00000376839 TDRD9Q8NDG6 1382 aaKnown RBP18.77■□□□□ 0.6
ACTN1-202ENST00000376839 HFM1A2PYH4 1435 aa18.76■□□□□ 0.59
ACTN1-202ENST00000376839 SAMD9Q5K651 1589 aa18.76■□□□□ 0.59
ACTN1-202ENST00000376839 TONSLQ96HA7 1378 aa18.75■□□□□ 0.59
ACTN1-202ENST00000376839 PTPN23Q9H3S7 1636 aa18.75■□□□□ 0.59
ACTN1-202ENST00000376839 UACAQ9BZF9 1416 aa18.74■□□□□ 0.59
ACTN1-202ENST00000376839 BCANQ96GW7 911 aa18.74■□□□□ 0.59
ACTN1-202ENST00000376839 NCOA2Q15596 1464 aa18.73■□□□□ 0.59
ACTN1-202ENST00000376839 ABCA5Q8WWZ7 1642 aa18.73■□□□□ 0.59
ACTN1-202ENST00000376839 GRIN2BQ13224 1484 aa18.73■□□□□ 0.59
ACTN1-202ENST00000376839 NAIPQ13075 1403 aa18.72■□□□□ 0.59
ACTN1-202ENST00000376839 MYOM3Q5VTT5 1437 aa18.71■□□□□ 0.59
ACTN1-202ENST00000376839 FKBP8Q14318 412 aa18.71■□□□□ 0.59
ACTN1-202ENST00000376839 ANP32CO43423 234 aa18.7■□□□□ 0.58
ACTN1-202ENST00000376839 GAPVD1Q14C86 1478 aa18.7■□□□□ 0.58
ACTN1-202ENST00000376839 CCER2I3L3R5 266 aa18.7■□□□□ 0.58
ACTN1-202ENST00000376839 TRIM52Q96A61 297 aa18.69■□□□□ 0.58
ACTN1-202ENST00000376839 LAMC3Q9Y6N6 1575 aa18.68■□□□□ 0.58
ACTN1-202ENST00000376839 SUPT6HQ7KZ85 1726 aaKnown RBP18.66■□□□□ 0.58
ACTN1-202ENST00000376839 EHBP1L1Q8N3D4 1523 aa18.66■□□□□ 0.58
ACTN1-202ENST00000376839 THOC2Q8NI27 1593 aaKnown RBP18.65■□□□□ 0.58
ACTN1-202ENST00000376839 MAGI3Q5TCQ9 1506 aa18.65■□□□□ 0.58
ACTN1-202ENST00000376839 KDM5BQ9UGL1 1544 aa18.64■□□□□ 0.58
ACTN1-202ENST00000376839 UGGT2Q9NYU1 1516 aa18.63■□□□□ 0.57
ACTN1-202ENST00000376839 ARHGEF11O15085 1522 aa18.61■□□□□ 0.57
ACTN1-202ENST00000376839 RRP7BPQ9NSQ0 103 aa18.6■□□□□ 0.57
ACTN1-202ENST00000376839 CHIC2Q9UKJ5 165 aa18.59■□□□□ 0.57
ACTN1-202ENST00000376839 DNAJC5BQ9UF47 199 aa18.58■□□□□ 0.56
ACTN1-202ENST00000376839 DENND4BO75064 1496 aaPredicted RBP18.57■□□□□ 0.56
ACTN1-202ENST00000376839 PDS5BQ9NTI5 1447 aa18.56■□□□□ 0.56
ACTN1-202ENST00000376839 NEFLP07196 543 aa18.56■□□□□ 0.56
ACTN1-202ENST00000376839 KIF21AQ7Z4S6 1674 aa18.55■□□□□ 0.56
ACTN1-202ENST00000376839 TCOF1Q13428 1488 aaKnown RBP18.54■□□□□ 0.56
ACTN1-202ENST00000376839 KDM6BO15054 1643 aa18.54■□□□□ 0.56
ACTN1-202ENST00000376839 TARBP1Q13395 1621 aaKnown RBP18.54■□□□□ 0.56
ACTN1-202ENST00000376839 GCC2Q8IWJ2 1684 aa18.52■□□□□ 0.56
ACTN1-202ENST00000376839 HECW1Q76N89 1606 aa18.51■□□□□ 0.55
ACTN1-202ENST00000376839 WASHC2AQ641Q2 1341 aa18.51■□□□□ 0.55
ACTN1-202ENST00000376839 HSPA5P11021 654 aaKnown RBP18.5■□□□□ 0.55
ACTN1-202ENST00000376839 EPRSP07814 1512 aaKnown RBP18.5■□□□□ 0.55
ACTN1-202ENST00000376839 CDK13Q14004 1512 aaKnown RBP18.5■□□□□ 0.55
ACTN1-202ENST00000376839 ARID3CA6NKF2 412 aa18.49■□□□□ 0.55
ACTN1-202ENST00000376839 IQGAP2Q13576 1575 aa18.48■□□□□ 0.55
ACTN1-202ENST00000376839 AKNAQ7Z591 1439 aa18.47■□□□□ 0.55
ACTN1-202ENST00000376839 PBRM1Q86U86 1689 aa18.47■□□□□ 0.55
ACTN1-202ENST00000376839 HNRNPUQ00839 825 aaKnown RBP eCLIP18.45■□□□□ 0.543e-7■■□□□ 13
ACTN1-202ENST00000376839 FOXD1Q16676 465 aa18.45■□□□□ 0.54
ACTN1-202ENST00000376839 MPHOSPH9Q99550 1183 aa18.45■□□□□ 0.54
ACTN1-202ENST00000376839 WDR62O43379 1518 aa18.44■□□□□ 0.54
ACTN1-202ENST00000376839 MIA2Q96PC5 1412 aa18.43■□□□□ 0.54
ACTN1-202ENST00000376839 ANP32EQ9BTT0 268 aa18.43■□□□□ 0.54
ACTN1-202ENST00000376839 ADAMTS12P58397 1594 aa18.43■□□□□ 0.54
ACTN1-202ENST00000376839 L3MBTL2Q969R5 705 aa18.42■□□□□ 0.54
ACTN1-202ENST00000376839 EIF4G2P78344 907 aaKnown RBP eCLIP18.42■□□□□ 0.546e-7■■■■■ 48.9
ACTN1-202ENST00000376839 RBM19Q9Y4C8 960 aaKnown RBP18.4■□□□□ 0.54
ACTN1-202ENST00000376839 C11orf95C9JLR9 678 aaPredicted RBP18.39■□□□□ 0.53
ACTN1-202ENST00000376839 CCDC184Q52MB2 194 aa18.38■□□□□ 0.53
ACTN1-202ENST00000376839 CNTLNQ9NXG0 1405 aa18.38■□□□□ 0.53
ACTN1-202ENST00000376839 IRX6P78412 446 aaPredicted RBP18.36■□□□□ 0.53
ACTN1-202ENST00000376839 DAPK1P53355 1430 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms