RNA–Protein interactions for RNA: ENST00000376665.4

GATA1-201, Transcript of GATA binding protein 1, humanhuman

TSL 5 BASIC

Gene GATA1, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATA1-201ENST00000376665 NISCHQ9Y2I1 1504 aa29.01■■■□□ 2.23
GATA1-201ENST00000376665 CCDC180Q9P1Z9 1646 aa25.85■■□□□ 1.73
GATA1-201ENST00000376665 ABCC9O60706 1549 aa25.25■■□□□ 1.63
GATA1-201ENST00000376665 RB1CC1Q8TDY2 1594 aa24.33■■□□□ 1.49
GATA1-201ENST00000376665 NACADO15069 1562 aa24.3■■□□□ 1.48
GATA1-201ENST00000376665 DCAF8L2P0C7V8 631 aa24.26■■□□□ 1.47
GATA1-201ENST00000376665 ZCCHC6Q5VYS8 1495 aaKnown RBP24.16■■□□□ 1.46
GATA1-201ENST00000376665 MYO15BQ96JP2 1530 aa24.15■■□□□ 1.46
GATA1-201ENST00000376665 DCAF1Q9Y4B6 1507 aa24.05■■□□□ 1.44
GATA1-201ENST00000376665 DNAJC5BQ9UF47 199 aa23.74■■□□□ 1.39
GATA1-201ENST00000376665 UNC13AQ9UPW8 1703 aa23.7■■□□□ 1.39
GATA1-201ENST00000376665 PABPN1Q86U42 306 aaKnown RBP eCLIP23.54■■□□□ 1.36
GATA1-201ENST00000376665 SCRIBQ14160 1630 aa23.51■■□□□ 1.35
GATA1-201ENST00000376665 BICRAQ9NZM4 1560 aa23.5■■□□□ 1.35
GATA1-201ENST00000376665 SHROOM4Q9ULL8 1493 aa23.38■■□□□ 1.33
GATA1-201ENST00000376665 EIF4G1Q04637 1599 aaKnown RBP22.93■■□□□ 1.26
GATA1-201ENST00000376665 CC2D2AQ9P2K1 1620 aa22.82■■□□□ 1.24
GATA1-201ENST00000376665 CECR2Q9BXF3 1484 aa22.74■■□□□ 1.23
GATA1-201ENST00000376665 BAZ1AQ9NRL2 1556 aaPredicted RBP22.52■■□□□ 1.2
GATA1-201ENST00000376665 SMARCA4P51532 1647 aa22.51■■□□□ 1.19
GATA1-201ENST00000376665 SMARCA2P51531 1590 aa22.42■■□□□ 1.18
GATA1-201ENST00000376665 NCAPD3P42695 1498 aa22.4■■□□□ 1.18
GATA1-201ENST00000376665 ATAD2BQ9ULI0 1458 aa22.38■■□□□ 1.17
GATA1-201ENST00000376665 MROH2BQ7Z745 1585 aa22.32■■□□□ 1.16
GATA1-201ENST00000376665 PEG3Q9GZU2 1588 aa22.31■■□□□ 1.16
GATA1-201ENST00000376665 HMGXB3Q12766 1538 aa22.3■■□□□ 1.16
GATA1-201ENST00000376665 BAZ1BQ9UIG0 1483 aaKnown RBP22.24■■□□□ 1.15
GATA1-201ENST00000376665 WIZO95785 1651 aa22.08■■□□□ 1.13
GATA1-201ENST00000376665 RSF1Q96T23 1441 aaPredicted RBP22.07■■□□□ 1.12
GATA1-201ENST00000376665 TOP2AP11388 1531 aaKnown RBP21.89■■□□□ 1.09
GATA1-201ENST00000376665 DNAJC5Q9H3Z4 198 aa21.84■■□□□ 1.09
GATA1-201ENST00000376665 LAMC3Q9Y6N6 1575 aa21.83■■□□□ 1.09
GATA1-201ENST00000376665 ERCC6Q03468 1493 aa21.81■■□□□ 1.08
GATA1-201ENST00000376665 NESP48681 1621 aa21.79■■□□□ 1.08
GATA1-201ENST00000376665 CUX2O14529 1486 aa21.77■■□□□ 1.08
GATA1-201ENST00000376665 CADPSQ9ULU8 1353 aa21.74■■□□□ 1.07
GATA1-201ENST00000376665 PDS5BQ9NTI5 1447 aa21.7■■□□□ 1.06
GATA1-201ENST00000376665 CCDC88BA6NC98 1476 aa21.6■■□□□ 1.05
GATA1-201ENST00000376665 CFTRP13569 1480 aa21.6■■□□□ 1.05
GATA1-201ENST00000376665 KIF21AQ7Z4S6 1674 aa21.57■■□□□ 1.04
GATA1-201ENST00000376665 SUPT5HO00267 1087 aaKnown RBP21.52■■□□□ 1.04
GATA1-201ENST00000376665 THOC2Q8NI27 1593 aaKnown RBP21.5■■□□□ 1.03
GATA1-201ENST00000376665 FANCD2Q9BXW9 1451 aa21.49■■□□□ 1.03
GATA1-201ENST00000376665 CEP164Q9UPV0 1460 aa21.49■■□□□ 1.03
GATA1-201ENST00000376665 PRDM2Q13029 1718 aa21.48■■□□□ 1.03
GATA1-201ENST00000376665 MRC2Q9UBG0 1479 aa21.45■■□□□ 1.02
GATA1-201ENST00000376665 WDR62O43379 1518 aa21.36■■□□□ 1.01
GATA1-201ENST00000376665 URB2Q14146 1524 aaKnown RBP21.23■□□□□ 0.99
GATA1-201ENST00000376665 ABCC8Q09428 1581 aa21.22■□□□□ 0.99
GATA1-201ENST00000376665 TOPBP1Q92547 1522 aa21.14■□□□□ 0.97
GATA1-201ENST00000376665 DNMBPQ6XZF7 1577 aa21.13■□□□□ 0.97
GATA1-201ENST00000376665 IFT140Q96RY7 1462 aa21.04■□□□□ 0.96
GATA1-201ENST00000376665 POLA1P09884 1462 aaPredicted RBP20.94■□□□□ 0.94
GATA1-201ENST00000376665 CUX1P39880 1505 aa20.94■□□□□ 0.94
GATA1-201ENST00000376665 FGD5Q6ZNL6 1462 aa20.9■□□□□ 0.94
GATA1-201ENST00000376665 TARBP1Q13395 1621 aaKnown RBP20.89■□□□□ 0.94
GATA1-201ENST00000376665 TRIM41Q8WV44 630 aa20.89■□□□□ 0.93
GATA1-201ENST00000376665 SOGA1O94964 1423 aa20.88■□□□□ 0.93
GATA1-201ENST00000376665 ZNF608Q9ULD9 1512 aaPredicted RBP20.87■□□□□ 0.93
GATA1-201ENST00000376665 WRNQ14191 1432 aaPredicted RBP eCLIP20.86■□□□□ 0.93
GATA1-201ENST00000376665 EIF4G3O43432 1585 aaKnown RBP20.83■□□□□ 0.92
GATA1-201ENST00000376665 RAD54L2Q9Y4B4 1467 aa20.82■□□□□ 0.92
GATA1-201ENST00000376665 WDR97A6NE52 1622 aa20.82■□□□□ 0.92
GATA1-201ENST00000376665 TOP2BQ02880 1626 aa20.81■□□□□ 0.92
GATA1-201ENST00000376665 BIVM-ERCC5R4GMW8 1640 aa20.8■□□□□ 0.92
GATA1-201ENST00000376665 OSCARQ8IYS5 282 aa20.78■□□□□ 0.92
GATA1-201ENST00000376665 AQRO60306 1485 aaKnown RBP eCLIP20.76■□□□□ 0.912e-9■■■■■ 43.3
GATA1-201ENST00000376665 SYNJ1O43426 1573 aa20.76■□□□□ 0.91
GATA1-201ENST00000376665 TDRD9Q8NDG6 1382 aaKnown RBP20.73■□□□□ 0.91
GATA1-201ENST00000376665 ABCA10Q8WWZ4 1543 aa20.71■□□□□ 0.91
GATA1-201ENST00000376665 GRIN2BQ13224 1484 aa20.66■□□□□ 0.9
GATA1-201ENST00000376665 GAPVD1Q14C86 1478 aa20.65■□□□□ 0.9
GATA1-201ENST00000376665 ABCA5Q8WWZ7 1642 aa20.62■□□□□ 0.89
GATA1-201ENST00000376665 MAGI1Q96QZ7 1491 aaPredicted RBP20.62■□□□□ 0.89
GATA1-201ENST00000376665 SNAPC4Q5SXM2 1469 aa20.6■□□□□ 0.89
GATA1-201ENST00000376665 PBRM1Q86U86 1689 aa20.6■□□□□ 0.89
GATA1-201ENST00000376665 FBLN2P98095 1184 aa20.57■□□□□ 0.88
GATA1-201ENST00000376665 CHD1O14646 1710 aa20.56■□□□□ 0.88
GATA1-201ENST00000376665 RIMBP3CA6NJZ7 1639 aa20.54■□□□□ 0.88
GATA1-201ENST00000376665 RIMBP3BA6NNM3 1639 aa20.54■□□□□ 0.88
GATA1-201ENST00000376665 RIMBP3Q9UFD9 1639 aa20.54■□□□□ 0.88
GATA1-201ENST00000376665 CHMP7Q8WUX9 453 aaPredicted RBP20.53■□□□□ 0.88
GATA1-201ENST00000376665 SYNJ2O15056 1496 aa20.52■□□□□ 0.88
GATA1-201ENST00000376665 ERICH3Q5RHP9 1530 aa20.49■□□□□ 0.87
GATA1-201ENST00000376665 KIF27Q86VH2 1401 aa20.45■□□□□ 0.86
GATA1-201ENST00000376665 ARHGEF11O15085 1522 aa20.44■□□□□ 0.86
GATA1-201ENST00000376665 ADAMTS12P58397 1594 aa20.42■□□□□ 0.86
GATA1-201ENST00000376665 FHAD1B1AJZ9 1412 aa20.42■□□□□ 0.86
GATA1-201ENST00000376665 GRIN2AQ12879 1464 aa20.37■□□□□ 0.85
GATA1-201ENST00000376665 CLASP1Q7Z460 1538 aa20.33■□□□□ 0.85
GATA1-201ENST00000376665 CUL7Q14999 1698 aa20.32■□□□□ 0.84
GATA1-201ENST00000376665 CYB5RLQ6IPT4 315 aa20.31■□□□□ 0.84
GATA1-201ENST00000376665 IGF1RP08069 1367 aa20.31■□□□□ 0.84
GATA1-201ENST00000376665 NUP160Q12769 1436 aa20.27■□□□□ 0.84
GATA1-201ENST00000376665 CHIC1Q5VXU3 224 aa20.27■□□□□ 0.84
GATA1-201ENST00000376665 CEP170Q5SW79 1584 aa20.24■□□□□ 0.83
GATA1-201ENST00000376665 ARAP1Q96P48 1450 aa20.23■□□□□ 0.83
GATA1-201ENST00000376665 CARMIL1Q5VZK9 1371 aa20.21■□□□□ 0.83
GATA1-201ENST00000376665 RUSC2Q8N2Y8 1516 aa20.14■□□□□ 0.81
GATA1-201ENST00000376665 TRHP20396 242 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms