RNA–Protein interactions for RNA: ENST00000376257.7

TCF19-202, Transcript of transcription factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCF19, Length 3,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF19-202ENST00000376257 NISCHQ9Y2I1 1504 aa21.12■□□□□ 0.97
TCF19-202ENST00000376257 DCAF8L2P0C7V8 631 aa19.46■□□□□ 0.71
TCF19-202ENST00000376257 SHROOM4Q9ULL8 1493 aa19.22■□□□□ 0.67
TCF19-202ENST00000376257 SUPT5HO00267 1087 aaKnown RBP19.02■□□□□ 0.64
TCF19-202ENST00000376257 ABCC9O60706 1549 aa18.47■□□□□ 0.55
TCF19-202ENST00000376257 EHMT2Q96KQ7 1210 aa18.06■□□□□ 0.48
TCF19-202ENST00000376257 PCGF6Q9BYE7 350 aa18.05■□□□□ 0.48
TCF19-202ENST00000376257 CHIC1Q5VXU3 224 aa17.94■□□□□ 0.46
TCF19-202ENST00000376257 LOC105371045A0A1W2PR82 267 aa17.88■□□□□ 0.45
TCF19-202ENST00000376257 PABPN1Q86U42 306 aaKnown RBP eCLIP17.88■□□□□ 0.45
TCF19-202ENST00000376257 PPARGC1BQ86YN6 1023 aaKnown RBP17.78■□□□□ 0.44
TCF19-202ENST00000376257 FAM9AQ8IZU1 332 aaPredicted RBP17.77■□□□□ 0.44
TCF19-202ENST00000376257 CCDC180Q9P1Z9 1646 aa17.75■□□□□ 0.43
TCF19-202ENST00000376257 MYO15BQ96JP2 1530 aa17.71■□□□□ 0.43
TCF19-202ENST00000376257 HRCP23327 699 aa17.63■□□□□ 0.41
TCF19-202ENST00000376257 ZCCHC6Q5VYS8 1495 aaKnown RBP17.6■□□□□ 0.41
TCF19-202ENST00000376257 SCRIBQ14160 1630 aa17.46■□□□□ 0.39
TCF19-202ENST00000376257 TTBK1Q5TCY1 1321 aaPredicted RBP17.4■□□□□ 0.38
TCF19-202ENST00000376257 TRIM41Q8WV44 630 aa17.39■□□□□ 0.38
TCF19-202ENST00000376257 TRIM26Q12899 539 aaPredicted RBP17.2■□□□□ 0.34
TCF19-202ENST00000376257 RB1CC1Q8TDY2 1594 aa16.99■□□□□ 0.31
TCF19-202ENST00000376257 CECR2Q9BXF3 1484 aa16.97■□□□□ 0.31
TCF19-202ENST00000376257 RANGAP1P46060 587 aaPredicted RBP16.95■□□□□ 0.3
TCF19-202ENST00000376257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.94■□□□□ 0.3
TCF19-202ENST00000376257 NACADO15069 1562 aa16.9■□□□□ 0.3
TCF19-202ENST00000376257 CCER1Q8TC90 406 aaPredicted RBP16.88■□□□□ 0.29
TCF19-202ENST00000376257 RSF1Q96T23 1441 aaPredicted RBP16.86■□□□□ 0.29
TCF19-202ENST00000376257 DCAF1Q9Y4B6 1507 aa16.86■□□□□ 0.29
TCF19-202ENST00000376257 DNAJC5BQ9UF47 199 aa16.8■□□□□ 0.28
TCF19-202ENST00000376257 UBTFP17480 764 aaKnown RBP16.76■□□□□ 0.27
TCF19-202ENST00000376257 ZEB1P37275 1124 aaPredicted RBP16.74■□□□□ 0.27
TCF19-202ENST00000376257 MROH2BQ7Z745 1585 aa16.63■□□□□ 0.25
TCF19-202ENST00000376257 YTHDC1Q96MU7 727 aaKnown RBP16.6■□□□□ 0.25
TCF19-202ENST00000376257 HNRNPUL2Q1KMD3 747 aaKnown RBP16.57■□□□□ 0.24
TCF19-202ENST00000376257 SCAF1Q9H7N4 1312 aaKnown RBP16.51■□□□□ 0.23
TCF19-202ENST00000376257 BICRAQ9NZM4 1560 aa16.5■□□□□ 0.23
TCF19-202ENST00000376257 UNC13AQ9UPW8 1703 aa16.49■□□□□ 0.23
TCF19-202ENST00000376257 WIZO95785 1651 aa16.46■□□□□ 0.22
TCF19-202ENST00000376257 DIEXFQ68CQ4 756 aaKnown RBP16.44■□□□□ 0.22
TCF19-202ENST00000376257 APLP2Q06481 763 aa16.4■□□□□ 0.22
TCF19-202ENST00000376257 NEUROD1Q13562 356 aa16.36■□□□□ 0.21
TCF19-202ENST00000376257 CSRNP3Q8WYN3 585 aa16.34■□□□□ 0.21
TCF19-202ENST00000376257 ABCC8Q09428 1581 aa16.33■□□□□ 0.21
TCF19-202ENST00000376257 GTF3C3Q9Y5Q9 886 aa16.32■□□□□ 0.2
TCF19-202ENST00000376257 ITGAEP38570 1179 aa16.3■□□□□ 0.2
TCF19-202ENST00000376257 SOGA1O94964 1423 aa16.3■□□□□ 0.2
TCF19-202ENST00000376257 CCDC88BA6NC98 1476 aa16.27■□□□□ 0.2
TCF19-202ENST00000376257 CENPBP07199 599 aaPredicted RBP16.25■□□□□ 0.19
TCF19-202ENST00000376257 BAZ1AQ9NRL2 1556 aaPredicted RBP16.24■□□□□ 0.19
TCF19-202ENST00000376257 BAZ1BQ9UIG0 1483 aaKnown RBP16.23■□□□□ 0.19
TCF19-202ENST00000376257 ACIN1Q9UKV3 1341 aaKnown RBP16.23■□□□□ 0.19
TCF19-202ENST00000376257 RUSC2Q8N2Y8 1516 aa16.2■□□□□ 0.18
TCF19-202ENST00000376257 CEP162Q5TB80 1403 aa16.19■□□□□ 0.18
TCF19-202ENST00000376257 SMARCA4P51532 1647 aa16.19■□□□□ 0.18
TCF19-202ENST00000376257 EIF4G1Q04637 1599 aaKnown RBP16.19■□□□□ 0.18
TCF19-202ENST00000376257 ATP1B4Q9UN42 357 aaPredicted RBP16.18■□□□□ 0.18
TCF19-202ENST00000376257 ATAD2BQ9ULI0 1458 aa16.18■□□□□ 0.18
TCF19-202ENST00000376257 ZNF316A6NFI3 1004 aaPredicted RBP16.12■□□□□ 0.17
TCF19-202ENST00000376257 MIER1Q8N108 512 aa16.09■□□□□ 0.17
TCF19-202ENST00000376257 CC2D2AQ9P2K1 1620 aa16.08■□□□□ 0.17
TCF19-202ENST00000376257 PELP1Q8IZL8 1130 aaKnown RBP16.07■□□□□ 0.16
TCF19-202ENST00000376257 NESP48681 1621 aa16.06■□□□□ 0.16
TCF19-202ENST00000376257 FBLN2P98095 1184 aa16■□□□□ 0.15
TCF19-202ENST00000376257 TNIKQ9UKE5 1360 aa15.98■□□□□ 0.15
TCF19-202ENST00000376257 P3H3Q8IVL6 736 aa15.96■□□□□ 0.15
TCF19-202ENST00000376257 WRNQ14191 1432 aaPredicted RBP eCLIP15.96■□□□□ 0.15
TCF19-202ENST00000376257 CLIP1P30622 1438 aa15.93■□□□□ 0.14
TCF19-202ENST00000376257 TOP2AP11388 1531 aaKnown RBP15.89■□□□□ 0.13
TCF19-202ENST00000376257 ARID3CA6NKF2 412 aa15.89■□□□□ 0.13
TCF19-202ENST00000376257 SMARCA2P51531 1590 aa15.87■□□□□ 0.13
TCF19-202ENST00000376257 GOLGA3Q08378 1498 aa15.87■□□□□ 0.13
TCF19-202ENST00000376257 KANK4Q5T7N3 995 aaPredicted RBP15.86■□□□□ 0.13
TCF19-202ENST00000376257 HIRIP3Q9BW71 556 aaPredicted RBP15.84■□□□□ 0.13
TCF19-202ENST00000376257 FAM50AQ14320 339 aaKnown RBP15.83■□□□□ 0.12
TCF19-202ENST00000376257 NCAPD3P42695 1498 aa15.81■□□□□ 0.12
TCF19-202ENST00000376257 BCANQ96GW7 911 aa15.79■□□□□ 0.12
TCF19-202ENST00000376257 RAPGEF2Q9Y4G8 1499 aa15.78■□□□□ 0.12
TCF19-202ENST00000376257 ERCC6Q03468 1493 aa15.77■□□□□ 0.12
TCF19-202ENST00000376257 CADPSQ9ULU8 1353 aa15.76■□□□□ 0.11
TCF19-202ENST00000376257 TDRD9Q8NDG6 1382 aaKnown RBP15.74■□□□□ 0.11
TCF19-202ENST00000376257 CEP164Q9UPV0 1460 aa15.73■□□□□ 0.11
TCF19-202ENST00000376257 EEA1Q15075 1411 aa15.72■□□□□ 0.11
TCF19-202ENST00000376257 CNGB1Q14028 1251 aaPredicted RBP15.69■□□□□ 0.1
TCF19-202ENST00000376257 KCNH8Q96L42 1107 aa15.67■□□□□ 0.1
TCF19-202ENST00000376257 DDX10Q13206 875 aaKnown RBP15.66■□□□□ 0.1
TCF19-202ENST00000376257 VPS8Q8N3P4 1428 aa15.66■□□□□ 0.1
TCF19-202ENST00000376257 SYNJ1O43426 1573 aa15.66■□□□□ 0.1
TCF19-202ENST00000376257 SIN3AQ96ST3 1273 aa15.65■□□□□ 0.1
TCF19-202ENST00000376257 RAD54L2Q9Y4B4 1467 aa15.65■□□□□ 0.1
TCF19-202ENST00000376257 FANCD2Q9BXW9 1451 aa15.64■□□□□ 0.09
TCF19-202ENST00000376257 TRIM52Q96A61 297 aa15.55■□□□□ 0.08
TCF19-202ENST00000376257 CUX2O14529 1486 aa15.54■□□□□ 0.08
TCF19-202ENST00000376257 CFTRP13569 1480 aa15.52■□□□□ 0.08
TCF19-202ENST00000376257 HMGXB3Q12766 1538 aa15.52■□□□□ 0.07
TCF19-202ENST00000376257 DHX57Q6P158 1386 aaKnown RBP15.51■□□□□ 0.07
TCF19-202ENST00000376257 AQRO60306 1485 aaKnown RBP eCLIP15.5■□□□□ 0.073e-6■■■■□ 21.3
TCF19-202ENST00000376257 PDS5BQ9NTI5 1447 aa15.49■□□□□ 0.07
TCF19-202ENST00000376257 KIF21BO75037 1637 aa15.49■□□□□ 0.07
TCF19-202ENST00000376257 PEG3Q9GZU2 1588 aa15.49■□□□□ 0.07
TCF19-202ENST00000376257 CHIC2Q9UKJ5 165 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms