RNA–Protein interactions for RNA: ENST00000375807.7

SECISBP2-202, Transcript of SECIS binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SECISBP2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SECISBP2-202ENST00000375807 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.49□□□□□ -0.092e-9■■■■■ 156.2
SECISBP2-202ENST00000375807 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.66□□□□□ -0.065e-7■■■■■ 112.4
SECISBP2-202ENST00000375807 SF3B1O75533 1304 aaKnown RBP eCLIP13.96□□□□□ -0.171e-6■■■■■ 65
SECISBP2-202ENST00000375807 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.59□□□□□ -0.234e-8■■■■■ 52.3
SECISBP2-202ENST00000375807 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.25□□□□□ -0.776e-7■■■■■ 35.1
SECISBP2-202ENST00000375807 EFTUD2Q15029 972 aaKnown RBP eCLIP14.33□□□□□ -0.123e-6■■■■■ 34.6
SECISBP2-202ENST00000375807 TIA1P31483 386 aaKnown RBP eCLIP13.04□□□□□ -0.322e-6■■■■■ 30.5
SECISBP2-202ENST00000375807 SRSF9Q13242 221 aaKnown RBP eCLIP10.33□□□□□ -0.762e-8■■■■■ 29.2
SECISBP2-202ENST00000375807 ZC3H11AO75152 810 aaKnown RBP eCLIP14.37□□□□□ -0.118e-7■■■■■ 28.7
SECISBP2-202ENST00000375807 SMNDC1O75940 238 aaKnown RBP eCLIP14.36□□□□□ -0.113e-6■■■■□ 26.7
SECISBP2-202ENST00000375807 PABPN1Q86U42 306 aaKnown RBP eCLIP20.36■□□□□ 0.855e-7■■■■□ 24.9
SECISBP2-202ENST00000375807 AQRO60306 1485 aaKnown RBP eCLIP19.03■□□□□ 0.644e-8■■■■□ 22.5
SECISBP2-202ENST00000375807 SF3B4Q15427 424 aaKnown RBP eCLIP13.18□□□□□ -0.32e-6■■■■□ 22.3
SECISBP2-202ENST00000375807 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.27□□□□□ -0.122e-6■■■■□ 22
SECISBP2-202ENST00000375807 HNRNPMP52272 730 aaKnown RBP eCLIP18.12■□□□□ 0.492e-6■■■■□ 20.8
SECISBP2-202ENST00000375807 RBM22Q9NW64 420 aaKnown RBP eCLIP13.67□□□□□ -0.226e-7■■■■□ 20.6
SECISBP2-202ENST00000375807 U2AF2P26368 475 aaKnown RBP eCLIP16.03■□□□□ 0.162e-7■■■■□ 20.4
SECISBP2-202ENST00000375807 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.99■□□□□ 0.317e-7■■■■□ 20.2
SECISBP2-202ENST00000375807 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.73■□□□□ 0.119e-7■■■□□ 18.5
SECISBP2-202ENST00000375807 KHSRPQ92945 711 aaKnown RBP eCLIP13.96□□□□□ -0.189e-7■■■□□ 18.4
SECISBP2-202ENST00000375807 ZNF622Q969S3 477 aaKnown RBP eCLIP14.47□□□□□ -0.092e-6■■■□□ 16.3
SECISBP2-202ENST00000375807 LSM11P83369 360 aaKnown RBP eCLIP12.88□□□□□ -0.357e-9■■■□□ 15.8
SECISBP2-202ENST00000375807 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.03■□□□□ 0.481e-6■■■□□ 14.9
SECISBP2-202ENST00000375807 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.93□□□□□ -0.52e-7■■□□□ 13.4
SECISBP2-202ENST00000375807 BCCIPQ9P287 314 aaKnown RBP eCLIP14.92□□□□□ -0.021e-6■■□□□ 12.5
SECISBP2-202ENST00000375807 HNRNPCP07910 306 aaKnown RBP eCLIP13.69□□□□□ -0.221e-9■■□□□ 12.1
SECISBP2-202ENST00000375807 PPIGQ13427 754 aaKnown RBP eCLIP13.13□□□□□ -0.314e-6■■□□□ 11.9
SECISBP2-202ENST00000375807 DDX3XO00571 662 aaKnown RBP eCLIP14.8□□□□□ -0.049e-15■■□□□ 11.9
SECISBP2-202ENST00000375807 CDC40O60508 579 aaKnown RBP eCLIP12.34□□□□□ -0.438e-7■□□□□ 10.2
SECISBP2-202ENST00000375807 FXR2P51116 673 aaKnown RBP eCLIP14.98□□□□□ -0.016e-6■□□□□ 10
SECISBP2-202ENST00000375807 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.72■□□□□ 0.112e-6■□□□□ 9.9
SECISBP2-202ENST00000375807 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.87□□□□□ -0.351e-8■□□□□ 9.5
SECISBP2-202ENST00000375807 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.86□□□□□ -0.035e-8■□□□□ 8.8
Retrieved 33 of 33 RNA–protein pairs in 29.5 ms