RNA–Protein interactions for RNA: ENST00000374987.3

APEX2-201, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APEX2, Length 3,245 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX2-201ENST00000374987 NISCHQ9Y2I1 1504 aa17.84■□□□□ 0.45
APEX2-201ENST00000374987 CHIC1Q5VXU3 224 aa17.29■□□□□ 0.36
APEX2-201ENST00000374987 AEBP2Q6ZN18 517 aaPredicted RBP16.63■□□□□ 0.25
APEX2-201ENST00000374987 PHF23Q9BUL5 403 aaPredicted RBP15.43■□□□□ 0.06
APEX2-201ENST00000374987 CCDC180Q9P1Z9 1646 aa15.33■□□□□ 0.05
APEX2-201ENST00000374987 ZCCHC6Q5VYS8 1495 aaKnown RBP15.12■□□□□ 0.01
APEX2-201ENST00000374987 SHROOM4Q9ULL8 1493 aa14.86□□□□□ -0.03
APEX2-201ENST00000374987 DCAF1Q9Y4B6 1507 aa14.78□□□□□ -0.04
APEX2-201ENST00000374987 SUPT5HO00267 1087 aaKnown RBP14.55□□□□□ -0.08
APEX2-201ENST00000374987 PLPPR3Q6T4P5 718 aa14.47□□□□□ -0.09
APEX2-201ENST00000374987 EHMT2Q96KQ7 1210 aa14.4□□□□□ -0.1
APEX2-201ENST00000374987 MYO15BQ96JP2 1530 aa14.39□□□□□ -0.11
APEX2-201ENST00000374987 DCAF8L2P0C7V8 631 aa14.36□□□□□ -0.11
APEX2-201ENST00000374987 PELP1Q8IZL8 1130 aaKnown RBP14.36□□□□□ -0.11
APEX2-201ENST00000374987 ABCC9O60706 1549 aa14.29□□□□□ -0.12
APEX2-201ENST00000374987 HRCP23327 699 aa14.15□□□□□ -0.14
APEX2-201ENST00000374987 MYT1Q01538 1121 aa14.14□□□□□ -0.15
APEX2-201ENST00000374987 SCRIBQ14160 1630 aa14.14□□□□□ -0.15
APEX2-201ENST00000374987 NACADO15069 1562 aa14.09□□□□□ -0.15
APEX2-201ENST00000374987 RSF1Q96T23 1441 aaPredicted RBP14.05□□□□□ -0.16
APEX2-201ENST00000374987 KCNA4P22459 653 aa14.01□□□□□ -0.17
APEX2-201ENST00000374987 SLC24A1O60721 1099 aa14□□□□□ -0.17
APEX2-201ENST00000374987 RB1CC1Q8TDY2 1594 aa13.98□□□□□ -0.17
APEX2-201ENST00000374987 PPARGC1BQ86YN6 1023 aaKnown RBP13.94□□□□□ -0.18
APEX2-201ENST00000374987 PCGF6Q9BYE7 350 aa13.93□□□□□ -0.18
APEX2-201ENST00000374987 CSRNP3Q8WYN3 585 aa13.83□□□□□ -0.2
APEX2-201ENST00000374987 MROH2BQ7Z745 1585 aa13.81□□□□□ -0.2
APEX2-201ENST00000374987 CECR2Q9BXF3 1484 aa13.8□□□□□ -0.2
APEX2-201ENST00000374987 PRKCSHP14314 528 aaPredicted RBP13.78□□□□□ -0.2
APEX2-201ENST00000374987 BAZ1AQ9NRL2 1556 aaPredicted RBP13.76□□□□□ -0.21
APEX2-201ENST00000374987 LOC105371045A0A1W2PR82 267 aa13.75□□□□□ -0.21
APEX2-201ENST00000374987 WIZO95785 1651 aa13.75□□□□□ -0.21
APEX2-201ENST00000374987 SENP3Q9H4L4 574 aaPredicted RBP13.74□□□□□ -0.21
APEX2-201ENST00000374987 EIF4G1Q04637 1599 aaKnown RBP13.71□□□□□ -0.21
APEX2-201ENST00000374987 UNC13AQ9UPW8 1703 aa13.68□□□□□ -0.22
APEX2-201ENST00000374987 TRIM41Q8WV44 630 aa13.65□□□□□ -0.22
APEX2-201ENST00000374987 ADRA2BP18089 450 aa13.64□□□□□ -0.23
APEX2-201ENST00000374987 TTBK1Q5TCY1 1321 aaPredicted RBP13.63□□□□□ -0.23
APEX2-201ENST00000374987 SMARCA4P51532 1647 aa13.61□□□□□ -0.23
APEX2-201ENST00000374987 TOP2AP11388 1531 aaKnown RBP13.6□□□□□ -0.23
APEX2-201ENST00000374987 TRIM26Q12899 539 aaPredicted RBP13.59□□□□□ -0.23
APEX2-201ENST00000374987 SMARCA2P51531 1590 aa13.51□□□□□ -0.25
APEX2-201ENST00000374987 SCAF1Q9H7N4 1312 aaKnown RBP13.5□□□□□ -0.25
APEX2-201ENST00000374987 BICRAQ9NZM4 1560 aa13.46□□□□□ -0.25
APEX2-201ENST00000374987 SLC4A1APQ9BWU0 796 aaKnown RBP13.46□□□□□ -0.26
APEX2-201ENST00000374987 CCDC88BA6NC98 1476 aa13.45□□□□□ -0.26
APEX2-201ENST00000374987 PEG3Q9GZU2 1588 aa13.45□□□□□ -0.26
APEX2-201ENST00000374987 FAM9AQ8IZU1 332 aaPredicted RBP13.39□□□□□ -0.27
APEX2-201ENST00000374987 RTN4Q9NQC3 1192 aaKnown RBP13.37□□□□□ -0.27
APEX2-201ENST00000374987 ABCC8Q09428 1581 aa13.37□□□□□ -0.27
APEX2-201ENST00000374987 ZEB1P37275 1124 aaPredicted RBP13.34□□□□□ -0.27
APEX2-201ENST00000374987 EEA1Q15075 1411 aa13.3□□□□□ -0.28
APEX2-201ENST00000374987 APLP2Q06481 763 aa13.28□□□□□ -0.28
APEX2-201ENST00000374987 WRNQ14191 1432 aaPredicted RBP eCLIP13.28□□□□□ -0.289e-6■■■■■ 50.1
APEX2-201ENST00000374987 ERICH6Q7L0X2 663 aa13.28□□□□□ -0.28
APEX2-201ENST00000374987 AMER1Q5JTC6 1135 aaPredicted RBP13.26□□□□□ -0.29
APEX2-201ENST00000374987 BCL11AQ9H165 835 aa13.24□□□□□ -0.29
APEX2-201ENST00000374987 TNIKQ9UKE5 1360 aa13.21□□□□□ -0.29
APEX2-201ENST00000374987 SOGA1O94964 1423 aa13.21□□□□□ -0.29
APEX2-201ENST00000374987 ATAD2BQ9ULI0 1458 aa13.2□□□□□ -0.3
APEX2-201ENST00000374987 PPP6R1Q9UPN7 881 aa13.2□□□□□ -0.3
APEX2-201ENST00000374987 CEP162Q5TB80 1403 aa13.18□□□□□ -0.3
APEX2-201ENST00000374987 PABPN1Q86U42 306 aaKnown RBP eCLIP13.17□□□□□ -0.3
APEX2-201ENST00000374987 SYNJ1O43426 1573 aa13.16□□□□□ -0.3
APEX2-201ENST00000374987 KIF21BO75037 1637 aa13.16□□□□□ -0.3
APEX2-201ENST00000374987 ACIN1Q9UKV3 1341 aaKnown RBP13.16□□□□□ -0.3
APEX2-201ENST00000374987 RUSC2Q8N2Y8 1516 aa13.15□□□□□ -0.31
APEX2-201ENST00000374987 GOLGA3Q08378 1498 aa13.14□□□□□ -0.31
APEX2-201ENST00000374987 BAZ1BQ9UIG0 1483 aaKnown RBP13.14□□□□□ -0.31
APEX2-201ENST00000374987 GTF3C3Q9Y5Q9 886 aa13.13□□□□□ -0.31
APEX2-201ENST00000374987 NEUROD1Q13562 356 aa13.11□□□□□ -0.31
APEX2-201ENST00000374987 CENPBP07199 599 aaPredicted RBP13.11□□□□□ -0.31
APEX2-201ENST00000374987 CEP164Q9UPV0 1460 aa13.08□□□□□ -0.32
APEX2-201ENST00000374987 BIVM-ERCC5R4GMW8 1640 aa13.07□□□□□ -0.32
APEX2-201ENST00000374987 TOP2BQ02880 1626 aa13.07□□□□□ -0.32
APEX2-201ENST00000374987 HMGXB3Q12766 1538 aa13.06□□□□□ -0.32
APEX2-201ENST00000374987 ZBTB22O15209 634 aa13.02□□□□□ -0.32
APEX2-201ENST00000374987 NCAPD3P42695 1498 aa12.99□□□□□ -0.33
APEX2-201ENST00000374987 UBTFP17480 764 aaKnown RBP12.95□□□□□ -0.34
APEX2-201ENST00000374987 ERICH3Q5RHP9 1530 aa12.95□□□□□ -0.34
APEX2-201ENST00000374987 PRDM2Q13029 1718 aa12.94□□□□□ -0.34
APEX2-201ENST00000374987 PPP4R3CPQ6ZMV5 832 aa12.93□□□□□ -0.34
APEX2-201ENST00000374987 CLIP1P30622 1438 aa12.93□□□□□ -0.34
APEX2-201ENST00000374987 RAPGEF2Q9Y4G8 1499 aa12.93□□□□□ -0.34
APEX2-201ENST00000374987 VPS8Q8N3P4 1428 aa12.93□□□□□ -0.34
APEX2-201ENST00000374987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.92□□□□□ -0.34
APEX2-201ENST00000374987 CCER1Q8TC90 406 aaPredicted RBP12.91□□□□□ -0.34
APEX2-201ENST00000374987 DIEXFQ68CQ4 756 aaKnown RBP12.9□□□□□ -0.34
APEX2-201ENST00000374987 PRXQ9BXM0 1461 aa12.89□□□□□ -0.35
APEX2-201ENST00000374987 CUX1P39880 1505 aa12.88□□□□□ -0.35
APEX2-201ENST00000374987 CFTRP13569 1480 aa12.87□□□□□ -0.35
APEX2-201ENST00000374987 YTHDC1Q96MU7 727 aaKnown RBP12.86□□□□□ -0.35
APEX2-201ENST00000374987 DAXXQ9UER7 740 aaPredicted RBP12.81□□□□□ -0.36
APEX2-201ENST00000374987 NCBP3Q53F19 620 aaKnown RBP12.81□□□□□ -0.36
APEX2-201ENST00000374987 NPM3O75607 178 aaKnown RBP12.79□□□□□ -0.36
APEX2-201ENST00000374987 ARAP1Q96P48 1450 aa12.79□□□□□ -0.36
APEX2-201ENST00000374987 KIF27Q86VH2 1401 aa12.78□□□□□ -0.36
APEX2-201ENST00000374987 FOXD1Q16676 465 aa12.72□□□□□ -0.37
APEX2-201ENST00000374987 CADPSQ9ULU8 1353 aa12.67□□□□□ -0.38
APEX2-201ENST00000374987 ARHGAP35Q9NRY4 1499 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms