RNA–Protein interactions for RNA: ENST00000374884.2

SPIN4-201, Transcript of spindlin family member 4, humanhuman

APPRIS P1 BASIC

Gene SPIN4, Length 4,117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4-201ENST00000374884 NISCHQ9Y2I1 1504 aa16.67■□□□□ 0.26
SPIN4-201ENST00000374884 SUPT5HO00267 1087 aaKnown RBP15.86■□□□□ 0.13
SPIN4-201ENST00000374884 DCAF8L2P0C7V8 631 aa15.7■□□□□ 0.1
SPIN4-201ENST00000374884 SHROOM4Q9ULL8 1493 aa15.62■□□□□ 0.09
SPIN4-201ENST00000374884 PCGF6Q9BYE7 350 aa15.43■□□□□ 0.06
SPIN4-201ENST00000374884 HRCP23327 699 aa15.24■□□□□ 0.03
SPIN4-201ENST00000374884 PELP1Q8IZL8 1130 aaKnown RBP15.23■□□□□ 0.03
SPIN4-201ENST00000374884 ZEB1P37275 1124 aaPredicted RBP15.04■□□□□ -0
SPIN4-201ENST00000374884 EHMT2Q96KQ7 1210 aa14.94□□□□□ -0.02
SPIN4-201ENST00000374884 PPARGC1BQ86YN6 1023 aaKnown RBP14.88□□□□□ -0.03
SPIN4-201ENST00000374884 CHIC1Q5VXU3 224 aa14.85□□□□□ -0.03
SPIN4-201ENST00000374884 TRIM26Q12899 539 aaPredicted RBP14.84□□□□□ -0.03
SPIN4-201ENST00000374884 CENPBP07199 599 aaPredicted RBP14.84□□□□□ -0.03
SPIN4-201ENST00000374884 MYT1Q01538 1121 aa14.84□□□□□ -0.03
SPIN4-201ENST00000374884 FAM9AQ8IZU1 332 aaPredicted RBP14.81□□□□□ -0.04
SPIN4-201ENST00000374884 CCER1Q8TC90 406 aaPredicted RBP14.69□□□□□ -0.06
SPIN4-201ENST00000374884 LOC105371045A0A1W2PR82 267 aa14.68□□□□□ -0.06
SPIN4-201ENST00000374884 TRIM41Q8WV44 630 aa14.68□□□□□ -0.06
SPIN4-201ENST00000374884 TTBK1Q5TCY1 1321 aaPredicted RBP14.54□□□□□ -0.08
SPIN4-201ENST00000374884 APLP2Q06481 763 aa14.44□□□□□ -0.1
SPIN4-201ENST00000374884 YTHDC1Q96MU7 727 aaKnown RBP14.43□□□□□ -0.1
SPIN4-201ENST00000374884 DIEXFQ68CQ4 756 aaKnown RBP14.31□□□□□ -0.12
SPIN4-201ENST00000374884 ABCC9O60706 1549 aa14.3□□□□□ -0.12
SPIN4-201ENST00000374884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.27□□□□□ -0.13
SPIN4-201ENST00000374884 GTF3C3Q9Y5Q9 886 aa14.27□□□□□ -0.13
SPIN4-201ENST00000374884 DCAF1Q9Y4B6 1507 aa14.25□□□□□ -0.13
SPIN4-201ENST00000374884 ACIN1Q9UKV3 1341 aaKnown RBP14.23□□□□□ -0.13
SPIN4-201ENST00000374884 UBTFP17480 764 aaKnown RBP14.22□□□□□ -0.13
SPIN4-201ENST00000374884 SCAF1Q9H7N4 1312 aaKnown RBP14.16□□□□□ -0.14
SPIN4-201ENST00000374884 MYO15BQ96JP2 1530 aa14.14□□□□□ -0.15
SPIN4-201ENST00000374884 ERICH6Q7L0X2 663 aa14.12□□□□□ -0.15
SPIN4-201ENST00000374884 NEFLP07196 543 aa14.07□□□□□ -0.16
SPIN4-201ENST00000374884 RANGAP1P46060 587 aaPredicted RBP14.07□□□□□ -0.16
SPIN4-201ENST00000374884 NEUROD1Q13562 356 aa14.02□□□□□ -0.17
SPIN4-201ENST00000374884 HNRNPUL2Q1KMD3 747 aaKnown RBP14.01□□□□□ -0.17
SPIN4-201ENST00000374884 ZNF316A6NFI3 1004 aaPredicted RBP13.97□□□□□ -0.17
SPIN4-201ENST00000374884 CCDC180Q9P1Z9 1646 aa13.96□□□□□ -0.17
SPIN4-201ENST00000374884 ZCCHC6Q5VYS8 1495 aaKnown RBP13.95□□□□□ -0.18
SPIN4-201ENST00000374884 PABPN1Q86U42 306 aaKnown RBP eCLIP13.9□□□□□ -0.18
SPIN4-201ENST00000374884 ITGAEP38570 1179 aa13.74□□□□□ -0.21
SPIN4-201ENST00000374884 ATP1B4Q9UN42 357 aaPredicted RBP13.72□□□□□ -0.21
SPIN4-201ENST00000374884 CLSPNQ9HAW4 1339 aa13.71□□□□□ -0.21
SPIN4-201ENST00000374884 BCANQ96GW7 911 aa13.7□□□□□ -0.22
SPIN4-201ENST00000374884 SCRIBQ14160 1630 aa13.65□□□□□ -0.22
SPIN4-201ENST00000374884 MIER1Q8N108 512 aa13.65□□□□□ -0.22
SPIN4-201ENST00000374884 CSRNP3Q8WYN3 585 aa13.61□□□□□ -0.23
SPIN4-201ENST00000374884 CDK11AQ9UQ88 783 aaPredicted RBP13.51□□□□□ -0.25
SPIN4-201ENST00000374884 ANP32CO43423 234 aa13.5□□□□□ -0.25
SPIN4-201ENST00000374884 FKBP8Q14318 412 aa13.49□□□□□ -0.25
SPIN4-201ENST00000374884 RSF1Q96T23 1441 aaPredicted RBP13.47□□□□□ -0.25
SPIN4-201ENST00000374884 RTL5Q5HYW3 569 aaPredicted RBP13.47□□□□□ -0.25
SPIN4-201ENST00000374884 ANP32EQ9BTT0 268 aa13.44□□□□□ -0.26
SPIN4-201ENST00000374884 FAM50AQ14320 339 aaKnown RBP13.41□□□□□ -0.26
SPIN4-201ENST00000374884 CEP162Q5TB80 1403 aa13.37□□□□□ -0.27
SPIN4-201ENST00000374884 DAXXQ9UER7 740 aaPredicted RBP13.36□□□□□ -0.27
SPIN4-201ENST00000374884 RB1CC1Q8TDY2 1594 aa13.36□□□□□ -0.27
SPIN4-201ENST00000374884 SUPT16HQ9Y5B9 1047 aaKnown RBP13.35□□□□□ -0.27
SPIN4-201ENST00000374884 DDX10Q13206 875 aaKnown RBP13.35□□□□□ -0.27
SPIN4-201ENST00000374884 POLR3GLQ9BT43 218 aa13.33□□□□□ -0.27
SPIN4-201ENST00000374884 NACADO15069 1562 aa13.33□□□□□ -0.27
SPIN4-201ENST00000374884 CNGB1Q14028 1251 aaPredicted RBP13.32□□□□□ -0.28
SPIN4-201ENST00000374884 MYT1LQ9UL68 1186 aa13.29□□□□□ -0.28
SPIN4-201ENST00000374884 TRIM52Q96A61 297 aa13.29□□□□□ -0.28
SPIN4-201ENST00000374884 TNIKQ9UKE5 1360 aa13.28□□□□□ -0.28
SPIN4-201ENST00000374884 EEA1Q15075 1411 aa13.25□□□□□ -0.29
SPIN4-201ENST00000374884 CECR2Q9BXF3 1484 aa13.24□□□□□ -0.29
SPIN4-201ENST00000374884 CLIP1P30622 1438 aa13.24□□□□□ -0.29
SPIN4-201ENST00000374884 HNRNPUQ00839 825 aaKnown RBP eCLIP13.24□□□□□ -0.29
SPIN4-201ENST00000374884 BCL11AQ9H165 835 aa13.24□□□□□ -0.29
SPIN4-201ENST00000374884 ANP32AP39687 249 aaKnown RBP13.22□□□□□ -0.29
SPIN4-201ENST00000374884 GOLGA3Q08378 1498 aa13.2□□□□□ -0.3
SPIN4-201ENST00000374884 TSHZ2Q9NRE2 1034 aa13.17□□□□□ -0.3
SPIN4-201ENST00000374884 TONSLQ96HA7 1378 aa13.15□□□□□ -0.3
SPIN4-201ENST00000374884 IRX6P78412 446 aaPredicted RBP13.12□□□□□ -0.31
SPIN4-201ENST00000374884 NBR1Q14596 966 aa13.11□□□□□ -0.31
SPIN4-201ENST00000374884 HIRIP3Q9BW71 556 aaPredicted RBP13.11□□□□□ -0.31
SPIN4-201ENST00000374884 RBM19Q9Y4C8 960 aaKnown RBP13.11□□□□□ -0.31
SPIN4-201ENST00000374884 FAM9BQ8IZU0 186 aa13.08□□□□□ -0.32
SPIN4-201ENST00000374884 P3H3Q8IVL6 736 aa13.07□□□□□ -0.32
SPIN4-201ENST00000374884 ZBTB47Q9UFB7 747 aaPredicted RBP13.06□□□□□ -0.32
SPIN4-201ENST00000374884 SOGA1O94964 1423 aa13.06□□□□□ -0.32
SPIN4-201ENST00000374884 CEP164Q9UPV0 1460 aa13.06□□□□□ -0.32
SPIN4-201ENST00000374884 NPM2Q86SE8 214 aaKnown RBP13.05□□□□□ -0.32
SPIN4-201ENST00000374884 WRNQ14191 1432 aaPredicted RBP eCLIP13.05□□□□□ -0.32
SPIN4-201ENST00000374884 CCDC136Q96JN2 1154 aa13.04□□□□□ -0.32
SPIN4-201ENST00000374884 MROH2BQ7Z745 1585 aa13.03□□□□□ -0.32
SPIN4-201ENST00000374884 ZNF326Q5BKZ1 582 aaKnown RBP13□□□□□ -0.33
SPIN4-201ENST00000374884 MRS2Q9HD23 443 aa13□□□□□ -0.33
SPIN4-201ENST00000374884 EIF5BO60841 1220 aaKnown RBP12.98□□□□□ -0.33
SPIN4-201ENST00000374884 VPS8Q8N3P4 1428 aa12.97□□□□□ -0.33
SPIN4-201ENST00000374884 CCDC88BA6NC98 1476 aa12.97□□□□□ -0.33
SPIN4-201ENST00000374884 PPP4R2Q9NY27 417 aa12.96□□□□□ -0.33
SPIN4-201ENST00000374884 CCER2I3L3R5 266 aa12.96□□□□□ -0.33
SPIN4-201ENST00000374884 SIN3AQ96ST3 1273 aa12.96□□□□□ -0.34
SPIN4-201ENST00000374884 CCNB3Q8WWL7 1395 aa12.92□□□□□ -0.34
SPIN4-201ENST00000374884 EIF4G2P78344 907 aaKnown RBP eCLIP12.92□□□□□ -0.34
SPIN4-201ENST00000374884 TIMELESSQ9UNS1 1208 aa12.91□□□□□ -0.34
SPIN4-201ENST00000374884 ABCC8Q09428 1581 aa12.91□□□□□ -0.34
SPIN4-201ENST00000374884 BAZ1AQ9NRL2 1556 aaPredicted RBP12.91□□□□□ -0.34
SPIN4-201ENST00000374884 DEKP35659 375 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms