RNA–Protein interactions for RNA: ENST00000374881.2

PSMB8-201, Transcript of proteasome subunit beta 8, humanhuman

TSL 1 (best) BASIC

Gene PSMB8, Length 1,351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB8-201ENST00000374881 NISCHQ9Y2I1 1504 aa31.06■■■□□ 2.56
PSMB8-201ENST00000374881 CCDC180Q9P1Z9 1646 aa27.7■■■□□ 2.02
PSMB8-201ENST00000374881 ABCC9O60706 1549 aa27.22■■□□□ 1.95
PSMB8-201ENST00000374881 RB1CC1Q8TDY2 1594 aa26.12■■□□□ 1.77
PSMB8-201ENST00000374881 NACADO15069 1562 aa26.04■■□□□ 1.76
PSMB8-201ENST00000374881 DCAF8L2P0C7V8 631 aa25.98■■□□□ 1.75
PSMB8-201ENST00000374881 ZCCHC6Q5VYS8 1495 aaKnown RBP25.87■■□□□ 1.73
PSMB8-201ENST00000374881 MYO15BQ96JP2 1530 aa25.82■■□□□ 1.72
PSMB8-201ENST00000374881 DCAF1Q9Y4B6 1507 aa25.68■■□□□ 1.7
PSMB8-201ENST00000374881 UNC13AQ9UPW8 1703 aa25.57■■□□□ 1.68
PSMB8-201ENST00000374881 PABPN1Q86U42 306 aaKnown RBP eCLIP25.39■■□□□ 1.65
PSMB8-201ENST00000374881 BICRAQ9NZM4 1560 aa25.33■■□□□ 1.65
PSMB8-201ENST00000374881 SCRIBQ14160 1630 aa25.3■■□□□ 1.64
PSMB8-201ENST00000374881 DNAJC5BQ9UF47 199 aa25.05■■□□□ 1.6
PSMB8-201ENST00000374881 SHROOM4Q9ULL8 1493 aa25.04■■□□□ 1.6
PSMB8-201ENST00000374881 EIF4G1Q04637 1599 aaKnown RBP24.68■■□□□ 1.54
PSMB8-201ENST00000374881 CC2D2AQ9P2K1 1620 aa24.62■■□□□ 1.53
PSMB8-201ENST00000374881 CECR2Q9BXF3 1484 aa24.46■■□□□ 1.51
PSMB8-201ENST00000374881 SMARCA4P51532 1647 aa24.15■■□□□ 1.46
PSMB8-201ENST00000374881 BAZ1AQ9NRL2 1556 aaPredicted RBP24.09■■□□□ 1.45
PSMB8-201ENST00000374881 ATAD2BQ9ULI0 1458 aa24.02■■□□□ 1.44
PSMB8-201ENST00000374881 NCAPD3P42695 1498 aa24.01■■□□□ 1.43
PSMB8-201ENST00000374881 SMARCA2P51531 1590 aa24■■□□□ 1.43
PSMB8-201ENST00000374881 MROH2BQ7Z745 1585 aa23.95■■□□□ 1.42
PSMB8-201ENST00000374881 HMGXB3Q12766 1538 aa23.92■■□□□ 1.42
PSMB8-201ENST00000374881 PEG3Q9GZU2 1588 aa23.89■■□□□ 1.42
PSMB8-201ENST00000374881 BAZ1BQ9UIG0 1483 aaKnown RBP23.84■■□□□ 1.41
PSMB8-201ENST00000374881 WIZO95785 1651 aa23.7■■□□□ 1.38
PSMB8-201ENST00000374881 RSF1Q96T23 1441 aaPredicted RBP23.6■■□□□ 1.37
PSMB8-201ENST00000374881 NESP48681 1621 aa23.52■■□□□ 1.36
PSMB8-201ENST00000374881 ERCC6Q03468 1493 aa23.48■■□□□ 1.35
PSMB8-201ENST00000374881 TOP2AP11388 1531 aaKnown RBP23.44■■□□□ 1.34
PSMB8-201ENST00000374881 LAMC3Q9Y6N6 1575 aa23.42■■□□□ 1.34
PSMB8-201ENST00000374881 CADPSQ9ULU8 1353 aa23.3■■□□□ 1.32
PSMB8-201ENST00000374881 KIF21AQ7Z4S6 1674 aa23.27■■□□□ 1.32
PSMB8-201ENST00000374881 PDS5BQ9NTI5 1447 aa23.25■■□□□ 1.31
PSMB8-201ENST00000374881 CUX2O14529 1486 aa23.24■■□□□ 1.31
PSMB8-201ENST00000374881 THOC2Q8NI27 1593 aaKnown RBP23.21■■□□□ 1.31
PSMB8-201ENST00000374881 CFTRP13569 1480 aa23.15■■□□□ 1.3
PSMB8-201ENST00000374881 CCDC88BA6NC98 1476 aa23.13■■□□□ 1.29
PSMB8-201ENST00000374881 FANCD2Q9BXW9 1451 aa23.07■■□□□ 1.28
PSMB8-201ENST00000374881 CEP164Q9UPV0 1460 aa23.06■■□□□ 1.28
PSMB8-201ENST00000374881 MRC2Q9UBG0 1479 aa23.05■■□□□ 1.28
PSMB8-201ENST00000374881 PRDM2Q13029 1718 aa23.04■■□□□ 1.28
PSMB8-201ENST00000374881 WDR62O43379 1518 aa22.99■■□□□ 1.27
PSMB8-201ENST00000374881 SUPT5HO00267 1087 aaKnown RBP22.91■■□□□ 1.26
PSMB8-201ENST00000374881 URB2Q14146 1524 aaKnown RBP22.85■■□□□ 1.25
PSMB8-201ENST00000374881 TOPBP1Q92547 1522 aa22.68■■□□□ 1.22
PSMB8-201ENST00000374881 DNMBPQ6XZF7 1577 aa22.66■■□□□ 1.22
PSMB8-201ENST00000374881 ABCC8Q09428 1581 aa22.64■■□□□ 1.21
PSMB8-201ENST00000374881 DNAJC5Q9H3Z4 198 aa22.63■■□□□ 1.21
PSMB8-201ENST00000374881 IFT140Q96RY7 1462 aa22.57■■□□□ 1.2
PSMB8-201ENST00000374881 ZNF608Q9ULD9 1512 aaPredicted RBP22.5■■□□□ 1.19
PSMB8-201ENST00000374881 POLA1P09884 1462 aaPredicted RBP22.49■■□□□ 1.19
PSMB8-201ENST00000374881 CUX1P39880 1505 aa22.47■■□□□ 1.19
PSMB8-201ENST00000374881 TARBP1Q13395 1621 aaKnown RBP22.46■■□□□ 1.19
PSMB8-201ENST00000374881 EIF4G3O43432 1585 aaKnown RBP22.43■■□□□ 1.18
PSMB8-201ENST00000374881 FGD5Q6ZNL6 1462 aa22.43■■□□□ 1.18
PSMB8-201ENST00000374881 RAD54L2Q9Y4B4 1467 aa22.4■■□□□ 1.18
PSMB8-201ENST00000374881 SOGA1O94964 1423 aa22.36■■□□□ 1.17
PSMB8-201ENST00000374881 AQRO60306 1485 aaKnown RBP eCLIP22.34■■□□□ 1.17
PSMB8-201ENST00000374881 WDR97A6NE52 1622 aa22.27■■□□□ 1.16
PSMB8-201ENST00000374881 TDRD9Q8NDG6 1382 aaKnown RBP22.27■■□□□ 1.16
PSMB8-201ENST00000374881 WRNQ14191 1432 aaPredicted RBP eCLIP22.27■■□□□ 1.16
PSMB8-201ENST00000374881 SYNJ1O43426 1573 aa22.26■■□□□ 1.15
PSMB8-201ENST00000374881 BIVM-ERCC5R4GMW8 1640 aa22.26■■□□□ 1.15
PSMB8-201ENST00000374881 TOP2BQ02880 1626 aa22.26■■□□□ 1.15
PSMB8-201ENST00000374881 OSCARQ8IYS5 282 aa22.22■■□□□ 1.15
PSMB8-201ENST00000374881 CHD1O14646 1710 aa22.19■■□□□ 1.14
PSMB8-201ENST00000374881 ABCA10Q8WWZ4 1543 aa22.18■■□□□ 1.14
PSMB8-201ENST00000374881 SNAPC4Q5SXM2 1469 aa22.15■■□□□ 1.14
PSMB8-201ENST00000374881 PBRM1Q86U86 1689 aa22.14■■□□□ 1.14
PSMB8-201ENST00000374881 ABCA5Q8WWZ7 1642 aa22.14■■□□□ 1.13
PSMB8-201ENST00000374881 GRIN2BQ13224 1484 aa22.14■■□□□ 1.13
PSMB8-201ENST00000374881 GAPVD1Q14C86 1478 aa22.12■■□□□ 1.13
PSMB8-201ENST00000374881 MAGI1Q96QZ7 1491 aaPredicted RBP22.1■■□□□ 1.13
PSMB8-201ENST00000374881 FBLN2P98095 1184 aa22.09■■□□□ 1.13
PSMB8-201ENST00000374881 SYNJ2O15056 1496 aa22.01■■□□□ 1.11
PSMB8-201ENST00000374881 CHMP7Q8WUX9 453 aaPredicted RBP21.99■■□□□ 1.11
PSMB8-201ENST00000374881 RIMBP3CA6NJZ7 1639 aa21.96■■□□□ 1.11
PSMB8-201ENST00000374881 RIMBP3BA6NNM3 1639 aa21.96■■□□□ 1.11
PSMB8-201ENST00000374881 RIMBP3Q9UFD9 1639 aa21.96■■□□□ 1.11
PSMB8-201ENST00000374881 ADAMTS12P58397 1594 aa21.95■■□□□ 1.1
PSMB8-201ENST00000374881 ARHGEF11O15085 1522 aa21.92■■□□□ 1.1
PSMB8-201ENST00000374881 ERICH3Q5RHP9 1530 aa21.92■■□□□ 1.1
PSMB8-201ENST00000374881 CLASP1Q7Z460 1538 aa21.91■■□□□ 1.1
PSMB8-201ENST00000374881 TRIM41Q8WV44 630 aa21.89■■□□□ 1.1
PSMB8-201ENST00000374881 GRIN2AQ12879 1464 aa21.86■■□□□ 1.09
PSMB8-201ENST00000374881 FHAD1B1AJZ9 1412 aa21.85■■□□□ 1.09
PSMB8-201ENST00000374881 KIF27Q86VH2 1401 aa21.8■■□□□ 1.08
PSMB8-201ENST00000374881 CEP170Q5SW79 1584 aa21.78■■□□□ 1.08
PSMB8-201ENST00000374881 NUP160Q12769 1436 aa21.75■■□□□ 1.07
PSMB8-201ENST00000374881 ARAP1Q96P48 1450 aa21.75■■□□□ 1.07
PSMB8-201ENST00000374881 CUL7Q14999 1698 aa21.73■■□□□ 1.07
PSMB8-201ENST00000374881 IGF1RP08069 1367 aa21.71■■□□□ 1.07
PSMB8-201ENST00000374881 CYB5RLQ6IPT4 315 aa21.68■■□□□ 1.06
PSMB8-201ENST00000374881 SHROOM2Q13796 1616 aa21.63■■□□□ 1.05
PSMB8-201ENST00000374881 RUSC2Q8N2Y8 1516 aa21.63■■□□□ 1.05
PSMB8-201ENST00000374881 ERCC6L2Q5T890 1561 aa21.61■■□□□ 1.05
PSMB8-201ENST00000374881 CARMIL1Q5VZK9 1371 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms