RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 KIF13AQ9H1H9 1805 aa28.99■■■□□ 2.23
PFDN6-201ENST00000374606 RUSC2Q8N2Y8 1516 aa28.97■■■□□ 2.23
PFDN6-201ENST00000374606 PRG4Q92954 1404 aaPredicted RBP28.96■■■□□ 2.23
PFDN6-201ENST00000374606 FAM9AQ8IZU1 332 aaPredicted RBP28.9■■■□□ 2.22
PFDN6-201ENST00000374606 JPH4Q96JJ6 628 aa28.88■■■□□ 2.21
PFDN6-201ENST00000374606 ABCC10Q5T3U5 1492 aa28.8■■■□□ 2.2
PFDN6-201ENST00000374606 FAM69CQ0P6D2 419 aa28.78■■■□□ 2.2
PFDN6-201ENST00000374606 CSRNP3Q8WYN3 585 aa28.78■■■□□ 2.2
PFDN6-201ENST00000374606 MAPKBP1O60336 1514 aa28.78■■■□□ 2.2
PFDN6-201ENST00000374606 NPM1P06748 294 aaKnown RBP eCLIP28.77■■■□□ 2.2
PFDN6-201ENST00000374606 CUL7Q14999 1698 aa28.74■■■□□ 2.19
PFDN6-201ENST00000374606 DIP2BQ9P265 1576 aa28.72■■■□□ 2.19
PFDN6-201ENST00000374606 IGF1RP08069 1367 aa28.72■■■□□ 2.19
PFDN6-201ENST00000374606 ADCY10Q96PN6 1610 aa28.7■■■□□ 2.19
PFDN6-201ENST00000374606 KIF21BO75037 1637 aa28.69■■■□□ 2.18
PFDN6-201ENST00000374606 PRXQ9BXM0 1461 aa28.64■■■□□ 2.17
PFDN6-201ENST00000374606 KIAA0586Q9BVV6 1533 aa28.62■■■□□ 2.17
PFDN6-201ENST00000374606 KDM6BO15054 1643 aa28.61■■■□□ 2.17
PFDN6-201ENST00000374606 CARMIL1Q5VZK9 1371 aa28.61■■■□□ 2.17
PFDN6-201ENST00000374606 GOLGA3Q08378 1498 aa28.57■■■□□ 2.16
PFDN6-201ENST00000374606 RAPGEF2Q9Y4G8 1499 aa28.56■■■□□ 2.16
PFDN6-201ENST00000374606 TSPOAP1O95153 1857 aa28.53■■■□□ 2.16
PFDN6-201ENST00000374606 KDM4FA0A1W2PPD8 638 aa28.48■■■□□ 2.15
PFDN6-201ENST00000374606 EHMT2Q96KQ7 1210 aa28.47■■■□□ 2.15
PFDN6-201ENST00000374606 PTPRGP23470 1445 aa28.44■■■□□ 2.14
PFDN6-201ENST00000374606 LOC105371045A0A1W2PR82 267 aa28.41■■■□□ 2.14
PFDN6-201ENST00000374606 ABCC2Q92887 1545 aa28.38■■■□□ 2.13
PFDN6-201ENST00000374606 CARMIL2Q6F5E8 1435 aa28.37■■■□□ 2.13
PFDN6-201ENST00000374606 TNIKQ9UKE5 1360 aa28.37■■■□□ 2.13
PFDN6-201ENST00000374606 UBTFP17480 764 aaKnown RBP28.35■■■□□ 2.13
PFDN6-201ENST00000374606 TTBK1Q5TCY1 1321 aaPredicted RBP28.35■■■□□ 2.13
PFDN6-201ENST00000374606 CTTNBP2Q8WZ74 1663 aa28.34■■■□□ 2.13
PFDN6-201ENST00000374606 PLB1Q6P1J6 1458 aa28.33■■■□□ 2.13
PFDN6-201ENST00000374606 ASXL2Q76L83 1435 aa28.31■■■□□ 2.12
PFDN6-201ENST00000374606 GLI2P10070 1586 aa28.31■■■□□ 2.12
PFDN6-201ENST00000374606 PPRC1Q5VV67 1664 aaKnown RBP28.29■■■□□ 2.12
PFDN6-201ENST00000374606 IQGAP2Q13576 1575 aa28.28■■■□□ 2.12
PFDN6-201ENST00000374606 UHRF1BP1LA0JNW5 1464 aa28.27■■■□□ 2.12
PFDN6-201ENST00000374606 UACAQ9BZF9 1416 aa28.22■■■□□ 2.11
PFDN6-201ENST00000374606 ADGRL1O94910 1474 aa28.19■■■□□ 2.1
PFDN6-201ENST00000374606 DISP1Q96F81 1524 aa28.17■■■□□ 2.1
PFDN6-201ENST00000374606 EPRSP07814 1512 aaKnown RBP28.14■■■□□ 2.1
PFDN6-201ENST00000374606 KDM5BQ9UGL1 1544 aa28.13■■■□□ 2.09
PFDN6-201ENST00000374606 MAP3K4Q9Y6R4 1608 aa28.13■■■□□ 2.09
PFDN6-201ENST00000374606 CEP162Q5TB80 1403 aa28.12■■■□□ 2.09
PFDN6-201ENST00000374606 TEX14Q8IWB6 1497 aa28.12■■■□□ 2.09
PFDN6-201ENST00000374606 ILDR1Q86SU0 546 aaPredicted RBP28.11■■■□□ 2.09
PFDN6-201ENST00000374606 COL17A1Q9UMD9 1497 aaPredicted RBP28.1■■■□□ 2.09
PFDN6-201ENST00000374606 UGGT2Q9NYU1 1516 aa28.08■■■□□ 2.09
PFDN6-201ENST00000374606 ZCCHC11Q5TAX3 1644 aaKnown RBP28.08■■■□□ 2.09
PFDN6-201ENST00000374606 CLIP1P30622 1438 aa28.05■■■□□ 2.08
PFDN6-201ENST00000374606 KIAA0556O60303 1618 aa28.04■■■□□ 2.08
PFDN6-201ENST00000374606 RANGAP1P46060 587 aaPredicted RBP28.02■■■□□ 2.08
PFDN6-201ENST00000374606 EFCAB5A4FU69 1503 aa28.01■■■□□ 2.07
PFDN6-201ENST00000374606 WDR7Q9Y4E6 1490 aa27.97■■■□□ 2.07
PFDN6-201ENST00000374606 SAMD9Q5K651 1589 aa27.97■■■□□ 2.07
PFDN6-201ENST00000374606 HECW2Q9P2P5 1572 aa27.95■■■□□ 2.07
PFDN6-201ENST00000374606 ARHGAP35Q9NRY4 1499 aa27.95■■■□□ 2.06
PFDN6-201ENST00000374606 CFAP43Q8NDM7 1665 aa27.86■■■□□ 2.05
PFDN6-201ENST00000374606 MAGI3Q5TCQ9 1506 aa27.86■■■□□ 2.05
PFDN6-201ENST00000374606 CD109Q6YHK3 1445 aa27.84■■■□□ 2.05
PFDN6-201ENST00000374606 FHOD3Q2V2M9 1422 aa27.82■■■□□ 2.04
PFDN6-201ENST00000374606 ABCA8O94911 1581 aa27.81■■■□□ 2.04
PFDN6-201ENST00000374606 P3H3Q8IVL6 736 aa27.78■■■□□ 2.04
PFDN6-201ENST00000374606 KCNH8Q96L42 1107 aa27.77■■■□□ 2.04
PFDN6-201ENST00000374606 VPS8Q8N3P4 1428 aa27.73■■■□□ 2.03
PFDN6-201ENST00000374606 FMN1Q68DA7 1419 aa27.69■■■□□ 2.02
PFDN6-201ENST00000374606 ARAP3Q8WWN8 1544 aa27.65■■■□□ 2.02
PFDN6-201ENST00000374606 PCF11O94913 1555 aaKnown RBP27.64■■■□□ 2.01
PFDN6-201ENST00000374606 FYCO1Q9BQS8 1478 aa27.57■■■□□ 2
PFDN6-201ENST00000374606 CASKIN1Q8WXD9 1431 aa27.56■■■□□ 2
PFDN6-201ENST00000374606 PHLDB1Q86UU1 1377 aa27.55■■■□□ 2
PFDN6-201ENST00000374606 ATP10BO94823 1461 aa27.55■■■□□ 2
PFDN6-201ENST00000374606 RAPGEF6Q8TEU7 1601 aa27.55■■■□□ 2
PFDN6-201ENST00000374606 ARID3CA6NKF2 412 aa27.54■■■□□ 2
PFDN6-201ENST00000374606 HECW1Q76N89 1606 aa27.54■■■□□ 2
PFDN6-201ENST00000374606 ABCA9Q8IUA7 1624 aa27.54■■■□□ 2
PFDN6-201ENST00000374606 ADAMTSL3P82987 1691 aa27.51■■□□□ 1.99
PFDN6-201ENST00000374606 PTPRMP28827 1452 aa27.49■■□□□ 1.99
PFDN6-201ENST00000374606 FBXO41Q8TF61 875 aa27.48■■□□□ 1.99
PFDN6-201ENST00000374606 NEO1Q92859 1461 aa27.46■■□□□ 1.99
PFDN6-201ENST00000374606 RAPGEF3O95398 923 aa27.43■■□□□ 1.98
PFDN6-201ENST00000374606 ATP1B4Q9UN42 357 aaPredicted RBP27.43■■□□□ 1.98
PFDN6-201ENST00000374606 LRRIQ1Q96JM4 1722 aa27.42■■□□□ 1.98
PFDN6-201ENST00000374606 NUP153P49790 1475 aaKnown RBP27.42■■□□□ 1.98
PFDN6-201ENST00000374606 CCDC18Q5T9S5 1454 aa27.4■■□□□ 1.98
PFDN6-201ENST00000374606 BCORL1Q5H9F3 1711 aa27.4■■□□□ 1.98
PFDN6-201ENST00000374606 APLP2Q06481 763 aa27.39■■□□□ 1.98
PFDN6-201ENST00000374606 TIAM1Q13009 1591 aa27.39■■□□□ 1.97
PFDN6-201ENST00000374606 FRMPD1Q5SYB0 1578 aa27.39■■□□□ 1.97
PFDN6-201ENST00000374606 MAP3K1Q13233 1512 aa27.37■■□□□ 1.97
PFDN6-201ENST00000374606 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.36■■□□□ 1.97
PFDN6-201ENST00000374606 HNRNPUL2Q1KMD3 747 aaKnown RBP27.36■■□□□ 1.97
PFDN6-201ENST00000374606 MADDQ8WXG6 1647 aa27.36■■□□□ 1.97
PFDN6-201ENST00000374606 ARID4BQ4LE39 1312 aaPredicted RBP27.35■■□□□ 1.97
PFDN6-201ENST00000374606 CDK13Q14004 1512 aaKnown RBP27.33■■□□□ 1.97
PFDN6-201ENST00000374606 ARHGEF40Q8TER5 1519 aa27.31■■□□□ 1.96
PFDN6-201ENST00000374606 LMTK3Q96Q04 1460 aa27.28■■□□□ 1.96
PFDN6-201ENST00000374606 DENND4BO75064 1496 aaPredicted RBP27.26■■□□□ 1.95
PFDN6-201ENST00000374606 RIMS1Q86UR5 1692 aaKnown RBP27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms