RNA–Protein interactions for RNA: ENST00000374212.4

SLC31A1-201, Transcript of solute carrier family 31 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC31A1, Length 4,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC31A1-201ENST00000374212 SF3B1O75533 1304 aaKnown RBP eCLIP8.64□□□□□ -1.036e-6■■■■■ 128.7
SLC31A1-201ENST00000374212 RPS3P23396 243 aaKnown RBP eCLIP8.27□□□□□ -1.091e-10■■■■■ 70.8
SLC31A1-201ENST00000374212 FUBP3Q96I24 572 aaKnown RBP eCLIP8.51□□□□□ -1.054e-15■■■■■ 39.2
SLC31A1-201ENST00000374212 QKIQ96PU8 341 aaKnown RBP eCLIP8.65□□□□□ -1.023e-9■■■■■ 37.6
SLC31A1-201ENST00000374212 AQRO60306 1485 aaKnown RBP eCLIP12.55□□□□□ -0.42e-8■■■■■ 35.8
SLC31A1-201ENST00000374212 SF3B4Q15427 424 aaKnown RBP eCLIP7.43□□□□□ -1.223e-10■■■■■ 34.4
SLC31A1-201ENST00000374212 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.35□□□□□ -1.071e-26■■■■■ 33.9
SLC31A1-201ENST00000374212 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.99□□□□□ -0.971e-7■■■■■ 30.1
SLC31A1-201ENST00000374212 YBX3P16989 372 aaKnown RBP eCLIP8.88□□□□□ -0.994e-8■■■■■ 27.4
SLC31A1-201ENST00000374212 SND1Q7KZF4 910 aaKnown RBP eCLIP8.97□□□□□ -0.972e-12■■■■□ 25.4
SLC31A1-201ENST00000374212 RBFOX2O43251 390 aaKnown RBP eCLIP6.91□□□□□ -1.33e-7■■■■□ 24.9
SLC31A1-201ENST00000374212 UPF1Q92900 1129 aaKnown RBP eCLIP8.9□□□□□ -0.982e-8■■■■□ 22.6
SLC31A1-201ENST00000374212 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.6□□□□□ -1.036e-8■■■■□ 21.8
SLC31A1-201ENST00000374212 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.38□□□□□ -0.435e-7■■■■□ 19.8
SLC31A1-201ENST00000374212 AKAP1Q92667 903 aaKnown RBP eCLIP7.47□□□□□ -1.216e-7■■■□□ 18.7
SLC31A1-201ENST00000374212 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.21□□□□□ -1.422e-6■■■□□ 16.9
SLC31A1-201ENST00000374212 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.65□□□□□ -0.865e-6■■■□□ 16.9
SLC31A1-201ENST00000374212 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.37□□□□□ -1.071e-6■■■□□ 16.6
SLC31A1-201ENST00000374212 HNRNPCP07910 306 aaKnown RBP eCLIP7.69□□□□□ -1.183e-7■■□□□ 12.8
SLC31A1-201ENST00000374212 G3BP1Q13283 466 aaKnown RBP eCLIP10.12□□□□□ -0.796e-9■■□□□ 12.6
SLC31A1-201ENST00000374212 FTOQ9C0B1 505 aaKnown RBP eCLIP9.69□□□□□ -0.863e-6■■□□□ 11.8
SLC31A1-201ENST00000374212 IGF2BP3O00425 579 aaKnown RBP eCLIP8.69□□□□□ -1.022e-6■□□□□ 11
SLC31A1-201ENST00000374212 DDX6P26196 483 aaKnown RBP eCLIP8.24□□□□□ -1.092e-6■□□□□ 10.7
SLC31A1-201ENST00000374212 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.04□□□□□ -0.965e-6■□□□□ 10.2
SLC31A1-201ENST00000374212 DDX3XO00571 662 aaKnown RBP eCLIP9.05□□□□□ -0.969e-18■□□□□ 10
SLC31A1-201ENST00000374212 CPSF6Q16630 551 aaKnown RBP eCLIP8.1□□□□□ -1.112e-7■□□□□ 9.1
SLC31A1-201ENST00000374212 TIA1P31483 386 aaKnown RBP eCLIP8.03□□□□□ -1.121e-6■□□□□ 9.1
Retrieved 27 of 27 RNA–protein pairs in 9.8 ms