RNA–Protein interactions for RNA: ENST00000373322.1

LRSAM1-203, Transcript of leucine rich repeat and sterile alpha motif containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRSAM1, Length 2,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRSAM1-203ENST00000373322 NISCHQ9Y2I1 1504 aa30.76■■■□□ 2.51
LRSAM1-203ENST00000373322 CCDC180Q9P1Z9 1646 aa26.41■■□□□ 1.82
LRSAM1-203ENST00000373322 ZCCHC6Q5VYS8 1495 aaKnown RBP25.88■■□□□ 1.73
LRSAM1-203ENST00000373322 SHROOM4Q9ULL8 1493 aa25.85■■□□□ 1.73
LRSAM1-203ENST00000373322 DCAF8L2P0C7V8 631 aa25.8■■□□□ 1.72
LRSAM1-203ENST00000373322 DCAF1Q9Y4B6 1507 aa25.2■■□□□ 1.63
LRSAM1-203ENST00000373322 ABCC9O60706 1549 aa25.08■■□□□ 1.61
LRSAM1-203ENST00000373322 SUPT5HO00267 1087 aaKnown RBP25.06■■□□□ 1.6
LRSAM1-203ENST00000373322 SCRIBQ14160 1630 aa24.7■■□□□ 1.55
LRSAM1-203ENST00000373322 MYO15BQ96JP2 1530 aa24.7■■□□□ 1.54
LRSAM1-203ENST00000373322 NACADO15069 1562 aa24.59■■□□□ 1.53
LRSAM1-203ENST00000373322 RB1CC1Q8TDY2 1594 aa24.34■■□□□ 1.49
LRSAM1-203ENST00000373322 RSF1Q96T23 1441 aaPredicted RBP24.11■■□□□ 1.45
LRSAM1-203ENST00000373322 CECR2Q9BXF3 1484 aa24.06■■□□□ 1.44
LRSAM1-203ENST00000373322 CHIC1Q5VXU3 224 aa24.01■■□□□ 1.43
LRSAM1-203ENST00000373322 UNC13AQ9UPW8 1703 aa23.91■■□□□ 1.42
LRSAM1-203ENST00000373322 MROH2BQ7Z745 1585 aa23.89■■□□□ 1.42
LRSAM1-203ENST00000373322 PABPN1Q86U42 306 aaKnown RBP eCLIP23.88■■□□□ 1.413e-6■■■□□ 15.4
LRSAM1-203ENST00000373322 WIZO95785 1651 aa23.73■■□□□ 1.39
LRSAM1-203ENST00000373322 BAZ1AQ9NRL2 1556 aaPredicted RBP23.67■■□□□ 1.38
LRSAM1-203ENST00000373322 BICRAQ9NZM4 1560 aa23.67■■□□□ 1.38
LRSAM1-203ENST00000373322 SMARCA4P51532 1647 aa23.55■■□□□ 1.36
LRSAM1-203ENST00000373322 TRIM41Q8WV44 630 aa23.37■■□□□ 1.33
LRSAM1-203ENST00000373322 TOP2AP11388 1531 aaKnown RBP23.33■■□□□ 1.33
LRSAM1-203ENST00000373322 LOC105371045A0A1W2PR82 267 aa23.31■■□□□ 1.32
LRSAM1-203ENST00000373322 CCDC88BA6NC98 1476 aa23.24■■□□□ 1.31
LRSAM1-203ENST00000373322 FAM9AQ8IZU1 332 aaPredicted RBP23.19■■□□□ 1.3
LRSAM1-203ENST00000373322 SMARCA2P51531 1590 aa23.19■■□□□ 1.3
LRSAM1-203ENST00000373322 HRCP23327 699 aa23.14■■□□□ 1.29
LRSAM1-203ENST00000373322 ATAD2BQ9ULI0 1458 aa23.11■■□□□ 1.29
LRSAM1-203ENST00000373322 PEG3Q9GZU2 1588 aa23.1■■□□□ 1.29
LRSAM1-203ENST00000373322 PCGF6Q9BYE7 350 aa23.09■■□□□ 1.29
LRSAM1-203ENST00000373322 EIF4G1Q04637 1599 aaKnown RBP23.07■■□□□ 1.28
LRSAM1-203ENST00000373322 EHMT2Q96KQ7 1210 aa23.04■■□□□ 1.28
LRSAM1-203ENST00000373322 BAZ1BQ9UIG0 1483 aaKnown RBP23.03■■□□□ 1.28
LRSAM1-203ENST00000373322 ABCC8Q09428 1581 aa22.99■■□□□ 1.27
LRSAM1-203ENST00000373322 NCAPD3P42695 1498 aa22.76■■□□□ 1.23
LRSAM1-203ENST00000373322 PPARGC1BQ86YN6 1023 aaKnown RBP22.71■■□□□ 1.23
LRSAM1-203ENST00000373322 HMGXB3Q12766 1538 aa22.69■■□□□ 1.22
LRSAM1-203ENST00000373322 WRNQ14191 1432 aaPredicted RBP eCLIP22.68■■□□□ 1.22
LRSAM1-203ENST00000373322 SOGA1O94964 1423 aa22.66■■□□□ 1.22
LRSAM1-203ENST00000373322 RUSC2Q8N2Y8 1516 aa22.58■■□□□ 1.2
LRSAM1-203ENST00000373322 SYNJ1O43426 1573 aa22.57■■□□□ 1.2
LRSAM1-203ENST00000373322 TRIM26Q12899 539 aaPredicted RBP22.55■■□□□ 1.2
LRSAM1-203ENST00000373322 CC2D2AQ9P2K1 1620 aa22.54■■□□□ 1.2
LRSAM1-203ENST00000373322 CSRNP3Q8WYN3 585 aa22.48■■□□□ 1.19
LRSAM1-203ENST00000373322 CFTRP13569 1480 aa22.41■■□□□ 1.18
LRSAM1-203ENST00000373322 EEA1Q15075 1411 aa22.39■■□□□ 1.17
LRSAM1-203ENST00000373322 UBTFP17480 764 aaKnown RBP22.38■■□□□ 1.17
LRSAM1-203ENST00000373322 TOP2BQ02880 1626 aa22.33■■□□□ 1.17
LRSAM1-203ENST00000373322 CADPSQ9ULU8 1353 aa22.31■■□□□ 1.16
LRSAM1-203ENST00000373322 CUX1P39880 1505 aa22.28■■□□□ 1.16
LRSAM1-203ENST00000373322 CEP162Q5TB80 1403 aa22.24■■□□□ 1.15
LRSAM1-203ENST00000373322 BIVM-ERCC5R4GMW8 1640 aa22.24■■□□□ 1.15
LRSAM1-203ENST00000373322 TNIKQ9UKE5 1360 aa22.24■■□□□ 1.15
LRSAM1-203ENST00000373322 GOLGA3Q08378 1498 aa22.23■■□□□ 1.15
LRSAM1-203ENST00000373322 DNAJC5BQ9UF47 199 aa22.21■■□□□ 1.15
LRSAM1-203ENST00000373322 CEP164Q9UPV0 1460 aa22.17■■□□□ 1.14
LRSAM1-203ENST00000373322 RANGAP1P46060 587 aaPredicted RBP22.15■■□□□ 1.14
LRSAM1-203ENST00000373322 NESP48681 1621 aa22.14■■□□□ 1.14
LRSAM1-203ENST00000373322 PRDM2Q13029 1718 aa22.13■■□□□ 1.13
LRSAM1-203ENST00000373322 RAPGEF2Q9Y4G8 1499 aa22.13■■□□□ 1.13
LRSAM1-203ENST00000373322 TTBK1Q5TCY1 1321 aaPredicted RBP22.12■■□□□ 1.13
LRSAM1-203ENST00000373322 KIF21BO75037 1637 aa22.1■■□□□ 1.13
LRSAM1-203ENST00000373322 FANCD2Q9BXW9 1451 aa22.09■■□□□ 1.13
LRSAM1-203ENST00000373322 ZEB1P37275 1124 aaPredicted RBP22.09■■□□□ 1.13
LRSAM1-203ENST00000373322 KIF27Q86VH2 1401 aa22.04■■□□□ 1.12
LRSAM1-203ENST00000373322 FGD5Q6ZNL6 1462 aa22■■□□□ 1.11
LRSAM1-203ENST00000373322 CUX2O14529 1486 aa21.97■■□□□ 1.11
LRSAM1-203ENST00000373322 CLIP1P30622 1438 aa21.97■■□□□ 1.11
LRSAM1-203ENST00000373322 PRXQ9BXM0 1461 aa21.95■■□□□ 1.1
LRSAM1-203ENST00000373322 LAMC3Q9Y6N6 1575 aa21.88■■□□□ 1.09
LRSAM1-203ENST00000373322 RAD54L2Q9Y4B4 1467 aa21.87■■□□□ 1.09
LRSAM1-203ENST00000373322 ERICH3Q5RHP9 1530 aa21.86■■□□□ 1.09
LRSAM1-203ENST00000373322 TOPBP1Q92547 1522 aa21.86■■□□□ 1.09
LRSAM1-203ENST00000373322 IGF1RP08069 1367 aa21.86■■□□□ 1.09
LRSAM1-203ENST00000373322 DNMBPQ6XZF7 1577 aa21.84■■□□□ 1.09
LRSAM1-203ENST00000373322 POLA1P09884 1462 aaPredicted RBP21.82■■□□□ 1.08
LRSAM1-203ENST00000373322 PDS5BQ9NTI5 1447 aa21.8■■□□□ 1.08
LRSAM1-203ENST00000373322 URB2Q14146 1524 aaKnown RBP21.79■■□□□ 1.08
LRSAM1-203ENST00000373322 VPS8Q8N3P4 1428 aa21.77■■□□□ 1.08
LRSAM1-203ENST00000373322 CARMIL1Q5VZK9 1371 aa21.76■■□□□ 1.07
LRSAM1-203ENST00000373322 APLP2Q06481 763 aa21.72■■□□□ 1.07
LRSAM1-203ENST00000373322 KIF21AQ7Z4S6 1674 aa21.72■■□□□ 1.07
LRSAM1-203ENST00000373322 ABCA10Q8WWZ4 1543 aa21.7■■□□□ 1.06
LRSAM1-203ENST00000373322 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.7■■□□□ 1.06
LRSAM1-203ENST00000373322 ARAP1Q96P48 1450 aa21.67■■□□□ 1.06
LRSAM1-203ENST00000373322 TDRD9Q8NDG6 1382 aaKnown RBP21.67■■□□□ 1.06
LRSAM1-203ENST00000373322 CCER1Q8TC90 406 aaPredicted RBP21.63■■□□□ 1.05
LRSAM1-203ENST00000373322 ARHGAP35Q9NRY4 1499 aa21.6■■□□□ 1.05
LRSAM1-203ENST00000373322 P3H3Q8IVL6 736 aa21.56■■□□□ 1.04
LRSAM1-203ENST00000373322 KANK4Q5T7N3 995 aaPredicted RBP21.52■■□□□ 1.04
LRSAM1-203ENST00000373322 WDR97A6NE52 1622 aa21.52■■□□□ 1.03
LRSAM1-203ENST00000373322 GAPVD1Q14C86 1478 aa21.52■■□□□ 1.03
LRSAM1-203ENST00000373322 HNRNPUL2Q1KMD3 747 aaKnown RBP21.51■■□□□ 1.03
LRSAM1-203ENST00000373322 MRC2Q9UBG0 1479 aa21.48■■□□□ 1.03
LRSAM1-203ENST00000373322 ABCA5Q8WWZ7 1642 aa21.46■■□□□ 1.03
LRSAM1-203ENST00000373322 CUL7Q14999 1698 aa21.45■■□□□ 1.03
LRSAM1-203ENST00000373322 TARBP1Q13395 1621 aaKnown RBP21.44■■□□□ 1.02
LRSAM1-203ENST00000373322 SCAF1Q9H7N4 1312 aaKnown RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms