RNA–Protein interactions for RNA: ENST00000373292.8

HDLBP-202, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-202ENST00000373292 NISCHQ9Y2I1 1504 aa24.96■■□□□ 1.59
HDLBP-202ENST00000373292 CCDC180Q9P1Z9 1646 aa21.49■■□□□ 1.03
HDLBP-202ENST00000373292 ZCCHC6Q5VYS8 1495 aaKnown RBP20.98■□□□□ 0.95
HDLBP-202ENST00000373292 DCAF8L2P0C7V8 631 aa20.86■□□□□ 0.93
HDLBP-202ENST00000373292 SHROOM4Q9ULL8 1493 aa20.84■□□□□ 0.93
HDLBP-202ENST00000373292 ABCC9O60706 1549 aa20.56■□□□□ 0.88
HDLBP-202ENST00000373292 DCAF1Q9Y4B6 1507 aa20.42■□□□□ 0.86
HDLBP-202ENST00000373292 SCRIBQ14160 1630 aa20.11■□□□□ 0.81
HDLBP-202ENST00000373292 SUPT5HO00267 1087 aaKnown RBP20.06■□□□□ 0.8
HDLBP-202ENST00000373292 MYO15BQ96JP2 1530 aa20.06■□□□□ 0.8
HDLBP-202ENST00000373292 NACADO15069 1562 aa20■□□□□ 0.79
HDLBP-202ENST00000373292 RB1CC1Q8TDY2 1594 aa19.83■□□□□ 0.76
HDLBP-202ENST00000373292 UNC13AQ9UPW8 1703 aa19.7■□□□□ 0.74
HDLBP-202ENST00000373292 CECR2Q9BXF3 1484 aa19.61■□□□□ 0.73
HDLBP-202ENST00000373292 PABPN1Q86U42 306 aaKnown RBP eCLIP19.55■□□□□ 0.725e-8■■□□□ 12.5
HDLBP-202ENST00000373292 RSF1Q96T23 1441 aaPredicted RBP19.52■□□□□ 0.71
HDLBP-202ENST00000373292 BICRAQ9NZM4 1560 aa19.46■□□□□ 0.71
HDLBP-202ENST00000373292 MROH2BQ7Z745 1585 aa19.44■□□□□ 0.7
HDLBP-202ENST00000373292 WIZO95785 1651 aa19.31■□□□□ 0.68
HDLBP-202ENST00000373292 CHIC1Q5VXU3 224 aa19.19■□□□□ 0.66
HDLBP-202ENST00000373292 BAZ1AQ9NRL2 1556 aaPredicted RBP19.16■□□□□ 0.66
HDLBP-202ENST00000373292 SMARCA4P51532 1647 aa19.16■□□□□ 0.66
HDLBP-202ENST00000373292 TOP2AP11388 1531 aaKnown RBP18.89■□□□□ 0.61
HDLBP-202ENST00000373292 CCDC88BA6NC98 1476 aa18.85■□□□□ 0.61
HDLBP-202ENST00000373292 ATAD2BQ9ULI0 1458 aa18.83■□□□□ 0.6
HDLBP-202ENST00000373292 SMARCA2P51531 1590 aa18.83■□□□□ 0.6
HDLBP-202ENST00000373292 PEG3Q9GZU2 1588 aa18.81■□□□□ 0.6
HDLBP-202ENST00000373292 EIF4G1Q04637 1599 aaKnown RBP18.79■□□□□ 0.6
HDLBP-202ENST00000373292 BAZ1BQ9UIG0 1483 aaKnown RBP18.69■□□□□ 0.58
HDLBP-202ENST00000373292 LOC105371045A0A1W2PR82 267 aa18.67■□□□□ 0.58
HDLBP-202ENST00000373292 TRIM41Q8WV44 630 aa18.66■□□□□ 0.58
HDLBP-202ENST00000373292 ABCC8Q09428 1581 aa18.64■□□□□ 0.57
HDLBP-202ENST00000373292 FAM9AQ8IZU1 332 aaPredicted RBP18.58■□□□□ 0.56
HDLBP-202ENST00000373292 NCAPD3P42695 1498 aa18.55■□□□□ 0.56
HDLBP-202ENST00000373292 CC2D2AQ9P2K1 1620 aa18.52■□□□□ 0.56
HDLBP-202ENST00000373292 EHMT2Q96KQ7 1210 aa18.5■□□□□ 0.55
HDLBP-202ENST00000373292 HMGXB3Q12766 1538 aa18.47■□□□□ 0.55
HDLBP-202ENST00000373292 DNAJC5BQ9UF47 199 aa18.45■□□□□ 0.54
HDLBP-202ENST00000373292 SYNJ1O43426 1573 aa18.32■□□□□ 0.52
HDLBP-202ENST00000373292 RUSC2Q8N2Y8 1516 aa18.32■□□□□ 0.52
HDLBP-202ENST00000373292 SOGA1O94964 1423 aa18.31■□□□□ 0.52
HDLBP-202ENST00000373292 WRNQ14191 1432 aaPredicted RBP eCLIP18.29■□□□□ 0.52
HDLBP-202ENST00000373292 CFTRP13569 1480 aa18.23■□□□□ 0.51
HDLBP-202ENST00000373292 NESP48681 1621 aa18.18■□□□□ 0.5
HDLBP-202ENST00000373292 CADPSQ9ULU8 1353 aa18.14■□□□□ 0.49
HDLBP-202ENST00000373292 CUX1P39880 1505 aa18.12■□□□□ 0.49
HDLBP-202ENST00000373292 TOP2BQ02880 1626 aa18.09■□□□□ 0.49
HDLBP-202ENST00000373292 PRDM2Q13029 1718 aa18.04■□□□□ 0.48
HDLBP-202ENST00000373292 BIVM-ERCC5R4GMW8 1640 aa18.04■□□□□ 0.48
HDLBP-202ENST00000373292 CSRNP3Q8WYN3 585 aa18.02■□□□□ 0.48
HDLBP-202ENST00000373292 FANCD2Q9BXW9 1451 aa17.97■□□□□ 0.47
HDLBP-202ENST00000373292 PPARGC1BQ86YN6 1023 aaKnown RBP17.89■□□□□ 0.45
HDLBP-202ENST00000373292 EEA1Q15075 1411 aa17.87■□□□□ 0.45
HDLBP-202ENST00000373292 PCGF6Q9BYE7 350 aa17.87■□□□□ 0.45
HDLBP-202ENST00000373292 RAPGEF2Q9Y4G8 1499 aa17.87■□□□□ 0.45
HDLBP-202ENST00000373292 UBTFP17480 764 aaKnown RBP17.87■□□□□ 0.45
HDLBP-202ENST00000373292 FGD5Q6ZNL6 1462 aa17.86■□□□□ 0.45
HDLBP-202ENST00000373292 LAMC3Q9Y6N6 1575 aa17.84■□□□□ 0.45
HDLBP-202ENST00000373292 KIF21AQ7Z4S6 1674 aa17.84■□□□□ 0.45
HDLBP-202ENST00000373292 RAD54L2Q9Y4B4 1467 aa17.82■□□□□ 0.44
HDLBP-202ENST00000373292 URB2Q14146 1524 aaKnown RBP17.82■□□□□ 0.44
HDLBP-202ENST00000373292 CEP162Q5TB80 1403 aa17.81■□□□□ 0.44
HDLBP-202ENST00000373292 RANGAP1P46060 587 aaPredicted RBP17.8■□□□□ 0.44
HDLBP-202ENST00000373292 TOPBP1Q92547 1522 aa17.8■□□□□ 0.44
HDLBP-202ENST00000373292 GOLGA3Q08378 1498 aa17.79■□□□□ 0.44
HDLBP-202ENST00000373292 TNIKQ9UKE5 1360 aa17.79■□□□□ 0.44
HDLBP-202ENST00000373292 CEP164Q9UPV0 1460 aa17.78■□□□□ 0.44
HDLBP-202ENST00000373292 KIF21BO75037 1637 aa17.77■□□□□ 0.44
HDLBP-202ENST00000373292 CUX2O14529 1486 aa17.77■□□□□ 0.44
HDLBP-202ENST00000373292 POLA1P09884 1462 aaPredicted RBP17.76■□□□□ 0.43
HDLBP-202ENST00000373292 DNMBPQ6XZF7 1577 aa17.75■□□□□ 0.43
HDLBP-202ENST00000373292 PRXQ9BXM0 1461 aa17.73■□□□□ 0.43
HDLBP-202ENST00000373292 KIF27Q86VH2 1401 aa17.73■□□□□ 0.43
HDLBP-202ENST00000373292 IGF1RP08069 1367 aa17.71■□□□□ 0.43
HDLBP-202ENST00000373292 PDS5BQ9NTI5 1447 aa17.7■□□□□ 0.42
HDLBP-202ENST00000373292 TTBK1Q5TCY1 1321 aaPredicted RBP17.69■□□□□ 0.42
HDLBP-202ENST00000373292 TDRD9Q8NDG6 1382 aaKnown RBP17.63■□□□□ 0.41
HDLBP-202ENST00000373292 ABCA10Q8WWZ4 1543 aa17.61■□□□□ 0.41
HDLBP-202ENST00000373292 CLIP1P30622 1438 aa17.59■□□□□ 0.41
HDLBP-202ENST00000373292 TRIM26Q12899 539 aaPredicted RBP17.59■□□□□ 0.41
HDLBP-202ENST00000373292 ERICH3Q5RHP9 1530 aa17.59■□□□□ 0.41
HDLBP-202ENST00000373292 WDR97A6NE52 1622 aa17.58■□□□□ 0.4
HDLBP-202ENST00000373292 CARMIL1Q5VZK9 1371 aa17.56■□□□□ 0.4
HDLBP-202ENST00000373292 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
HDLBP-202ENST00000373292 MRC2Q9UBG0 1479 aa17.51■□□□□ 0.39
HDLBP-202ENST00000373292 AQRO60306 1485 aaKnown RBP eCLIP17.49■□□□□ 0.393e-8■■■■■ 32.6
HDLBP-202ENST00000373292 ABCA5Q8WWZ7 1642 aa17.49■□□□□ 0.39
HDLBP-202ENST00000373292 ARAP1Q96P48 1450 aa17.48■□□□□ 0.39
HDLBP-202ENST00000373292 ZNF608Q9ULD9 1512 aaPredicted RBP17.47■□□□□ 0.39
HDLBP-202ENST00000373292 GAPVD1Q14C86 1478 aa17.46■□□□□ 0.39
HDLBP-202ENST00000373292 ERCC6Q03468 1493 aa17.46■□□□□ 0.38
HDLBP-202ENST00000373292 ARHGAP35Q9NRY4 1499 aa17.44■□□□□ 0.38
HDLBP-202ENST00000373292 WDR62O43379 1518 aa17.43■□□□□ 0.38
HDLBP-202ENST00000373292 VPS8Q8N3P4 1428 aa17.42■□□□□ 0.38
HDLBP-202ENST00000373292 THOC2Q8NI27 1593 aaKnown RBP17.42■□□□□ 0.38
HDLBP-202ENST00000373292 P3H3Q8IVL6 736 aa17.41■□□□□ 0.38
HDLBP-202ENST00000373292 CUL7Q14999 1698 aa17.35■□□□□ 0.37
HDLBP-202ENST00000373292 PBRM1Q86U86 1689 aa17.35■□□□□ 0.37
HDLBP-202ENST00000373292 KANK4Q5T7N3 995 aaPredicted RBP17.34■□□□□ 0.37
HDLBP-202ENST00000373292 HRCP23327 699 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms