RNA–Protein interactions for RNA: ENST00000372792.6

CAP1-202, Transcript of cyclase associated actin cytoskeleton regulatory protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAP1, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAP1-202ENST00000372792 NISCHQ9Y2I1 1504 aa22.74■■□□□ 1.23
CAP1-202ENST00000372792 CCDC180Q9P1Z9 1646 aa19.65■□□□□ 0.74
CAP1-202ENST00000372792 ZCCHC6Q5VYS8 1495 aaKnown RBP19.23■□□□□ 0.67
CAP1-202ENST00000372792 DCAF1Q9Y4B6 1507 aa18.89■□□□□ 0.61
CAP1-202ENST00000372792 SHROOM4Q9ULL8 1493 aa18.76■□□□□ 0.59
CAP1-202ENST00000372792 AEBP2Q6ZN18 517 aaPredicted RBP18.68■□□□□ 0.58
CAP1-202ENST00000372792 MYO15BQ96JP2 1530 aa18.47■□□□□ 0.55
CAP1-202ENST00000372792 DCAF8L2P0C7V8 631 aa18.39■□□□□ 0.54
CAP1-202ENST00000372792 SUPT5HO00267 1087 aaKnown RBP18.33■□□□□ 0.52
CAP1-202ENST00000372792 NACADO15069 1562 aa18.14■□□□□ 0.49
CAP1-202ENST00000372792 ABCC9O60706 1549 aa18.12■□□□□ 0.49
CAP1-202ENST00000372792 SCRIBQ14160 1630 aa18.02■□□□□ 0.48
CAP1-202ENST00000372792 CHIC1Q5VXU3 224 aa17.93■□□□□ 0.46
CAP1-202ENST00000372792 RB1CC1Q8TDY2 1594 aa17.83■□□□□ 0.44
CAP1-202ENST00000372792 RSF1Q96T23 1441 aaPredicted RBP17.82■□□□□ 0.44
CAP1-202ENST00000372792 CECR2Q9BXF3 1484 aa17.56■□□□□ 0.4
CAP1-202ENST00000372792 MROH2BQ7Z745 1585 aa17.55■□□□□ 0.4
CAP1-202ENST00000372792 BAZ1AQ9NRL2 1556 aaPredicted RBP17.52■□□□□ 0.4
CAP1-202ENST00000372792 UNC13AQ9UPW8 1703 aa17.49■□□□□ 0.39
CAP1-202ENST00000372792 WIZO95785 1651 aa17.44■□□□□ 0.38
CAP1-202ENST00000372792 SMARCA4P51532 1647 aa17.37■□□□□ 0.37
CAP1-202ENST00000372792 TOP2AP11388 1531 aaKnown RBP17.32■□□□□ 0.36
CAP1-202ENST00000372792 EIF4G1Q04637 1599 aaKnown RBP17.29■□□□□ 0.36
CAP1-202ENST00000372792 BICRAQ9NZM4 1560 aa17.27■□□□□ 0.36
CAP1-202ENST00000372792 TRIM41Q8WV44 630 aa17.25■□□□□ 0.35
CAP1-202ENST00000372792 PEG3Q9GZU2 1588 aa17.19■□□□□ 0.34
CAP1-202ENST00000372792 LOC105371045A0A1W2PR82 267 aa17.18■□□□□ 0.34
CAP1-202ENST00000372792 SMARCA2P51531 1590 aa17.16■□□□□ 0.34
CAP1-202ENST00000372792 CCDC88BA6NC98 1476 aa17.11■□□□□ 0.33
CAP1-202ENST00000372792 HRCP23327 699 aa17.03■□□□□ 0.32
CAP1-202ENST00000372792 PCGF6Q9BYE7 350 aa16.97■□□□□ 0.31
CAP1-202ENST00000372792 PABPN1Q86U42 306 aaKnown RBP eCLIP16.96■□□□□ 0.31
CAP1-202ENST00000372792 TRIM26Q12899 539 aaPredicted RBP16.93■□□□□ 0.3
CAP1-202ENST00000372792 ATAD2BQ9ULI0 1458 aa16.92■□□□□ 0.3
CAP1-202ENST00000372792 EEA1Q15075 1411 aa16.89■□□□□ 0.29
CAP1-202ENST00000372792 ABCC8Q09428 1581 aa16.89■□□□□ 0.29
CAP1-202ENST00000372792 FAM9AQ8IZU1 332 aaPredicted RBP16.87■□□□□ 0.29
CAP1-202ENST00000372792 BAZ1BQ9UIG0 1483 aaKnown RBP16.86■□□□□ 0.29
CAP1-202ENST00000372792 HMGXB3Q12766 1538 aa16.77■□□□□ 0.27
CAP1-202ENST00000372792 WRNQ14191 1432 aaPredicted RBP eCLIP16.75■□□□□ 0.272e-8■■■□□ 16.7
CAP1-202ENST00000372792 NCAPD3P42695 1498 aa16.71■□□□□ 0.27
CAP1-202ENST00000372792 TNIKQ9UKE5 1360 aa16.69■□□□□ 0.26
CAP1-202ENST00000372792 SYNJ1O43426 1573 aa16.67■□□□□ 0.26
CAP1-202ENST00000372792 SOGA1O94964 1423 aa16.67■□□□□ 0.26
CAP1-202ENST00000372792 CSRNP3Q8WYN3 585 aa16.64■□□□□ 0.25
CAP1-202ENST00000372792 GOLGA3Q08378 1498 aa16.63■□□□□ 0.25
CAP1-202ENST00000372792 KIF21BO75037 1637 aa16.63■□□□□ 0.25
CAP1-202ENST00000372792 ZEB1P37275 1124 aaPredicted RBP16.61■□□□□ 0.25
CAP1-202ENST00000372792 TOP2BQ02880 1626 aa16.6■□□□□ 0.25
CAP1-202ENST00000372792 BIVM-ERCC5R4GMW8 1640 aa16.6■□□□□ 0.25
CAP1-202ENST00000372792 CEP162Q5TB80 1403 aa16.6■□□□□ 0.25
CAP1-202ENST00000372792 CEP164Q9UPV0 1460 aa16.59■□□□□ 0.25
CAP1-202ENST00000372792 RUSC2Q8N2Y8 1516 aa16.57■□□□□ 0.24
CAP1-202ENST00000372792 EHMT2Q96KQ7 1210 aa16.53■□□□□ 0.24
CAP1-202ENST00000372792 PRDM2Q13029 1718 aa16.52■□□□□ 0.23
CAP1-202ENST00000372792 CFTRP13569 1480 aa16.48■□□□□ 0.23
CAP1-202ENST00000372792 UBTFP17480 764 aaKnown RBP16.42■□□□□ 0.22
CAP1-202ENST00000372792 PPARGC1BQ86YN6 1023 aaKnown RBP16.42■□□□□ 0.22
CAP1-202ENST00000372792 ERICH3Q5RHP9 1530 aa16.41■□□□□ 0.22
CAP1-202ENST00000372792 CUX1P39880 1505 aa16.39■□□□□ 0.21
CAP1-202ENST00000372792 CLIP1P30622 1438 aa16.34■□□□□ 0.21
CAP1-202ENST00000372792 PRXQ9BXM0 1461 aa16.34■□□□□ 0.21
CAP1-202ENST00000372792 RAPGEF2Q9Y4G8 1499 aa16.33■□□□□ 0.21
CAP1-202ENST00000372792 VPS8Q8N3P4 1428 aa16.31■□□□□ 0.2
CAP1-202ENST00000372792 KIF27Q86VH2 1401 aa16.3■□□□□ 0.2
CAP1-202ENST00000372792 CADPSQ9ULU8 1353 aa16.3■□□□□ 0.2
CAP1-202ENST00000372792 CC2D2AQ9P2K1 1620 aa16.29■□□□□ 0.2
CAP1-202ENST00000372792 ARAP1Q96P48 1450 aa16.14■□□□□ 0.17
CAP1-202ENST00000372792 FGD5Q6ZNL6 1462 aa16.12■□□□□ 0.17
CAP1-202ENST00000372792 DNMBPQ6XZF7 1577 aa16.12■□□□□ 0.17
CAP1-202ENST00000372792 CCER1Q8TC90 406 aaPredicted RBP16.11■□□□□ 0.17
CAP1-202ENST00000372792 FANCD2Q9BXW9 1451 aa16.11■□□□□ 0.17
CAP1-202ENST00000372792 CUX2O14529 1486 aa16.1■□□□□ 0.17
CAP1-202ENST00000372792 APLP2Q06481 763 aa16.1■□□□□ 0.17
CAP1-202ENST00000372792 LAMC3Q9Y6N6 1575 aa16.07■□□□□ 0.16
CAP1-202ENST00000372792 IGF1RP08069 1367 aa16.07■□□□□ 0.16
CAP1-202ENST00000372792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.07■□□□□ 0.16
CAP1-202ENST00000372792 SENP3Q9H4L4 574 aaPredicted RBP16.04■□□□□ 0.16
CAP1-202ENST00000372792 ARHGAP35Q9NRY4 1499 aa16.03■□□□□ 0.16
CAP1-202ENST00000372792 ABCA10Q8WWZ4 1543 aa16.02■□□□□ 0.16
CAP1-202ENST00000372792 MAP3K1Q13233 1512 aa16.01■□□□□ 0.15
CAP1-202ENST00000372792 TOPBP1Q92547 1522 aa16.01■□□□□ 0.15
CAP1-202ENST00000372792 CARMIL1Q5VZK9 1371 aa16.01■□□□□ 0.15
CAP1-202ENST00000372792 TTBK1Q5TCY1 1321 aaPredicted RBP16■□□□□ 0.15
CAP1-202ENST00000372792 CUL7Q14999 1698 aa15.99■□□□□ 0.15
CAP1-202ENST00000372792 POLA1P09884 1462 aaPredicted RBP15.96■□□□□ 0.15
CAP1-202ENST00000372792 WDR97A6NE52 1622 aa15.95■□□□□ 0.14
CAP1-202ENST00000372792 RRBP1Q9P2E9 1410 aaKnown RBP15.93■□□□□ 0.14
CAP1-202ENST00000372792 NESP48681 1621 aa15.91■□□□□ 0.14
CAP1-202ENST00000372792 PDS5BQ9NTI5 1447 aa15.9■□□□□ 0.14
CAP1-202ENST00000372792 EFCAB5A4FU69 1503 aa15.9■□□□□ 0.14
CAP1-202ENST00000372792 FHAD1B1AJZ9 1412 aa15.89■□□□□ 0.13
CAP1-202ENST00000372792 CLSPNQ9HAW4 1339 aa15.88■□□□□ 0.13
CAP1-202ENST00000372792 URB2Q14146 1524 aaKnown RBP15.88■□□□□ 0.13
CAP1-202ENST00000372792 TIAM1Q13009 1591 aa15.88■□□□□ 0.13
CAP1-202ENST00000372792 RANGAP1P46060 587 aaPredicted RBP15.87■□□□□ 0.13
CAP1-202ENST00000372792 CTTNBP2Q8WZ74 1663 aa15.87■□□□□ 0.13
CAP1-202ENST00000372792 RAD54L2Q9Y4B4 1467 aa15.87■□□□□ 0.13
CAP1-202ENST00000372792 ABCA5Q8WWZ7 1642 aa15.86■□□□□ 0.13
CAP1-202ENST00000372792 HNRNPUL2Q1KMD3 747 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms