RNA–Protein interactions for RNA: ENST00000372596.5

SCMH1-206, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SCMH1, Length 3,323 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-206ENST00000372596 NISCHQ9Y2I1 1504 aa18.54■□□□□ 0.56
SCMH1-206ENST00000372596 ABCC9O60706 1549 aa16.44■□□□□ 0.22
SCMH1-206ENST00000372596 SHROOM4Q9ULL8 1493 aa16.29■□□□□ 0.2
SCMH1-206ENST00000372596 HRCP23327 699 aa16.29■□□□□ 0.2
SCMH1-206ENST00000372596 DCAF8L2P0C7V8 631 aa16.27■□□□□ 0.2
SCMH1-206ENST00000372596 PELP1Q8IZL8 1130 aaKnown RBP16.27■□□□□ 0.19
SCMH1-206ENST00000372596 CCDC180Q9P1Z9 1646 aa16.21■□□□□ 0.19
SCMH1-206ENST00000372596 SUPT5HO00267 1087 aaKnown RBP16■□□□□ 0.15
SCMH1-206ENST00000372596 PPARGC1BQ86YN6 1023 aaKnown RBP15.86■□□□□ 0.13
SCMH1-206ENST00000372596 MYT1Q01538 1121 aa15.75■□□□□ 0.11
SCMH1-206ENST00000372596 PCGF6Q9BYE7 350 aa15.65■□□□□ 0.1
SCMH1-206ENST00000372596 SCAF1Q9H7N4 1312 aaKnown RBP15.62■□□□□ 0.09
SCMH1-206ENST00000372596 MYO15BQ96JP2 1530 aa15.59■□□□□ 0.09
SCMH1-206ENST00000372596 PABPN1Q86U42 306 aaKnown RBP eCLIP15.55■□□□□ 0.08
SCMH1-206ENST00000372596 RB1CC1Q8TDY2 1594 aa15.46■□□□□ 0.07
SCMH1-206ENST00000372596 ZCCHC6Q5VYS8 1495 aaKnown RBP15.42■□□□□ 0.06
SCMH1-206ENST00000372596 NACADO15069 1562 aa15.36■□□□□ 0.05
SCMH1-206ENST00000372596 DCAF1Q9Y4B6 1507 aa15.33■□□□□ 0.05
SCMH1-206ENST00000372596 CHIC1Q5VXU3 224 aa15.25■□□□□ 0.03
SCMH1-206ENST00000372596 SCRIBQ14160 1630 aa15.24■□□□□ 0.03
SCMH1-206ENST00000372596 ZEB1P37275 1124 aaPredicted RBP15.12■□□□□ 0.01
SCMH1-206ENST00000372596 TRIM26Q12899 539 aaPredicted RBP15.12■□□□□ 0.01
SCMH1-206ENST00000372596 DNAJC5BQ9UF47 199 aa15.12■□□□□ 0.01
SCMH1-206ENST00000372596 ACIN1Q9UKV3 1341 aaKnown RBP15.1■□□□□ 0.01
SCMH1-206ENST00000372596 UNC13AQ9UPW8 1703 aa15.06■□□□□ 0
SCMH1-206ENST00000372596 NEUROD1Q13562 356 aa15.02■□□□□ -0
SCMH1-206ENST00000372596 EHMT2Q96KQ7 1210 aa15.02■□□□□ -0
SCMH1-206ENST00000372596 LOC105371045A0A1W2PR82 267 aa15□□□□□ -0.01
SCMH1-206ENST00000372596 BICRAQ9NZM4 1560 aa14.97□□□□□ -0.01
SCMH1-206ENST00000372596 GTF3C3Q9Y5Q9 886 aa14.94□□□□□ -0.02
SCMH1-206ENST00000372596 TTBK1Q5TCY1 1321 aaPredicted RBP14.94□□□□□ -0.02
SCMH1-206ENST00000372596 FAM9AQ8IZU1 332 aaPredicted RBP14.9□□□□□ -0.02
SCMH1-206ENST00000372596 CENPBP07199 599 aaPredicted RBP14.76□□□□□ -0.05
SCMH1-206ENST00000372596 TRIM41Q8WV44 630 aa14.73□□□□□ -0.05
SCMH1-206ENST00000372596 BCL11AQ9H165 835 aa14.68□□□□□ -0.06
SCMH1-206ENST00000372596 EIF4G1Q04637 1599 aaKnown RBP14.66□□□□□ -0.06
SCMH1-206ENST00000372596 CECR2Q9BXF3 1484 aa14.64□□□□□ -0.07
SCMH1-206ENST00000372596 CC2D2AQ9P2K1 1620 aa14.64□□□□□ -0.07
SCMH1-206ENST00000372596 RSF1Q96T23 1441 aaPredicted RBP14.62□□□□□ -0.07
SCMH1-206ENST00000372596 DIEXFQ68CQ4 756 aaKnown RBP14.58□□□□□ -0.08
SCMH1-206ENST00000372596 ANP32EQ9BTT0 268 aa14.44□□□□□ -0.1
SCMH1-206ENST00000372596 MROH2BQ7Z745 1585 aa14.41□□□□□ -0.1
SCMH1-206ENST00000372596 PRKCSHP14314 528 aaPredicted RBP14.4□□□□□ -0.1
SCMH1-206ENST00000372596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.36□□□□□ -0.11
SCMH1-206ENST00000372596 SMARCA4P51532 1647 aa14.36□□□□□ -0.11
SCMH1-206ENST00000372596 BAZ1AQ9NRL2 1556 aaPredicted RBP14.35□□□□□ -0.11
SCMH1-206ENST00000372596 ATAD2BQ9ULI0 1458 aa14.35□□□□□ -0.11
SCMH1-206ENST00000372596 CCER1Q8TC90 406 aaPredicted RBP14.32□□□□□ -0.12
SCMH1-206ENST00000372596 BAZ1BQ9UIG0 1483 aaKnown RBP14.31□□□□□ -0.12
SCMH1-206ENST00000372596 CSRNP3Q8WYN3 585 aa14.29□□□□□ -0.12
SCMH1-206ENST00000372596 WIZO95785 1651 aa14.28□□□□□ -0.12
SCMH1-206ENST00000372596 YTHDC1Q96MU7 727 aaKnown RBP14.28□□□□□ -0.12
SCMH1-206ENST00000372596 SMARCA2P51531 1590 aa14.24□□□□□ -0.13
SCMH1-206ENST00000372596 NCAPD3P42695 1498 aa14.24□□□□□ -0.13
SCMH1-206ENST00000372596 TSHZ2Q9NRE2 1034 aa14.24□□□□□ -0.13
SCMH1-206ENST00000372596 ZNF316A6NFI3 1004 aaPredicted RBP14.23□□□□□ -0.13
SCMH1-206ENST00000372596 RANGAP1P46060 587 aaPredicted RBP14.21□□□□□ -0.13
SCMH1-206ENST00000372596 MIER1Q8N108 512 aa14.19□□□□□ -0.14
SCMH1-206ENST00000372596 NESP48681 1621 aa14.19□□□□□ -0.14
SCMH1-206ENST00000372596 SUPT16HQ9Y5B9 1047 aaKnown RBP14.18□□□□□ -0.14
SCMH1-206ENST00000372596 CLSPNQ9HAW4 1339 aa14.18□□□□□ -0.14
SCMH1-206ENST00000372596 ERCC6Q03468 1493 aa14.16□□□□□ -0.14
SCMH1-206ENST00000372596 UBTFP17480 764 aaKnown RBP14.16□□□□□ -0.14
SCMH1-206ENST00000372596 HMGXB3Q12766 1538 aa14.08□□□□□ -0.15
SCMH1-206ENST00000372596 ABCC8Q09428 1581 aa14.08□□□□□ -0.16
SCMH1-206ENST00000372596 CCDC88BA6NC98 1476 aa14.03□□□□□ -0.16
SCMH1-206ENST00000372596 ERICH6Q7L0X2 663 aa14.02□□□□□ -0.17
SCMH1-206ENST00000372596 PEG3Q9GZU2 1588 aa14.02□□□□□ -0.17
SCMH1-206ENST00000372596 APLP2Q06481 763 aa13.98□□□□□ -0.17
SCMH1-206ENST00000372596 SOGA1O94964 1423 aa13.98□□□□□ -0.17
SCMH1-206ENST00000372596 CADPSQ9ULU8 1353 aa13.97□□□□□ -0.17
SCMH1-206ENST00000372596 TOP2AP11388 1531 aaKnown RBP13.96□□□□□ -0.18
SCMH1-206ENST00000372596 RUSC2Q8N2Y8 1516 aa13.91□□□□□ -0.18
SCMH1-206ENST00000372596 PDS5BQ9NTI5 1447 aa13.91□□□□□ -0.18
SCMH1-206ENST00000372596 WRNQ14191 1432 aaPredicted RBP eCLIP13.9□□□□□ -0.19
SCMH1-206ENST00000372596 HNRNPUL2Q1KMD3 747 aaKnown RBP13.87□□□□□ -0.19
SCMH1-206ENST00000372596 FANCD2Q9BXW9 1451 aa13.84□□□□□ -0.19
SCMH1-206ENST00000372596 CEP162Q5TB80 1403 aa13.84□□□□□ -0.19
SCMH1-206ENST00000372596 RBM19Q9Y4C8 960 aaKnown RBP13.84□□□□□ -0.19
SCMH1-206ENST00000372596 LAMC3Q9Y6N6 1575 aa13.83□□□□□ -0.2
SCMH1-206ENST00000372596 KIF21AQ7Z4S6 1674 aa13.82□□□□□ -0.2
SCMH1-206ENST00000372596 CEP164Q9UPV0 1460 aa13.81□□□□□ -0.2
SCMH1-206ENST00000372596 MSH5O43196 834 aa13.8□□□□□ -0.2
SCMH1-206ENST00000372596 CFTRP13569 1480 aa13.79□□□□□ -0.2
SCMH1-206ENST00000372596 TNIKQ9UKE5 1360 aa13.71□□□□□ -0.21
SCMH1-206ENST00000372596 MRC2Q9UBG0 1479 aa13.71□□□□□ -0.21
SCMH1-206ENST00000372596 ANO8Q9HCE9 1232 aaPredicted RBP13.7□□□□□ -0.22
SCMH1-206ENST00000372596 FBLN2P98095 1184 aa13.7□□□□□ -0.22
SCMH1-206ENST00000372596 BCANQ96GW7 911 aa13.68□□□□□ -0.22
SCMH1-206ENST00000372596 URB2Q14146 1524 aaKnown RBP13.66□□□□□ -0.22
SCMH1-206ENST00000372596 GOLGA3Q08378 1498 aa13.66□□□□□ -0.22
SCMH1-206ENST00000372596 FANCIQ9NVI1 1328 aa13.66□□□□□ -0.22
SCMH1-206ENST00000372596 THOC2Q8NI27 1593 aaKnown RBP13.66□□□□□ -0.22
SCMH1-206ENST00000372596 ITGAEP38570 1179 aa13.65□□□□□ -0.22
SCMH1-206ENST00000372596 CUX2O14529 1486 aa13.65□□□□□ -0.22
SCMH1-206ENST00000372596 FKBP8Q14318 412 aa13.64□□□□□ -0.23
SCMH1-206ENST00000372596 MYT1LQ9UL68 1186 aa13.64□□□□□ -0.23
SCMH1-206ENST00000372596 CLIP1P30622 1438 aa13.63□□□□□ -0.23
SCMH1-206ENST00000372596 ATP1B4Q9UN42 357 aaPredicted RBP13.62□□□□□ -0.23
SCMH1-206ENST00000372596 SYNJ1O43426 1573 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms