RNA–Protein interactions for RNA: ENST00000372554.8

SH3GLB2-201, Transcript of SH3 domain containing GRB2 like, endophilin B2, humanhuman

TSL 1 (best) BASIC

Gene SH3GLB2, Length 1,985 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GLB2-201ENST00000372554 SF3A3Q12874 501 aaKnown RBP eCLIP29.29■■■□□ 2.287e-15■■■■■ 27.5
SH3GLB2-201ENST00000372554 NONOQ15233 471 aaKnown RBP eCLIP32.25■■■□□ 2.756e-14■■■□□ 18.1
SH3GLB2-201ENST00000372554 DDX3XO00571 662 aaKnown RBP eCLIP30.84■■■□□ 2.533e-13■■■□□ 17.9
SH3GLB2-201ENST00000372554 AKAP1Q92667 903 aaKnown RBP eCLIP25.15■■□□□ 1.622e-10■■□□□ 13.4
SH3GLB2-201ENST00000372554 NKRFO15226 690 aaKnown RBP eCLIP31.5■■■□□ 2.631e-9■■□□□ 11.8
SH3GLB2-201ENST00000372554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP42.06■■■■■ 4.322e-9■□□□□ 10.1
SH3GLB2-201ENST00000372554 SRSF1Q07955 248 aaKnown RBP eCLIP22.15■■□□□ 1.143e-9■□□□□ 10.4
SH3GLB2-201ENST00000372554 PRPF4O43172 522 aaKnown RBP eCLIP29.34■■■□□ 2.294e-9■■□□□ 12.1
SH3GLB2-201ENST00000372554 QKIQ96PU8 341 aaKnown RBP eCLIP29.44■■■□□ 2.37e-9■■■■■ 36.4
SH3GLB2-201ENST00000372554 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.1■■■□□ 2.251e-8■■■□□ 17.5
SH3GLB2-201ENST00000372554 PABPN1Q86U42 306 aaKnown RBP eCLIP47.55■■■■■ 5.22e-8■■■■■ 31.1
SH3GLB2-201ENST00000372554 UPF1Q92900 1129 aaKnown RBP eCLIP31.1■■■□□ 2.573e-8■■■□□ 18.7
SH3GLB2-201ENST00000372554 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.17■■■□□ 2.587e-8■■■□□ 17.9
SH3GLB2-201ENST00000372554 UTP3Q9NQZ2 479 aaKnown RBP eCLIP30.73■■■□□ 2.518e-8■■■□□ 18.3
SH3GLB2-201ENST00000372554 ZC3H11AO75152 810 aaKnown RBP eCLIP30.61■■■□□ 2.491e-7■■□□□ 14
SH3GLB2-201ENST00000372554 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP40.57■■■■■ 4.082e-7■□□□□ 9.3
SH3GLB2-201ENST00000372554 RPS3P23396 243 aaKnown RBP eCLIP28.13■■■□□ 2.092e-7■■□□□ 13.2
SH3GLB2-201ENST00000372554 LSM11P83369 360 aaKnown RBP eCLIP26.51■■□□□ 1.833e-7■■■■□ 19.6
SH3GLB2-201ENST00000372554 GTF2F1P35269 517 aaKnown RBP eCLIP31.84■■■□□ 2.694e-7■■□□□ 13.7
SH3GLB2-201ENST00000372554 NCBP2P52298 156 aaKnown RBP eCLIP26.91■■□□□ 1.95e-7■■■■□ 19.5
SH3GLB2-201ENST00000372554 EFTUD2Q15029 972 aaKnown RBP eCLIP29.41■■■□□ 2.37e-7■■■■□ 19.6
SH3GLB2-201ENST00000372554 DDX24Q9GZR7 859 aaKnown RBP eCLIP33.77■■■■□ 37e-7■■■□□ 14.7
SH3GLB2-201ENST00000372554 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.88■■□□□ 1.097e-7■□□□□ 9.8
SH3GLB2-201ENST00000372554 PPIGQ13427 754 aaKnown RBP eCLIP28.26■■■□□ 2.119e-7■■■■□ 21.8
SH3GLB2-201ENST00000372554 SF3B1O75533 1304 aaKnown RBP eCLIP29.35■■■□□ 2.291e-6■■■■■ 51.7
SH3GLB2-201ENST00000372554 RBFOX2O43251 390 aaKnown RBP eCLIP23.43■■□□□ 1.341e-6■■■■□ 20.3
SH3GLB2-201ENST00000372554 PABPC4Q13310 644 aaKnown RBP eCLIP31.54■■■□□ 2.641e-6■■□□□ 14.3
SH3GLB2-201ENST00000372554 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.54■■■□□ 2.482e-6■■□□□ 12.5
SH3GLB2-201ENST00000372554 DDX6P26196 483 aaKnown RBP eCLIP28.19■■■□□ 2.12e-6■□□□□ 11.1
SH3GLB2-201ENST00000372554 TROVE2P10155 538 aaKnown RBP eCLIP28.99■■■□□ 2.232e-6■■□□□ 12
SH3GLB2-201ENST00000372554 AQRO60306 1485 aaKnown RBP eCLIP42.91■■■■■ 4.462e-6■■■■□ 21.8
SH3GLB2-201ENST00000372554 NIPBLQ6KC79 2804 aaeCLIP20.41■□□□□ 0.863e-6■■□□□ 11.7
SH3GLB2-201ENST00000372554 SF3B4Q15427 424 aaKnown RBP eCLIP24.98■■□□□ 1.593e-6■■■■■ 34.9
SH3GLB2-201ENST00000372554 HNRNPKP61978 463 aaKnown RBP eCLIP26.46■■□□□ 1.835e-6■■□□□ 11.6
SH3GLB2-201ENST00000372554 METAP2P50579 478 aaKnown RBP eCLIP33.24■■■□□ 2.916e-6■□□□□ 10.3
SH3GLB2-201ENST00000372554 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP26.52■■□□□ 1.846e-6■■□□□ 14.4
Retrieved 36 of 36 RNA–protein pairs in 7.3 ms