RNA–Protein interactions for RNA: ENST00000371946.8

MKNK1-204, Transcript of MAP kinase interacting serine/threonine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene MKNK1, Length 2,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKNK1-204ENST00000371946 NISCHQ9Y2I1 1504 aa31.37■■■□□ 2.61
MKNK1-204ENST00000371946 CCDC180Q9P1Z9 1646 aa26.96■■□□□ 1.91
MKNK1-204ENST00000371946 ZCCHC6Q5VYS8 1495 aaKnown RBP26.46■■□□□ 1.83
MKNK1-204ENST00000371946 SHROOM4Q9ULL8 1493 aa26.17■■□□□ 1.78
MKNK1-204ENST00000371946 DCAF8L2P0C7V8 631 aa25.89■■□□□ 1.74
MKNK1-204ENST00000371946 DCAF1Q9Y4B6 1507 aa25.87■■□□□ 1.73
MKNK1-204ENST00000371946 SUPT5HO00267 1087 aaKnown RBP25.49■■□□□ 1.67
MKNK1-204ENST00000371946 MYO15BQ96JP2 1530 aa25.33■■□□□ 1.64
MKNK1-204ENST00000371946 ABCC9O60706 1549 aa25.14■■□□□ 1.61
MKNK1-204ENST00000371946 NACADO15069 1562 aa25.03■■□□□ 1.6
MKNK1-204ENST00000371946 SCRIBQ14160 1630 aa25■■□□□ 1.59
MKNK1-204ENST00000371946 RB1CC1Q8TDY2 1594 aa24.68■■□□□ 1.54
MKNK1-204ENST00000371946 CHIC1Q5VXU3 224 aa24.68■■□□□ 1.54
MKNK1-204ENST00000371946 RSF1Q96T23 1441 aaPredicted RBP24.62■■□□□ 1.53
MKNK1-204ENST00000371946 CECR2Q9BXF3 1484 aa24.39■■□□□ 1.49
MKNK1-204ENST00000371946 MROH2BQ7Z745 1585 aa24.29■■□□□ 1.48
MKNK1-204ENST00000371946 BAZ1AQ9NRL2 1556 aaPredicted RBP24.15■■□□□ 1.46
MKNK1-204ENST00000371946 UNC13AQ9UPW8 1703 aa24.14■■□□□ 1.46
MKNK1-204ENST00000371946 WIZO95785 1651 aa24.1■■□□□ 1.45
MKNK1-204ENST00000371946 SMARCA4P51532 1647 aa23.96■■□□□ 1.43
MKNK1-204ENST00000371946 BICRAQ9NZM4 1560 aa23.94■■□□□ 1.42
MKNK1-204ENST00000371946 PABPN1Q86U42 306 aaKnown RBP eCLIP23.9■■□□□ 1.42
MKNK1-204ENST00000371946 TRIM41Q8WV44 630 aa23.89■■□□□ 1.41
MKNK1-204ENST00000371946 TOP2AP11388 1531 aaKnown RBP23.85■■□□□ 1.41
MKNK1-204ENST00000371946 LOC105371045A0A1W2PR82 267 aa23.81■■□□□ 1.4
MKNK1-204ENST00000371946 CCDC88BA6NC98 1476 aa23.67■■□□□ 1.38
MKNK1-204ENST00000371946 EIF4G1Q04637 1599 aaKnown RBP23.67■■□□□ 1.38
MKNK1-204ENST00000371946 SMARCA2P51531 1590 aa23.65■■□□□ 1.38
MKNK1-204ENST00000371946 PEG3Q9GZU2 1588 aa23.6■■□□□ 1.37
MKNK1-204ENST00000371946 FAM9AQ8IZU1 332 aaPredicted RBP23.53■■□□□ 1.36
MKNK1-204ENST00000371946 ATAD2BQ9ULI0 1458 aa23.46■■□□□ 1.35
MKNK1-204ENST00000371946 BAZ1BQ9UIG0 1483 aaKnown RBP23.37■■□□□ 1.33
MKNK1-204ENST00000371946 ABCC8Q09428 1581 aa23.37■■□□□ 1.33
MKNK1-204ENST00000371946 PCGF6Q9BYE7 350 aa23.36■■□□□ 1.33
MKNK1-204ENST00000371946 EHMT2Q96KQ7 1210 aa23.22■■□□□ 1.31
MKNK1-204ENST00000371946 TRIM26Q12899 539 aaPredicted RBP23.16■■□□□ 1.3
MKNK1-204ENST00000371946 HRCP23327 699 aa23.15■■□□□ 1.3
MKNK1-204ENST00000371946 WRNQ14191 1432 aaPredicted RBP eCLIP23.15■■□□□ 1.3
MKNK1-204ENST00000371946 NCAPD3P42695 1498 aa23.14■■□□□ 1.29
MKNK1-204ENST00000371946 HMGXB3Q12766 1538 aa23.12■■□□□ 1.29
MKNK1-204ENST00000371946 EEA1Q15075 1411 aa23.1■■□□□ 1.29
MKNK1-204ENST00000371946 SOGA1O94964 1423 aa23.09■■□□□ 1.29
MKNK1-204ENST00000371946 CSRNP3Q8WYN3 585 aa23■■□□□ 1.27
MKNK1-204ENST00000371946 SYNJ1O43426 1573 aa23■■□□□ 1.27
MKNK1-204ENST00000371946 RUSC2Q8N2Y8 1516 aa22.96■■□□□ 1.27
MKNK1-204ENST00000371946 TNIKQ9UKE5 1360 aa22.9■■□□□ 1.26
MKNK1-204ENST00000371946 GOLGA3Q08378 1498 aa22.84■■□□□ 1.25
MKNK1-204ENST00000371946 CEP162Q5TB80 1403 aa22.83■■□□□ 1.24
MKNK1-204ENST00000371946 TOP2BQ02880 1626 aa22.83■■□□□ 1.24
MKNK1-204ENST00000371946 CFTRP13569 1480 aa22.8■■□□□ 1.24
MKNK1-204ENST00000371946 UBTFP17480 764 aaKnown RBP22.8■■□□□ 1.24
MKNK1-204ENST00000371946 CEP164Q9UPV0 1460 aa22.77■■□□□ 1.24
MKNK1-204ENST00000371946 BIVM-ERCC5R4GMW8 1640 aa22.76■■□□□ 1.23
MKNK1-204ENST00000371946 KIF21BO75037 1637 aa22.74■■□□□ 1.23
MKNK1-204ENST00000371946 CC2D2AQ9P2K1 1620 aa22.69■■□□□ 1.22
MKNK1-204ENST00000371946 PPARGC1BQ86YN6 1023 aaKnown RBP22.67■■□□□ 1.22
MKNK1-204ENST00000371946 CUX1P39880 1505 aa22.66■■□□□ 1.22
MKNK1-204ENST00000371946 CADPSQ9ULU8 1353 aa22.63■■□□□ 1.21
MKNK1-204ENST00000371946 PRDM2Q13029 1718 aa22.58■■□□□ 1.2
MKNK1-204ENST00000371946 RAPGEF2Q9Y4G8 1499 aa22.57■■□□□ 1.2
MKNK1-204ENST00000371946 ZEB1P37275 1124 aaPredicted RBP22.54■■□□□ 1.2
MKNK1-204ENST00000371946 CLIP1P30622 1438 aa22.52■■□□□ 1.2
MKNK1-204ENST00000371946 KIF27Q86VH2 1401 aa22.51■■□□□ 1.19
MKNK1-204ENST00000371946 PRXQ9BXM0 1461 aa22.49■■□□□ 1.19
MKNK1-204ENST00000371946 ERICH3Q5RHP9 1530 aa22.48■■□□□ 1.19
MKNK1-204ENST00000371946 VPS8Q8N3P4 1428 aa22.39■■□□□ 1.17
MKNK1-204ENST00000371946 TTBK1Q5TCY1 1321 aaPredicted RBP22.38■■□□□ 1.17
MKNK1-204ENST00000371946 FANCD2Q9BXW9 1451 aa22.37■■□□□ 1.17
MKNK1-204ENST00000371946 FGD5Q6ZNL6 1462 aa22.33■■□□□ 1.17
MKNK1-204ENST00000371946 CUX2O14529 1486 aa22.33■■□□□ 1.16
MKNK1-204ENST00000371946 RANGAP1P46060 587 aaPredicted RBP22.3■■□□□ 1.16
MKNK1-204ENST00000371946 IGF1RP08069 1367 aa22.27■■□□□ 1.15
MKNK1-204ENST00000371946 APLP2Q06481 763 aa22.25■■□□□ 1.15
MKNK1-204ENST00000371946 NESP48681 1621 aa22.25■■□□□ 1.15
MKNK1-204ENST00000371946 DNMBPQ6XZF7 1577 aa22.23■■□□□ 1.15
MKNK1-204ENST00000371946 LAMC3Q9Y6N6 1575 aa22.21■■□□□ 1.15
MKNK1-204ENST00000371946 ARAP1Q96P48 1450 aa22.2■■□□□ 1.14
MKNK1-204ENST00000371946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.19■■□□□ 1.14
MKNK1-204ENST00000371946 TOPBP1Q92547 1522 aa22.19■■□□□ 1.14
MKNK1-204ENST00000371946 CCER1Q8TC90 406 aaPredicted RBP22.18■■□□□ 1.14
MKNK1-204ENST00000371946 CARMIL1Q5VZK9 1371 aa22.17■■□□□ 1.14
MKNK1-204ENST00000371946 POLA1P09884 1462 aaPredicted RBP22.13■■□□□ 1.13
MKNK1-204ENST00000371946 ABCA10Q8WWZ4 1543 aa22.12■■□□□ 1.13
MKNK1-204ENST00000371946 RAD54L2Q9Y4B4 1467 aa22.11■■□□□ 1.13
MKNK1-204ENST00000371946 PDS5BQ9NTI5 1447 aa22.08■■□□□ 1.13
MKNK1-204ENST00000371946 ARHGAP35Q9NRY4 1499 aa22.08■■□□□ 1.13
MKNK1-204ENST00000371946 DNAJC5BQ9UF47 199 aa22.06■■□□□ 1.12
MKNK1-204ENST00000371946 URB2Q14146 1524 aaKnown RBP22.06■■□□□ 1.12
MKNK1-204ENST00000371946 HNRNPUL2Q1KMD3 747 aaKnown RBP21.96■■□□□ 1.11
MKNK1-204ENST00000371946 KANK4Q5T7N3 995 aaPredicted RBP21.94■■□□□ 1.1
MKNK1-204ENST00000371946 CUL7Q14999 1698 aa21.93■■□□□ 1.1
MKNK1-204ENST00000371946 WDR97A6NE52 1622 aa21.92■■□□□ 1.1
MKNK1-204ENST00000371946 KIF21AQ7Z4S6 1674 aa21.89■■□□□ 1.09
MKNK1-204ENST00000371946 TDRD9Q8NDG6 1382 aaKnown RBP21.86■■□□□ 1.09
MKNK1-204ENST00000371946 ABCA5Q8WWZ7 1642 aa21.85■■□□□ 1.09
MKNK1-204ENST00000371946 GAPVD1Q14C86 1478 aa21.84■■□□□ 1.09
MKNK1-204ENST00000371946 MAP3K1Q13233 1512 aa21.84■■□□□ 1.09
MKNK1-204ENST00000371946 FHAD1B1AJZ9 1412 aa21.83■■□□□ 1.09
MKNK1-204ENST00000371946 RRBP1Q9P2E9 1410 aaKnown RBP21.81■■□□□ 1.08
MKNK1-204ENST00000371946 EFCAB5A4FU69 1503 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms