RNA–Protein interactions for RNA: ENST00000371942.7

REXO4-202, Transcript of REX4 homolog, 3'-5' exonuclease, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene REXO4, Length 2,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REXO4-202ENST00000371942 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.88■■□□□ 1.737e-8■■■■■ 186.3
REXO4-202ENST00000371942 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.88■□□□□ 0.452e-8■■■■■ 31.6
REXO4-202ENST00000371942 UPF1Q92900 1129 aaKnown RBP eCLIP24.2■■□□□ 1.467e-8■■■■■ 27.6
REXO4-202ENST00000371942 SF3B4Q15427 424 aaKnown RBP eCLIP23.64■■□□□ 1.372e-6■■■■□ 26.7
REXO4-202ENST00000371942 AQRO60306 1485 aaKnown RBP eCLIP34.81■■■■□ 3.163e-6■■■■□ 22.7
REXO4-202ENST00000371942 DDX3XO00571 662 aaKnown RBP eCLIP26.37■■□□□ 1.813e-17■■■■□ 22.6
REXO4-202ENST00000371942 HNRNPMP52272 730 aaKnown RBP eCLIP32.81■■■□□ 2.845e-6■■■■□ 20.3
REXO4-202ENST00000371942 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.52■■□□□ 1.842e-7■■■■□ 20.1
REXO4-202ENST00000371942 RBM22Q9NW64 420 aaKnown RBP eCLIP24.24■■□□□ 1.475e-8■■■□□ 16.9
REXO4-202ENST00000371942 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.33■■■□□ 2.772e-6■■■□□ 15.2
REXO4-202ENST00000371942 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.07■■□□□ 1.282e-6■■□□□ 13.3
REXO4-202ENST00000371942 NOLC1Q14978 699 aaKnown RBP eCLIP29.18■■■□□ 2.262e-6■■□□□ 13.3
REXO4-202ENST00000371942 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.13■■■□□ 2.092e-6■■□□□ 13.1
REXO4-202ENST00000371942 PPIGQ13427 754 aaKnown RBP eCLIP23.42■■□□□ 1.341e-6■■□□□ 12.2
REXO4-202ENST00000371942 PABPC4Q13310 644 aaKnown RBP eCLIP26.3■■□□□ 1.87e-7■■□□□ 11.4
Retrieved 15 of 15 RNA–protein pairs in 5 ms