RNA–Protein interactions for RNA: ENST00000371873.9

CMPK1-203, Transcript of cytidine/uridine monophosphate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMPK1, Length 2,930 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMPK1-203ENST00000371873 PCBP2Q15366 365 aaKnown RBP eCLIP14.97□□□□□ -0.011e-6■■■■■ 83.8
CMPK1-203ENST00000371873 SF3B1O75533 1304 aaKnown RBP eCLIP15.91■□□□□ 0.143e-16■■■■■ 82.2
CMPK1-203ENST00000371873 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.2■□□□□ 0.342e-11■■■■■ 64.1
CMPK1-203ENST00000371873 MATR3P43243 847 aaKnown RBP eCLIP16.94■□□□□ 0.36e-13■■■■■ 46.7
CMPK1-203ENST00000371873 PABPC4Q13310 644 aaKnown RBP eCLIP17.33■□□□□ 0.362e-9■■■■■ 36.7
CMPK1-203ENST00000371873 PTBP1P26599 531 aaKnown RBP eCLIP13.24□□□□□ -0.294e-16■■■■■ 31.4
CMPK1-203ENST00000371873 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.17■□□□□ 0.342e-35■■■■■ 27
CMPK1-203ENST00000371873 DDX3XO00571 662 aaKnown RBP eCLIP16.66■□□□□ 0.261e-15■■■■□ 26
CMPK1-203ENST00000371873 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.94■□□□□ 0.37e-6■■■■□ 24.5
CMPK1-203ENST00000371873 TIA1P31483 386 aaKnown RBP eCLIP14.74□□□□□ -0.056e-10■■■■□ 21
CMPK1-203ENST00000371873 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.34■□□□□ 0.211e-6■■■□□ 17.6
CMPK1-203ENST00000371873 ILF3Q12906 894 aaKnown RBP eCLIP14.76□□□□□ -0.051e-6■■■□□ 16.6
CMPK1-203ENST00000371873 SF3B4Q15427 424 aaKnown RBP eCLIP13.2□□□□□ -0.32e-8■■■□□ 15.1
CMPK1-203ENST00000371873 HNRNPKP61978 463 aaKnown RBP eCLIP14.52□□□□□ -0.091e-7■■■□□ 15
CMPK1-203ENST00000371873 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.54■□□□□ 0.082e-6■■□□□ 14.1
CMPK1-203ENST00000371873 DDX6P26196 483 aaKnown RBP eCLIP15.23■□□□□ 0.034e-45■■□□□ 13.1
CMPK1-203ENST00000371873 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.11■□□□□ 0.656e-7■■□□□ 12.6
CMPK1-203ENST00000371873 KHSRPQ92945 711 aaKnown RBP eCLIP16.22■□□□□ 0.193e-7■■□□□ 12.3
CMPK1-203ENST00000371873 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.11■□□□□ 0.174e-9■■□□□ 12
CMPK1-203ENST00000371873 NOLC1Q14978 699 aaKnown RBP eCLIP17.24■□□□□ 0.352e-6■■□□□ 11.8
CMPK1-203ENST00000371873 RBM22Q9NW64 420 aaKnown RBP eCLIP15.79■□□□□ 0.122e-13■□□□□ 11.1
CMPK1-203ENST00000371873 SUB1P53999 127 aaKnown RBP eCLIP12.21□□□□□ -0.453e-6■□□□□ 11.1
CMPK1-203ENST00000371873 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.46■□□□□ 0.392e-9■□□□□ 11.1
CMPK1-203ENST00000371873 U2AF2P26368 475 aaKnown RBP eCLIP17.68■□□□□ 0.421e-6■□□□□ 10.6
CMPK1-203ENST00000371873 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.35■■□□□ 1.178e-8■□□□□ 10.3
CMPK1-203ENST00000371873 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.08■□□□□ 0.168e-14■□□□□ 10.3
CMPK1-203ENST00000371873 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.51■□□□□ 0.074e-9■□□□□ 9.9
CMPK1-203ENST00000371873 ZC3H11AO75152 810 aaKnown RBP eCLIP16.35■□□□□ 0.211e-19■□□□□ 9.7
CMPK1-203ENST00000371873 PUM1Q14671 1186 aaKnown RBP eCLIP14.48□□□□□ -0.093e-7■□□□□ 9.7
CMPK1-203ENST00000371873 YBX3P16989 372 aaKnown RBP eCLIP17.46■□□□□ 0.391e-7■□□□□ 9.4
CMPK1-203ENST00000371873 GPKOWQ92917 476 aaPredicted RBP eCLIP17.92■□□□□ 0.463e-6■□□□□ 9.4
CMPK1-203ENST00000371873 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.93□□□□□ -0.341e-15■□□□□ 9.4
CMPK1-203ENST00000371873 TIAL1Q01085 375 aaKnown RBP eCLIP15.33■□□□□ 0.041e-5■□□□□ 8.6
CMPK1-203ENST00000371873 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.04■■□□□ 1.122e-6■□□□□ 8.3
Retrieved 34 of 34 RNA–protein pairs in 9.4 ms