RNA–Protein interactions for RNA: ENST00000371871.8

CMPK1-202, Transcript of cytidine/uridine monophosphate kinase 1, humanhuman

TSL 2

Gene CMPK1, Length 1,212 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMPK1-202ENST00000371871 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.01■■□□□ 1.756e-20■■□□□ 11.9
CMPK1-202ENST00000371871 SF3B1O75533 1304 aaKnown RBP eCLIP24.95■■□□□ 1.583e-16■■■■■ 82.2
CMPK1-202ENST00000371871 PTBP1P26599 531 aaKnown RBP eCLIP16.95■□□□□ 0.34e-16■■■■■ 31.4
CMPK1-202ENST00000371871 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.86■■□□□ 1.577e-16■□□□□ 10.1
CMPK1-202ENST00000371871 DDX3XO00571 662 aaKnown RBP eCLIP22.77■■□□□ 1.241e-15■■■■□ 26
CMPK1-202ENST00000371871 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.47■□□□□ 0.711e-15■□□□□ 9.4
CMPK1-202ENST00000371871 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.85■□□□□ 0.932e-15■□□□□ 10.6
CMPK1-202ENST00000371871 RBM22Q9NW64 420 aaKnown RBP eCLIP22.57■■□□□ 1.22e-13■□□□□ 11.1
CMPK1-202ENST00000371871 MATR3P43243 847 aaKnown RBP eCLIP24.77■■□□□ 1.566e-13■■■■■ 46.7
CMPK1-202ENST00000371871 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.01■■□□□ 1.432e-11■■■■■ 64.1
CMPK1-202ENST00000371871 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.23■■□□□ 1.152e-10■■■□□ 15.7
CMPK1-202ENST00000371871 TIA1P31483 386 aaKnown RBP eCLIP20.58■□□□□ 0.891e-9■■■□□ 18.3
CMPK1-202ENST00000371871 PABPC4Q13310 644 aaKnown RBP eCLIP27.62■■■□□ 2.011e-8■■□□□ 12.5
CMPK1-202ENST00000371871 SF3B4Q15427 424 aaKnown RBP eCLIP20.69■□□□□ 0.92e-8■■■□□ 15.1
CMPK1-202ENST00000371871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.24■■■■□ 3.238e-8■□□□□ 10.3
CMPK1-202ENST00000371871 HNRNPKP61978 463 aaKnown RBP eCLIP22.99■■□□□ 1.271e-7■■■□□ 15
CMPK1-202ENST00000371871 YBX3P16989 372 aaKnown RBP eCLIP30.8■■■□□ 2.522e-7■□□□□ 9.7
CMPK1-202ENST00000371871 KHSRPQ92945 711 aaKnown RBP eCLIP25.63■■□□□ 1.693e-7■■□□□ 12.3
CMPK1-202ENST00000371871 PUM1Q14671 1186 aaKnown RBP eCLIP24.27■■□□□ 1.483e-7■□□□□ 9.7
CMPK1-202ENST00000371871 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.08■■■□□ 2.576e-7■■□□□ 12.6
CMPK1-202ENST00000371871 ILF3Q12906 894 aaKnown RBP eCLIP22.61■■□□□ 1.211e-6■■■□□ 16.6
CMPK1-202ENST00000371871 U2AF2P26368 475 aaKnown RBP eCLIP24.95■■□□□ 1.581e-6■□□□□ 10.6
CMPK1-202ENST00000371871 PCBP2Q15366 365 aaKnown RBP eCLIP20.88■□□□□ 0.931e-6■■■■■ 83.8
CMPK1-202ENST00000371871 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.55■■□□□ 1.841e-6■■■□□ 17.6
CMPK1-202ENST00000371871 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.27■■■■□ 3.562e-6■□□□□ 8.3
CMPK1-202ENST00000371871 GPKOWQ92917 476 aaPredicted RBP eCLIP26.18■■□□□ 1.783e-6■□□□□ 9.4
CMPK1-202ENST00000371871 SUB1P53999 127 aaKnown RBP eCLIP16.65■□□□□ 0.265e-6■□□□□ 9.5
CMPK1-202ENST00000371871 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.72■■□□□ 1.237e-6■■■■□ 24.5
Retrieved 28 of 28 RNA–protein pairs in 7.5 ms