RNA–Protein interactions for RNA: ENST00000371468.1

NSMF-202, Transcript of NMDA receptor synaptonuclear signaling and neuronal migration factor, humanhuman

TSL 2

Gene NSMF, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMF-202ENST00000371468 NISCHQ9Y2I1 1504 aa38.63■■■■□ 3.77
NSMF-202ENST00000371468 CCDC180Q9P1Z9 1646 aa33.97■■■■□ 3.03
NSMF-202ENST00000371468 ABCC9O60706 1549 aa32.68■■■□□ 2.82
NSMF-202ENST00000371468 ZCCHC6Q5VYS8 1495 aaKnown RBP32.28■■■□□ 2.76
NSMF-202ENST00000371468 DCAF8L2P0C7V8 631 aa32.13■■■□□ 2.73
NSMF-202ENST00000371468 DCAF1Q9Y4B6 1507 aa32.05■■■□□ 2.72
NSMF-202ENST00000371468 MYO15BQ96JP2 1530 aa31.98■■■□□ 2.71
NSMF-202ENST00000371468 NACADO15069 1562 aa31.91■■■□□ 2.7
NSMF-202ENST00000371468 RB1CC1Q8TDY2 1594 aa31.76■■■□□ 2.67
NSMF-202ENST00000371468 SCRIBQ14160 1630 aa31.01■■■□□ 2.55
NSMF-202ENST00000371468 SHROOM4Q9ULL8 1493 aa30.85■■■□□ 2.53
NSMF-202ENST00000371468 UNC13AQ9UPW8 1703 aa30.74■■■□□ 2.51
NSMF-202ENST00000371468 PABPN1Q86U42 306 aaKnown RBP eCLIP30.72■■■□□ 2.514e-9■■■□□ 15.8
NSMF-202ENST00000371468 BICRAQ9NZM4 1560 aa30.66■■■□□ 2.5
NSMF-202ENST00000371468 CECR2Q9BXF3 1484 aa29.97■■■□□ 2.39
NSMF-202ENST00000371468 BAZ1AQ9NRL2 1556 aaPredicted RBP29.91■■■□□ 2.38
NSMF-202ENST00000371468 EIF4G1Q04637 1599 aaKnown RBP29.86■■■□□ 2.37
NSMF-202ENST00000371468 SMARCA4P51532 1647 aa29.75■■■□□ 2.35
NSMF-202ENST00000371468 MROH2BQ7Z745 1585 aa29.72■■■□□ 2.35
NSMF-202ENST00000371468 RSF1Q96T23 1441 aaPredicted RBP29.7■■■□□ 2.34
NSMF-202ENST00000371468 CC2D2AQ9P2K1 1620 aa29.55■■■□□ 2.32
NSMF-202ENST00000371468 SMARCA2P51531 1590 aa29.54■■■□□ 2.32
NSMF-202ENST00000371468 ATAD2BQ9ULI0 1458 aa29.54■■■□□ 2.32
NSMF-202ENST00000371468 PEG3Q9GZU2 1588 aa29.52■■■□□ 2.32
NSMF-202ENST00000371468 NCAPD3P42695 1498 aa29.48■■■□□ 2.31
NSMF-202ENST00000371468 SUPT5HO00267 1087 aaKnown RBP29.46■■■□□ 2.31
NSMF-202ENST00000371468 DNAJC5BQ9UF47 199 aa29.45■■■□□ 2.31
NSMF-202ENST00000371468 WIZO95785 1651 aa29.35■■■□□ 2.29
NSMF-202ENST00000371468 BAZ1BQ9UIG0 1483 aaKnown RBP29.33■■■□□ 2.29
NSMF-202ENST00000371468 HMGXB3Q12766 1538 aa29.3■■■□□ 2.28
NSMF-202ENST00000371468 TOP2AP11388 1531 aaKnown RBP29.19■■■□□ 2.26
NSMF-202ENST00000371468 CCDC88BA6NC98 1476 aa28.87■■■□□ 2.21
NSMF-202ENST00000371468 CADPSQ9ULU8 1353 aa28.67■■■□□ 2.18
NSMF-202ENST00000371468 CFTRP13569 1480 aa28.59■■■□□ 2.17
NSMF-202ENST00000371468 LAMC3Q9Y6N6 1575 aa28.52■■■□□ 2.16
NSMF-202ENST00000371468 PDS5BQ9NTI5 1447 aa28.43■■■□□ 2.14
NSMF-202ENST00000371468 NESP48681 1621 aa28.42■■■□□ 2.14
NSMF-202ENST00000371468 FANCD2Q9BXW9 1451 aa28.27■■■□□ 2.12
NSMF-202ENST00000371468 ERCC6Q03468 1493 aa28.19■■■□□ 2.1
NSMF-202ENST00000371468 CEP164Q9UPV0 1460 aa28.17■■■□□ 2.1
NSMF-202ENST00000371468 PRDM2Q13029 1718 aa28.15■■■□□ 2.1
NSMF-202ENST00000371468 ABCC8Q09428 1581 aa28.03■■■□□ 2.08
NSMF-202ENST00000371468 MRC2Q9UBG0 1479 aa28.01■■■□□ 2.07
NSMF-202ENST00000371468 WRNQ14191 1432 aaPredicted RBP eCLIP28.01■■■□□ 2.07
NSMF-202ENST00000371468 KIF21AQ7Z4S6 1674 aa27.98■■■□□ 2.07
NSMF-202ENST00000371468 URB2Q14146 1524 aaKnown RBP27.88■■■□□ 2.05
NSMF-202ENST00000371468 CHIC1Q5VXU3 224 aa27.88■■■□□ 2.05
NSMF-202ENST00000371468 TRIM41Q8WV44 630 aa27.88■■■□□ 2.05
NSMF-202ENST00000371468 DNMBPQ6XZF7 1577 aa27.86■■■□□ 2.05
NSMF-202ENST00000371468 TOPBP1Q92547 1522 aa27.86■■■□□ 2.05
NSMF-202ENST00000371468 WDR62O43379 1518 aa27.84■■■□□ 2.05
NSMF-202ENST00000371468 CUX1P39880 1505 aa27.83■■■□□ 2.05
NSMF-202ENST00000371468 THOC2Q8NI27 1593 aaKnown RBP27.81■■■□□ 2.04
NSMF-202ENST00000371468 TOP2BQ02880 1626 aa27.78■■■□□ 2.04
NSMF-202ENST00000371468 SYNJ1O43426 1573 aa27.74■■■□□ 2.03
NSMF-202ENST00000371468 BIVM-ERCC5R4GMW8 1640 aa27.72■■■□□ 2.03
NSMF-202ENST00000371468 FGD5Q6ZNL6 1462 aa27.69■■■□□ 2.02
NSMF-202ENST00000371468 CUX2O14529 1486 aa27.68■■■□□ 2.02
NSMF-202ENST00000371468 POLA1P09884 1462 aaPredicted RBP27.66■■■□□ 2.02
NSMF-202ENST00000371468 SOGA1O94964 1423 aa27.66■■■□□ 2.02
NSMF-202ENST00000371468 IFT140Q96RY7 1462 aa27.61■■■□□ 2.01
NSMF-202ENST00000371468 RAD54L2Q9Y4B4 1467 aa27.52■■■□□ 2
NSMF-202ENST00000371468 ABCA10Q8WWZ4 1543 aa27.49■■□□□ 1.99
NSMF-202ENST00000371468 TARBP1Q13395 1621 aaKnown RBP27.43■■□□□ 1.98
NSMF-202ENST00000371468 KIF27Q86VH2 1401 aa27.42■■□□□ 1.98
NSMF-202ENST00000371468 TDRD9Q8NDG6 1382 aaKnown RBP27.38■■□□□ 1.97
NSMF-202ENST00000371468 WDR97A6NE52 1622 aa27.37■■□□□ 1.97
NSMF-202ENST00000371468 EEA1Q15075 1411 aa27.36■■□□□ 1.97
NSMF-202ENST00000371468 GAPVD1Q14C86 1478 aa27.31■■□□□ 1.96
NSMF-202ENST00000371468 ZNF608Q9ULD9 1512 aaPredicted RBP27.31■■□□□ 1.96
NSMF-202ENST00000371468 AQRO60306 1485 aaKnown RBP eCLIP27.29■■□□□ 1.961e-10■■■■■ 39.6
NSMF-202ENST00000371468 CSRNP3Q8WYN3 585 aa27.24■■□□□ 1.95
NSMF-202ENST00000371468 GRIN2BQ13224 1484 aa27.24■■□□□ 1.95
NSMF-202ENST00000371468 IGF1RP08069 1367 aa27.22■■□□□ 1.95
NSMF-202ENST00000371468 ABCA5Q8WWZ7 1642 aa27.21■■□□□ 1.95
NSMF-202ENST00000371468 RUSC2Q8N2Y8 1516 aa27.2■■□□□ 1.94
NSMF-202ENST00000371468 FAM9AQ8IZU1 332 aaPredicted RBP27.18■■□□□ 1.94
NSMF-202ENST00000371468 EIF4G3O43432 1585 aaKnown RBP27.18■■□□□ 1.94
NSMF-202ENST00000371468 ERICH3Q5RHP9 1530 aa27.17■■□□□ 1.94
NSMF-202ENST00000371468 CARMIL1Q5VZK9 1371 aa27.09■■□□□ 1.93
NSMF-202ENST00000371468 MAGI1Q96QZ7 1491 aaPredicted RBP27.08■■□□□ 1.93
NSMF-202ENST00000371468 FHAD1B1AJZ9 1412 aa27.06■■□□□ 1.92
NSMF-202ENST00000371468 SNAPC4Q5SXM2 1469 aa27.04■■□□□ 1.92
NSMF-202ENST00000371468 CHMP7Q8WUX9 453 aaPredicted RBP27.01■■□□□ 1.91
NSMF-202ENST00000371468 PRXQ9BXM0 1461 aa27■■□□□ 1.91
NSMF-202ENST00000371468 PBRM1Q86U86 1689 aa26.99■■□□□ 1.91
NSMF-202ENST00000371468 CUL7Q14999 1698 aa26.98■■□□□ 1.91
NSMF-202ENST00000371468 SYNJ2O15056 1496 aa26.97■■□□□ 1.91
NSMF-202ENST00000371468 RAPGEF2Q9Y4G8 1499 aa26.95■■□□□ 1.91
NSMF-202ENST00000371468 FBLN2P98095 1184 aa26.93■■□□□ 1.9
NSMF-202ENST00000371468 ADAMTS12P58397 1594 aa26.91■■□□□ 1.9
NSMF-202ENST00000371468 KIF21BO75037 1637 aa26.85■■□□□ 1.89
NSMF-202ENST00000371468 GRIN2AQ12879 1464 aa26.84■■□□□ 1.89
NSMF-202ENST00000371468 GOLGA3Q08378 1498 aa26.83■■□□□ 1.89
NSMF-202ENST00000371468 UBTFP17480 764 aaKnown RBP26.79■■□□□ 1.88
NSMF-202ENST00000371468 OSCARQ8IYS5 282 aa26.77■■□□□ 1.88
NSMF-202ENST00000371468 NUP160Q12769 1436 aa26.72■■□□□ 1.87
NSMF-202ENST00000371468 LOC105371045A0A1W2PR82 267 aa26.7■■□□□ 1.86
NSMF-202ENST00000371468 EHMT2Q96KQ7 1210 aa26.7■■□□□ 1.86
NSMF-202ENST00000371468 TNIKQ9UKE5 1360 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms