RNA–Protein interactions for RNA: ENST00000371421.8

ARRDC1-201, Transcript of arrestin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARRDC1, Length 1,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC1-201ENST00000371421 PUM2Q8TB72 1066 aaKnown RBP eCLIP27.05■■□□□ 1.921e-11■■■■■ 40.7
ARRDC1-201ENST00000371421 AQRO60306 1485 aaKnown RBP eCLIP47.85■■■■■ 5.252e-10■■■■■ 40
ARRDC1-201ENST00000371421 HNRNPKP61978 463 aaKnown RBP eCLIP28.18■■■□□ 2.13e-9■■■■■ 30.1
ARRDC1-201ENST00000371421 DDX3XO00571 662 aaKnown RBP eCLIP30.28■■■□□ 2.442e-8■■■■■ 37.8
ARRDC1-201ENST00000371421 SF3B1O75533 1304 aaKnown RBP eCLIP30.74■■■□□ 2.515e-8■■■■■ 37.4
ARRDC1-201ENST00000371421 PABPC4Q13310 644 aaKnown RBP eCLIP33.34■■■□□ 2.936e-8■■■■■ 34.2
ARRDC1-201ENST00000371421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP42.61■■■■■ 4.419e-8■■■■□ 24.5
ARRDC1-201ENST00000371421 NCBP2P52298 156 aaKnown RBP eCLIP26.83■■□□□ 1.891e-7■■■■□ 26
ARRDC1-201ENST00000371421 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP23.55■■□□□ 1.362e-7■■□□□ 11.4
ARRDC1-201ENST00000371421 BUD13Q9BRD0 619 aaKnown RBP eCLIP31.18■■■□□ 2.582e-7■■□□□ 12.1
ARRDC1-201ENST00000371421 DDX55Q8NHQ9 600 aaKnown RBP eCLIP33.82■■■■□ 33e-7■■■■■ 32.1
ARRDC1-201ENST00000371421 EFTUD2Q15029 972 aaKnown RBP eCLIP28.33■■■□□ 2.133e-7■■■■□ 23.4
ARRDC1-201ENST00000371421 NONOQ15233 471 aaKnown RBP eCLIP32.74■■■□□ 2.833e-7■■■■□ 23.9
ARRDC1-201ENST00000371421 EWSR1Q01844 656 aaKnown RBP eCLIP22.18■■□□□ 1.143e-7■■■■□ 20
ARRDC1-201ENST00000371421 PPIGQ13427 754 aaKnown RBP eCLIP31.32■■■□□ 2.64e-7■■■□□ 17.4
ARRDC1-201ENST00000371421 TIA1P31483 386 aaKnown RBP eCLIP27.14■■□□□ 1.944e-7■■□□□ 13
ARRDC1-201ENST00000371421 RBM15Q96T37 977 aaKnown RBP eCLIP29■■■□□ 2.234e-7■■■□□ 16.7
ARRDC1-201ENST00000371421 XPO5Q9HAV4 1204 aaKnown RBP eCLIP33.99■■■■□ 3.035e-7■■■■□ 23.7
ARRDC1-201ENST00000371421 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP26.29■■□□□ 1.88e-7■■■□□ 17.8
ARRDC1-201ENST00000371421 NKRFO15226 690 aaKnown RBP eCLIP32.36■■■□□ 2.771e-6■□□□□ 10.7
ARRDC1-201ENST00000371421 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP29.9■■■□□ 2.381e-6■■□□□ 11.8
ARRDC1-201ENST00000371421 SF3A3Q12874 501 aaKnown RBP eCLIP27.14■■□□□ 1.942e-6■■■■■ 28.4
ARRDC1-201ENST00000371421 PABPN1Q86U42 306 aaKnown RBP eCLIP53.87■■■■■ 6.212e-6■□□□□ 9.6
ARRDC1-201ENST00000371421 SLTMQ9NWH9 1034 aaKnown RBP eCLIP29.81■■■□□ 2.363e-6■■■■□ 19.9
ARRDC1-201ENST00000371421 UTP3Q9NQZ2 479 aaKnown RBP eCLIP30.8■■■□□ 2.524e-6■■■■■ 72.1
ARRDC1-201ENST00000371421 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP44.37■■■■■ 4.696e-6■■■■□ 24.8
ARRDC1-201ENST00000371421 FKBP4Q02790 459 aaKnown RBP eCLIP35.19■■■■□ 3.226e-6■■■□□ 14.6
ARRDC1-201ENST00000371421 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP43.71■■■■■ 4.596e-6■■■□□ 15.6
ARRDC1-201ENST00000371421 XRN2Q9H0D6 950 aaKnown RBP eCLIP32.24■■■□□ 2.751e-5■■■□□ 18
Retrieved 29 of 29 RNA–protein pairs in 7.6 ms