RNA–Protein interactions for RNA: ENST00000371124.4

ACTRT1-201, Transcript of actin related protein T1, humanhuman

APPRIS P1 BASIC

Gene ACTRT1, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTRT1-201ENST00000371124 NISCHQ9Y2I1 1504 aa25.34■■□□□ 1.65
ACTRT1-201ENST00000371124 CCDC180Q9P1Z9 1646 aa22.3■■□□□ 1.16
ACTRT1-201ENST00000371124 ABCC9O60706 1549 aa21.27■■□□□ 1
ACTRT1-201ENST00000371124 ZCCHC6Q5VYS8 1495 aaKnown RBP21.25■□□□□ 0.99
ACTRT1-201ENST00000371124 DCAF1Q9Y4B6 1507 aa20.98■□□□□ 0.95
ACTRT1-201ENST00000371124 DCAF8L2P0C7V8 631 aa20.88■□□□□ 0.93
ACTRT1-201ENST00000371124 MYO15BQ96JP2 1530 aa20.86■□□□□ 0.93
ACTRT1-201ENST00000371124 NACADO15069 1562 aa20.8■□□□□ 0.92
ACTRT1-201ENST00000371124 RB1CC1Q8TDY2 1594 aa20.7■□□□□ 0.9
ACTRT1-201ENST00000371124 SCRIBQ14160 1630 aa20.41■□□□□ 0.86
ACTRT1-201ENST00000371124 SHROOM4Q9ULL8 1493 aa20.38■□□□□ 0.85
ACTRT1-201ENST00000371124 UNC13AQ9UPW8 1703 aa20.28■□□□□ 0.84
ACTRT1-201ENST00000371124 BICRAQ9NZM4 1560 aa20.08■□□□□ 0.8
ACTRT1-201ENST00000371124 PABPN1Q86U42 306 aaKnown RBP eCLIP19.94■□□□□ 0.78
ACTRT1-201ENST00000371124 CECR2Q9BXF3 1484 aa19.68■□□□□ 0.74
ACTRT1-201ENST00000371124 BAZ1AQ9NRL2 1556 aaPredicted RBP19.6■□□□□ 0.73
ACTRT1-201ENST00000371124 SMARCA4P51532 1647 aa19.57■□□□□ 0.72
ACTRT1-201ENST00000371124 MROH2BQ7Z745 1585 aa19.56■□□□□ 0.72
ACTRT1-201ENST00000371124 RSF1Q96T23 1441 aaPredicted RBP19.51■□□□□ 0.71
ACTRT1-201ENST00000371124 EIF4G1Q04637 1599 aaKnown RBP19.5■□□□□ 0.71
ACTRT1-201ENST00000371124 SUPT5HO00267 1087 aaKnown RBP19.42■□□□□ 0.7
ACTRT1-201ENST00000371124 WIZO95785 1651 aa19.38■□□□□ 0.69
ACTRT1-201ENST00000371124 PEG3Q9GZU2 1588 aa19.35■□□□□ 0.69
ACTRT1-201ENST00000371124 SMARCA2P51531 1590 aa19.3■□□□□ 0.68
ACTRT1-201ENST00000371124 ATAD2BQ9ULI0 1458 aa19.29■□□□□ 0.68
ACTRT1-201ENST00000371124 CC2D2AQ9P2K1 1620 aa19.28■□□□□ 0.68
ACTRT1-201ENST00000371124 TOP2AP11388 1531 aaKnown RBP19.2■□□□□ 0.66
ACTRT1-201ENST00000371124 NCAPD3P42695 1498 aa19.17■□□□□ 0.66
ACTRT1-201ENST00000371124 BAZ1BQ9UIG0 1483 aaKnown RBP19.17■□□□□ 0.66
ACTRT1-201ENST00000371124 HMGXB3Q12766 1538 aa19.17■□□□□ 0.66
ACTRT1-201ENST00000371124 DNAJC5BQ9UF47 199 aa18.99■□□□□ 0.63
ACTRT1-201ENST00000371124 CCDC88BA6NC98 1476 aa18.96■□□□□ 0.63
ACTRT1-201ENST00000371124 CFTRP13569 1480 aa18.67■□□□□ 0.58
ACTRT1-201ENST00000371124 CADPSQ9ULU8 1353 aa18.64■□□□□ 0.57
ACTRT1-201ENST00000371124 PRDM2Q13029 1718 aa18.62■□□□□ 0.57
ACTRT1-201ENST00000371124 LAMC3Q9Y6N6 1575 aa18.61■□□□□ 0.57
ACTRT1-201ENST00000371124 NESP48681 1621 aa18.59■□□□□ 0.57
ACTRT1-201ENST00000371124 ABCC8Q09428 1581 aa18.47■□□□□ 0.55
ACTRT1-201ENST00000371124 FANCD2Q9BXW9 1451 aa18.46■□□□□ 0.55
ACTRT1-201ENST00000371124 CHIC1Q5VXU3 224 aa18.44■□□□□ 0.54
ACTRT1-201ENST00000371124 PDS5BQ9NTI5 1447 aa18.43■□□□□ 0.54
ACTRT1-201ENST00000371124 KIF21AQ7Z4S6 1674 aa18.41■□□□□ 0.54
ACTRT1-201ENST00000371124 CEP164Q9UPV0 1460 aa18.39■□□□□ 0.53
ACTRT1-201ENST00000371124 WRNQ14191 1432 aaPredicted RBP eCLIP18.38■□□□□ 0.53
ACTRT1-201ENST00000371124 SYNJ1O43426 1573 aa18.35■□□□□ 0.53
ACTRT1-201ENST00000371124 CUX1P39880 1505 aa18.31■□□□□ 0.52
ACTRT1-201ENST00000371124 BIVM-ERCC5R4GMW8 1640 aa18.31■□□□□ 0.52
ACTRT1-201ENST00000371124 TOP2BQ02880 1626 aa18.3■□□□□ 0.52
ACTRT1-201ENST00000371124 TRIM41Q8WV44 630 aa18.29■□□□□ 0.52
ACTRT1-201ENST00000371124 ERCC6Q03468 1493 aa18.28■□□□□ 0.52
ACTRT1-201ENST00000371124 DNMBPQ6XZF7 1577 aa18.27■□□□□ 0.51
ACTRT1-201ENST00000371124 URB2Q14146 1524 aaKnown RBP18.25■□□□□ 0.51
ACTRT1-201ENST00000371124 MRC2Q9UBG0 1479 aa18.24■□□□□ 0.51
ACTRT1-201ENST00000371124 TOPBP1Q92547 1522 aa18.23■□□□□ 0.51
ACTRT1-201ENST00000371124 THOC2Q8NI27 1593 aaKnown RBP18.21■□□□□ 0.51
ACTRT1-201ENST00000371124 WDR62O43379 1518 aa18.18■□□□□ 0.5
ACTRT1-201ENST00000371124 FGD5Q6ZNL6 1462 aa18.16■□□□□ 0.5
ACTRT1-201ENST00000371124 POLA1P09884 1462 aaPredicted RBP18.11■□□□□ 0.49
ACTRT1-201ENST00000371124 SOGA1O94964 1423 aa18.03■□□□□ 0.48
ACTRT1-201ENST00000371124 RAD54L2Q9Y4B4 1467 aa18.03■□□□□ 0.48
ACTRT1-201ENST00000371124 WDR97A6NE52 1622 aa18.02■□□□□ 0.48
ACTRT1-201ENST00000371124 CUX2O14529 1486 aa18.01■□□□□ 0.47
ACTRT1-201ENST00000371124 TARBP1Q13395 1621 aaKnown RBP18.01■□□□□ 0.47
ACTRT1-201ENST00000371124 ABCA10Q8WWZ4 1543 aa18■□□□□ 0.47
ACTRT1-201ENST00000371124 RUSC2Q8N2Y8 1516 aa17.98■□□□□ 0.47
ACTRT1-201ENST00000371124 EEA1Q15075 1411 aa17.96■□□□□ 0.47
ACTRT1-201ENST00000371124 IFT140Q96RY7 1462 aa17.96■□□□□ 0.47
ACTRT1-201ENST00000371124 KIF27Q86VH2 1401 aa17.93■□□□□ 0.46
ACTRT1-201ENST00000371124 FAM9AQ8IZU1 332 aaPredicted RBP17.92■□□□□ 0.46
ACTRT1-201ENST00000371124 ABCA5Q8WWZ7 1642 aa17.91■□□□□ 0.46
ACTRT1-201ENST00000371124 ZNF608Q9ULD9 1512 aaPredicted RBP17.86■□□□□ 0.45
ACTRT1-201ENST00000371124 TDRD9Q8NDG6 1382 aaKnown RBP17.85■□□□□ 0.45
ACTRT1-201ENST00000371124 EIF4G3O43432 1585 aaKnown RBP17.84■□□□□ 0.45
ACTRT1-201ENST00000371124 GAPVD1Q14C86 1478 aa17.84■□□□□ 0.45
ACTRT1-201ENST00000371124 CSRNP3Q8WYN3 585 aa17.82■□□□□ 0.44
ACTRT1-201ENST00000371124 PBRM1Q86U86 1689 aa17.82■□□□□ 0.44
ACTRT1-201ENST00000371124 AQRO60306 1485 aaKnown RBP eCLIP17.81■□□□□ 0.44
ACTRT1-201ENST00000371124 ERICH3Q5RHP9 1530 aa17.79■□□□□ 0.44
ACTRT1-201ENST00000371124 IGF1RP08069 1367 aa17.78■□□□□ 0.44
ACTRT1-201ENST00000371124 KIF21BO75037 1637 aa17.78■□□□□ 0.44
ACTRT1-201ENST00000371124 CUL7Q14999 1698 aa17.76■□□□□ 0.43
ACTRT1-201ENST00000371124 GRIN2BQ13224 1484 aa17.76■□□□□ 0.43
ACTRT1-201ENST00000371124 PRXQ9BXM0 1461 aa17.75■□□□□ 0.43
ACTRT1-201ENST00000371124 GOLGA3Q08378 1498 aa17.7■□□□□ 0.42
ACTRT1-201ENST00000371124 ADAMTS12P58397 1594 aa17.7■□□□□ 0.42
ACTRT1-201ENST00000371124 CARMIL1Q5VZK9 1371 aa17.69■□□□□ 0.42
ACTRT1-201ENST00000371124 RAPGEF2Q9Y4G8 1499 aa17.69■□□□□ 0.42
ACTRT1-201ENST00000371124 SNAPC4Q5SXM2 1469 aa17.68■□□□□ 0.42
ACTRT1-201ENST00000371124 LOC105371045A0A1W2PR82 267 aa17.68■□□□□ 0.42
ACTRT1-201ENST00000371124 EHMT2Q96KQ7 1210 aa17.66■□□□□ 0.42
ACTRT1-201ENST00000371124 MAGI1Q96QZ7 1491 aaPredicted RBP17.66■□□□□ 0.42
ACTRT1-201ENST00000371124 FHAD1B1AJZ9 1412 aa17.64■□□□□ 0.42
ACTRT1-201ENST00000371124 SYNJ2O15056 1496 aa17.58■□□□□ 0.4
ACTRT1-201ENST00000371124 TNIKQ9UKE5 1360 aa17.56■□□□□ 0.4
ACTRT1-201ENST00000371124 UBTFP17480 764 aaKnown RBP17.55■□□□□ 0.4
ACTRT1-201ENST00000371124 GRIN2AQ12879 1464 aa17.55■□□□□ 0.4
ACTRT1-201ENST00000371124 CTTNBP2Q8WZ74 1663 aa17.52■□□□□ 0.4
ACTRT1-201ENST00000371124 CHD1O14646 1710 aa17.51■□□□□ 0.39
ACTRT1-201ENST00000371124 CHMP7Q8WUX9 453 aaPredicted RBP17.48■□□□□ 0.39
ACTRT1-201ENST00000371124 FBLN2P98095 1184 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms