RNA–Protein interactions for RNA: ENST00000370876.6

MLIP-202, Transcript of muscular LMNA interacting protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MLIP, Length 1,076 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLIP-202ENST00000370876 NISCHQ9Y2I1 1504 aa27.85■■■□□ 2.05
MLIP-202ENST00000370876 CCDC180Q9P1Z9 1646 aa25.04■■□□□ 1.6
MLIP-202ENST00000370876 ABCC9O60706 1549 aa24.88■■□□□ 1.57
MLIP-202ENST00000370876 RB1CC1Q8TDY2 1594 aa23.73■■□□□ 1.39
MLIP-202ENST00000370876 NACADO15069 1562 aa23.56■■□□□ 1.36
MLIP-202ENST00000370876 DCAF8L2P0C7V8 631 aa23.36■■□□□ 1.33
MLIP-202ENST00000370876 UNC13AQ9UPW8 1703 aa23.33■■□□□ 1.32
MLIP-202ENST00000370876 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
MLIP-202ENST00000370876 ZCCHC6Q5VYS8 1495 aaKnown RBP23.15■■□□□ 1.3
MLIP-202ENST00000370876 DNAJC5BQ9UF47 199 aa23.13■■□□□ 1.29
MLIP-202ENST00000370876 PABPN1Q86U42 306 aaKnown RBP eCLIP23.1■■□□□ 1.29
MLIP-202ENST00000370876 BICRAQ9NZM4 1560 aa23.06■■□□□ 1.28
MLIP-202ENST00000370876 DCAF1Q9Y4B6 1507 aa22.99■■□□□ 1.27
MLIP-202ENST00000370876 SCRIBQ14160 1630 aa22.85■■□□□ 1.25
MLIP-202ENST00000370876 SHROOM4Q9ULL8 1493 aa22.7■■□□□ 1.22
MLIP-202ENST00000370876 CC2D2AQ9P2K1 1620 aa22.5■■□□□ 1.19
MLIP-202ENST00000370876 EIF4G1Q04637 1599 aaKnown RBP22.47■■□□□ 1.19
MLIP-202ENST00000370876 CECR2Q9BXF3 1484 aa22.38■■□□□ 1.17
MLIP-202ENST00000370876 SMARCA4P51532 1647 aa21.77■■□□□ 1.08
MLIP-202ENST00000370876 NCAPD3P42695 1498 aa21.69■■□□□ 1.06
MLIP-202ENST00000370876 ATAD2BQ9ULI0 1458 aa21.68■■□□□ 1.06
MLIP-202ENST00000370876 SMARCA2P51531 1590 aa21.65■■□□□ 1.06
MLIP-202ENST00000370876 HMGXB3Q12766 1538 aa21.64■■□□□ 1.05
MLIP-202ENST00000370876 BAZ1AQ9NRL2 1556 aaPredicted RBP21.63■■□□□ 1.05
MLIP-202ENST00000370876 PEG3Q9GZU2 1588 aa21.52■■□□□ 1.04
MLIP-202ENST00000370876 BAZ1BQ9UIG0 1483 aaKnown RBP21.52■■□□□ 1.03
MLIP-202ENST00000370876 MROH2BQ7Z745 1585 aa21.49■■□□□ 1.03
MLIP-202ENST00000370876 ERCC6Q03468 1493 aa21.46■■□□□ 1.03
MLIP-202ENST00000370876 NESP48681 1621 aa21.42■■□□□ 1.02
MLIP-202ENST00000370876 CUX2O14529 1486 aa21.36■■□□□ 1.01
MLIP-202ENST00000370876 WIZO95785 1651 aa21.29■■□□□ 1
MLIP-202ENST00000370876 LAMC3Q9Y6N6 1575 aa21.26■□□□□ 0.99
MLIP-202ENST00000370876 THOC2Q8NI27 1593 aaKnown RBP21.24■□□□□ 0.99
MLIP-202ENST00000370876 KIF21AQ7Z4S6 1674 aa21.24■□□□□ 0.99
MLIP-202ENST00000370876 DNAJC5Q9H3Z4 198 aa21.12■□□□□ 0.97
MLIP-202ENST00000370876 PDS5BQ9NTI5 1447 aa21.05■□□□□ 0.96
MLIP-202ENST00000370876 RSF1Q96T23 1441 aaPredicted RBP21.03■□□□□ 0.96
MLIP-202ENST00000370876 CADPSQ9ULU8 1353 aa21.02■□□□□ 0.96
MLIP-202ENST00000370876 TOP2AP11388 1531 aaKnown RBP21■□□□□ 0.95
MLIP-202ENST00000370876 MRC2Q9UBG0 1479 aa20.95■□□□□ 0.94
MLIP-202ENST00000370876 WDR62O43379 1518 aa20.92■□□□□ 0.94
MLIP-202ENST00000370876 CEP164Q9UPV0 1460 aa20.89■□□□□ 0.94
MLIP-202ENST00000370876 FANCD2Q9BXW9 1451 aa20.86■□□□□ 0.93
MLIP-202ENST00000370876 CFTRP13569 1480 aa20.85■□□□□ 0.93
MLIP-202ENST00000370876 PRDM2Q13029 1718 aa20.84■□□□□ 0.93
MLIP-202ENST00000370876 URB2Q14146 1524 aaKnown RBP20.71■□□□□ 0.91
MLIP-202ENST00000370876 CCDC88BA6NC98 1476 aa20.69■□□□□ 0.9
MLIP-202ENST00000370876 TOPBP1Q92547 1522 aa20.49■□□□□ 0.87
MLIP-202ENST00000370876 DNMBPQ6XZF7 1577 aa20.46■□□□□ 0.87
MLIP-202ENST00000370876 IFT140Q96RY7 1462 aa20.43■□□□□ 0.86
MLIP-202ENST00000370876 ZNF608Q9ULD9 1512 aaPredicted RBP20.43■□□□□ 0.86
MLIP-202ENST00000370876 EIF4G3O43432 1585 aaKnown RBP20.41■□□□□ 0.86
MLIP-202ENST00000370876 ABCC8Q09428 1581 aa20.38■□□□□ 0.85
MLIP-202ENST00000370876 TARBP1Q13395 1621 aaKnown RBP20.35■□□□□ 0.85
MLIP-202ENST00000370876 TRIM41Q8WV44 630 aa20.32■□□□□ 0.84
MLIP-202ENST00000370876 POLA1P09884 1462 aaPredicted RBP20.29■□□□□ 0.84
MLIP-202ENST00000370876 OSCARQ8IYS5 282 aa20.28■□□□□ 0.84
MLIP-202ENST00000370876 CHD1O14646 1710 aa20.26■□□□□ 0.83
MLIP-202ENST00000370876 AQRO60306 1485 aaKnown RBP eCLIP20.22■□□□□ 0.83
MLIP-202ENST00000370876 RIMBP3CA6NJZ7 1639 aa20.21■□□□□ 0.83
MLIP-202ENST00000370876 RIMBP3BA6NNM3 1639 aa20.21■□□□□ 0.83
MLIP-202ENST00000370876 RIMBP3Q9UFD9 1639 aa20.21■□□□□ 0.83
MLIP-202ENST00000370876 RAD54L2Q9Y4B4 1467 aa20.2■□□□□ 0.82
MLIP-202ENST00000370876 CUX1P39880 1505 aa20.2■□□□□ 0.82
MLIP-202ENST00000370876 FGD5Q6ZNL6 1462 aa20.19■□□□□ 0.82
MLIP-202ENST00000370876 WDR97A6NE52 1622 aa20.14■□□□□ 0.81
MLIP-202ENST00000370876 SUPT5HO00267 1087 aaKnown RBP20.14■□□□□ 0.81
MLIP-202ENST00000370876 ARHGEF11O15085 1522 aa20.12■□□□□ 0.81
MLIP-202ENST00000370876 SOGA1O94964 1423 aa20.12■□□□□ 0.81
MLIP-202ENST00000370876 TDRD9Q8NDG6 1382 aaKnown RBP20.09■□□□□ 0.81
MLIP-202ENST00000370876 SNAPC4Q5SXM2 1469 aa20.07■□□□□ 0.8
MLIP-202ENST00000370876 PBRM1Q86U86 1689 aa20.06■□□□□ 0.8
MLIP-202ENST00000370876 FBLN2P98095 1184 aa20.02■□□□□ 0.8
MLIP-202ENST00000370876 MAGI1Q96QZ7 1491 aaPredicted RBP19.99■□□□□ 0.79
MLIP-202ENST00000370876 ABCA5Q8WWZ7 1642 aa19.98■□□□□ 0.79
MLIP-202ENST00000370876 GRIN2BQ13224 1484 aa19.98■□□□□ 0.79
MLIP-202ENST00000370876 CLASP1Q7Z460 1538 aa19.96■□□□□ 0.79
MLIP-202ENST00000370876 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
MLIP-202ENST00000370876 SYNJ1O43426 1573 aa19.94■□□□□ 0.78
MLIP-202ENST00000370876 ARAP1Q96P48 1450 aa19.93■□□□□ 0.78
MLIP-202ENST00000370876 ABCA10Q8WWZ4 1543 aa19.93■□□□□ 0.78
MLIP-202ENST00000370876 SYNJ2O15056 1496 aa19.92■□□□□ 0.78
MLIP-202ENST00000370876 GAPVD1Q14C86 1478 aa19.92■□□□□ 0.78
MLIP-202ENST00000370876 TOP2BQ02880 1626 aa19.91■□□□□ 0.78
MLIP-202ENST00000370876 CHMP7Q8WUX9 453 aaPredicted RBP19.85■□□□□ 0.77
MLIP-202ENST00000370876 WRNQ14191 1432 aaPredicted RBP eCLIP19.85■□□□□ 0.77
MLIP-202ENST00000370876 CYB5RLQ6IPT4 315 aa19.84■□□□□ 0.77
MLIP-202ENST00000370876 ADAMTS12P58397 1594 aa19.83■□□□□ 0.77
MLIP-202ENST00000370876 GRIN2AQ12879 1464 aa19.76■□□□□ 0.75
MLIP-202ENST00000370876 CEP170Q5SW79 1584 aa19.74■□□□□ 0.75
MLIP-202ENST00000370876 ERICH3Q5RHP9 1530 aa19.69■□□□□ 0.74
MLIP-202ENST00000370876 ERCC6L2Q5T890 1561 aa19.67■□□□□ 0.74
MLIP-202ENST00000370876 FHAD1B1AJZ9 1412 aa19.66■□□□□ 0.74
MLIP-202ENST00000370876 NUP160Q12769 1436 aa19.66■□□□□ 0.74
MLIP-202ENST00000370876 SHROOM2Q13796 1616 aa19.63■□□□□ 0.73
MLIP-202ENST00000370876 TRHP20396 242 aaPredicted RBP19.59■□□□□ 0.73
MLIP-202ENST00000370876 RUSC2Q8N2Y8 1516 aa19.56■□□□□ 0.72
MLIP-202ENST00000370876 CUL7Q14999 1698 aa19.49■□□□□ 0.71
MLIP-202ENST00000370876 PRG4Q92954 1404 aaPredicted RBP19.45■□□□□ 0.7
MLIP-202ENST00000370876 KIF27Q86VH2 1401 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms