RNA–Protein interactions for RNA: ENST00000370355.2

SCD-201, Transcript of stearoyl-CoA desaturase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCD, Length 5,362 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCD-201ENST00000370355 UPF1Q92900 1129 aaKnown RBP eCLIP8.93□□□□□ -0.985e-83■■■■■ 143.6
SCD-201ENST00000370355 AKAP1Q92667 903 aaKnown RBP eCLIP8.64□□□□□ -1.035e-47■■■■■ 44
SCD-201ENST00000370355 YBX3P16989 372 aaKnown RBP eCLIP9.08□□□□□ -0.967e-47■■■□□ 15.1
SCD-201ENST00000370355 DDX3XO00571 662 aaKnown RBP eCLIP9.26□□□□□ -0.932e-40■■■□□ 18.1
SCD-201ENST00000370355 G3BP1Q13283 466 aaKnown RBP eCLIP10.9□□□□□ -0.667e-36■□□□□ 8.5
SCD-201ENST00000370355 QKIQ96PU8 341 aaKnown RBP eCLIP9.01□□□□□ -0.971e-27■□□□□ 11
SCD-201ENST00000370355 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.88□□□□□ -0.831e-27■□□□□ 10.6
SCD-201ENST00000370355 SND1Q7KZF4 910 aaKnown RBP eCLIP9.92□□□□□ -0.825e-26■■■■■ 55.9
SCD-201ENST00000370355 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.35□□□□□ -0.912e-25■■■■□ 20.8
SCD-201ENST00000370355 FUBP3Q96I24 572 aaKnown RBP eCLIP8.84□□□□□ -0.994e-24■□□□□ 9.7
SCD-201ENST00000370355 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.57□□□□□ -1.042e-20■■□□□ 13.1
SCD-201ENST00000370355 PABPC4Q13310 644 aaKnown RBP eCLIP10.02□□□□□ -0.816e-20■■■□□ 19.2
SCD-201ENST00000370355 TARDBPQ13148 414 aaKnown RBP eCLIP8.73□□□□□ -1.013e-19■■■■□ 20.3
SCD-201ENST00000370355 DDX6P26196 483 aaKnown RBP eCLIP8.79□□□□□ -13e-19■■■■■ 27.5
SCD-201ENST00000370355 NOLC1Q14978 699 aaKnown RBP eCLIP10.36□□□□□ -0.758e-19■□□□□ 10.1
SCD-201ENST00000370355 RBM22Q9NW64 420 aaKnown RBP eCLIP9.15□□□□□ -0.959e-19■■□□□ 12
SCD-201ENST00000370355 PABPN1Q86U42 306 aaKnown RBP eCLIP12.83□□□□□ -0.367e-18■□□□□ 9
SCD-201ENST00000370355 TIA1P31483 386 aaKnown RBP eCLIP8.63□□□□□ -1.033e-17■■■■■ 31.2
SCD-201ENST00000370355 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.92□□□□□ -0.825e-16■□□□□ 10.3
SCD-201ENST00000370355 DKC1O60832 514 aaKnown RBP eCLIP10.07□□□□□ -0.86e-16■□□□□ 8.4
SCD-201ENST00000370355 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.64□□□□□ -0.871e-15■■■■□ 22.1
SCD-201ENST00000370355 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.31□□□□□ -0.768e-15■□□□□ 8.8
SCD-201ENST00000370355 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.08□□□□□ -0.82e-14■□□□□ 8.8
SCD-201ENST00000370355 RPS3P23396 243 aaKnown RBP eCLIP8.62□□□□□ -1.039e-14■■■■□ 20.3
SCD-201ENST00000370355 TIAL1Q01085 375 aaKnown RBP eCLIP8.18□□□□□ -1.12e-12■■□□□ 13.9
SCD-201ENST00000370355 XRCC6P12956 609 aaKnown RBP eCLIP10.55□□□□□ -0.723e-12■□□□□ 9.8
SCD-201ENST00000370355 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.37□□□□□ -0.911e-11■■□□□ 13
SCD-201ENST00000370355 PUM1Q14671 1186 aaKnown RBP eCLIP8.75□□□□□ -1.012e-11■□□□□ 10.7
SCD-201ENST00000370355 PCBP1Q15365 356 aaKnown RBP eCLIP9.13□□□□□ -0.953e-11■■■□□ 15.8
SCD-201ENST00000370355 HNRNPLP14866 589 aaKnown RBP eCLIP8.95□□□□□ -0.983e-11■■■□□ 14.8
SCD-201ENST00000370355 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.02□□□□□ -0.978e-11■■■□□ 15.4
SCD-201ENST00000370355 MATR3P43243 847 aaKnown RBP eCLIP10.57□□□□□ -0.724e-10■■□□□ 12.2
SCD-201ENST00000370355 RBM5P52756 815 aaKnown RBP eCLIP10.74□□□□□ -0.695e-10■■■■□ 19.6
SCD-201ENST00000370355 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.37□□□□□ -0.591e-9■□□□□ 9.6
SCD-201ENST00000370355 PTBP1P26599 531 aaKnown RBP eCLIP8.46□□□□□ -1.061e-9■■■■■ 34.2
SCD-201ENST00000370355 RBFOX2O43251 390 aaKnown RBP eCLIP7.63□□□□□ -1.191e-9■■□□□ 13
SCD-201ENST00000370355 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.5□□□□□ -1.052e-9■■□□□ 11.9
SCD-201ENST00000370355 TAF15Q92804 592 aaKnown RBP eCLIP7.74□□□□□ -1.172e-9■□□□□ 9.8
SCD-201ENST00000370355 FXR2P51116 673 aaKnown RBP eCLIP9.51□□□□□ -0.893e-9■□□□□ 10.8
SCD-201ENST00000370355 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.23□□□□□ -0.775e-9■□□□□ 10.1
SCD-201ENST00000370355 HNRNPUQ00839 825 aaKnown RBP eCLIP12.13□□□□□ -0.478e-9■□□□□ 10
SCD-201ENST00000370355 SUB1P53999 127 aaKnown RBP eCLIP8.24□□□□□ -1.099e-9■■■□□ 17.9
SCD-201ENST00000370355 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.29□□□□□ -0.761e-8■■■□□ 15.7
SCD-201ENST00000370355 PCBP2Q15366 365 aaKnown RBP eCLIP8.65□□□□□ -1.021e-8■■■□□ 17.3
SCD-201ENST00000370355 FTOQ9C0B1 505 aaKnown RBP eCLIP9.79□□□□□ -0.843e-8■■□□□ 11.5
SCD-201ENST00000370355 RBM15Q96T37 977 aaKnown RBP eCLIP9.45□□□□□ -0.93e-8■□□□□ 9.5
SCD-201ENST00000370355 SF3B4Q15427 424 aaKnown RBP eCLIP8.68□□□□□ -1.025e-8■□□□□ 11
SCD-201ENST00000370355 EFTUD2Q15029 972 aaKnown RBP eCLIP9.45□□□□□ -0.99e-8■■■■□ 25
SCD-201ENST00000370355 AQRO60306 1485 aaKnown RBP eCLIP11.23□□□□□ -0.619e-8■■■■□ 25.7
SCD-201ENST00000370355 PRPF4O43172 522 aaKnown RBP eCLIP9.47□□□□□ -0.891e-7■■□□□ 12.7
SCD-201ENST00000370355 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.47□□□□□ -1.212e-7■■■■□ 21.1
SCD-201ENST00000370355 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.07□□□□□ -0.482e-7■□□□□ 8.1
SCD-201ENST00000370355 IGF2BP3O00425 579 aaKnown RBP eCLIP9.39□□□□□ -0.913e-7■■□□□ 14.5
SCD-201ENST00000370355 ZC3H11AO75152 810 aaKnown RBP eCLIP9.41□□□□□ -0.93e-7■■■□□ 15.9
SCD-201ENST00000370355 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.02□□□□□ -0.974e-7■□□□□ 9.2
SCD-201ENST00000370355 ILF3Q12906 894 aaKnown RBP eCLIP8.99□□□□□ -0.977e-7■■■■□ 19.6
SCD-201ENST00000370355 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.24□□□□□ -0.937e-7■■■■□ 25.3
SCD-201ENST00000370355 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.81□□□□□ -19e-7■□□□□ 10.8
SCD-201ENST00000370355 METAP2P50579 478 aaKnown RBP eCLIP10.3□□□□□ -0.761e-6■■□□□ 12
SCD-201ENST00000370355 SF3A3Q12874 501 aaKnown RBP eCLIP9.63□□□□□ -0.871e-6■■■■□ 21.1
SCD-201ENST00000370355 FXR1P51114 621 aaKnown RBP eCLIP9.57□□□□□ -0.882e-6■■□□□ 13
SCD-201ENST00000370355 WRNQ14191 1432 aaPredicted RBP eCLIP12.18□□□□□ -0.462e-6■□□□□ 11.3
SCD-201ENST00000370355 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.88□□□□□ -0.674e-6■■■□□ 16.4
SCD-201ENST00000370355 AARSP49588 968 aaKnown RBP eCLIP9.52□□□□□ -0.897e-6■□□□□ 11.2
SCD-201ENST00000370355 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.04□□□□□ -0.968e-6■■□□□ 13.3
SCD-201ENST00000370355 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.17□□□□□ -0.949e-6■■□□□ 11.5
SCD-201ENST00000370355 TROVE2P10155 538 aaKnown RBP eCLIP9.84□□□□□ -0.839e-6■□□□□ 8.9
Retrieved 67 of 67 RNA–protein pairs in 14.6 ms