RNA–Protein interactions for RNA: ENST00000370007.5

NOLC1-201, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 1 (best)

Gene NOLC1, Length 3,727 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-201ENST00000370007 NISCHQ9Y2I1 1504 aa12.99□□□□□ -0.33
NOLC1-201ENST00000370007 PELP1Q8IZL8 1130 aaKnown RBP12.49□□□□□ -0.41
NOLC1-201ENST00000370007 MYT1Q01538 1121 aa12.16□□□□□ -0.46
NOLC1-201ENST00000370007 CCDC180Q9P1Z9 1646 aa12.01□□□□□ -0.49
NOLC1-201ENST00000370007 PPARGC1BQ86YN6 1023 aaKnown RBP11.89□□□□□ -0.51
NOLC1-201ENST00000370007 HRCP23327 699 aa11.88□□□□□ -0.51
NOLC1-201ENST00000370007 SCAF1Q9H7N4 1312 aaKnown RBP11.78□□□□□ -0.52
NOLC1-201ENST00000370007 PRKCSHP14314 528 aaPredicted RBP11.75□□□□□ -0.53
NOLC1-201ENST00000370007 BCL11AQ9H165 835 aa11.59□□□□□ -0.55
NOLC1-201ENST00000370007 TTBK1Q5TCY1 1321 aaPredicted RBP11.56□□□□□ -0.56
NOLC1-201ENST00000370007 PCGF6Q9BYE7 350 aa11.49□□□□□ -0.57
NOLC1-201ENST00000370007 FAM9AQ8IZU1 332 aaPredicted RBP11.49□□□□□ -0.57
NOLC1-201ENST00000370007 ABCC9O60706 1549 aa11.48□□□□□ -0.57
NOLC1-201ENST00000370007 RB1CC1Q8TDY2 1594 aa11.37□□□□□ -0.59
NOLC1-201ENST00000370007 MYO15BQ96JP2 1530 aa11.35□□□□□ -0.59
NOLC1-201ENST00000370007 NACADO15069 1562 aa11.34□□□□□ -0.59
NOLC1-201ENST00000370007 SHROOM4Q9ULL8 1493 aa11.28□□□□□ -0.6
NOLC1-201ENST00000370007 ERICH6Q7L0X2 663 aa11.26□□□□□ -0.61
NOLC1-201ENST00000370007 GTF3C3Q9Y5Q9 886 aa11.26□□□□□ -0.61
NOLC1-201ENST00000370007 CENPBP07199 599 aaPredicted RBP11.22□□□□□ -0.61
NOLC1-201ENST00000370007 NEUROD1Q13562 356 aa11.21□□□□□ -0.62
NOLC1-201ENST00000370007 ACIN1Q9UKV3 1341 aaKnown RBP11.18□□□□□ -0.62
NOLC1-201ENST00000370007 APLP2Q06481 763 aa11.16□□□□□ -0.62
NOLC1-201ENST00000370007 DCAF1Q9Y4B6 1507 aa11.08□□□□□ -0.64
NOLC1-201ENST00000370007 CSRNP3Q8WYN3 585 aa11□□□□□ -0.65
NOLC1-201ENST00000370007 SLC24A1O60721 1099 aa10.98□□□□□ -0.65
NOLC1-201ENST00000370007 ANP32EQ9BTT0 268 aa10.97□□□□□ -0.65
NOLC1-201ENST00000370007 ANO8Q9HCE9 1232 aaPredicted RBP10.87□□□□□ -0.67
NOLC1-201ENST00000370007 ZEB1P37275 1124 aaPredicted RBP10.83□□□□□ -0.68
NOLC1-201ENST00000370007 YTHDC1Q96MU7 727 aaKnown RBP10.82□□□□□ -0.68
NOLC1-201ENST00000370007 ZCCHC6Q5VYS8 1495 aaKnown RBP10.77□□□□□ -0.69
NOLC1-201ENST00000370007 UNC13AQ9UPW8 1703 aa10.76□□□□□ -0.69
NOLC1-201ENST00000370007 BICRAQ9NZM4 1560 aa10.74□□□□□ -0.69
NOLC1-201ENST00000370007 EIF5BO60841 1220 aaKnown RBP10.73□□□□□ -0.69
NOLC1-201ENST00000370007 CCDC136Q96JN2 1154 aa10.73□□□□□ -0.69
NOLC1-201ENST00000370007 PLEKHG5O94827 1062 aa10.72□□□□□ -0.69
NOLC1-201ENST00000370007 SUPT5HO00267 1087 aaKnown RBP10.72□□□□□ -0.69
NOLC1-201ENST00000370007 TRIM26Q12899 539 aaPredicted RBP10.67□□□□□ -0.7
NOLC1-201ENST00000370007 DIEXFQ68CQ4 756 aaKnown RBP10.63□□□□□ -0.71
NOLC1-201ENST00000370007 SALL2Q9Y467 1007 aaPredicted RBP10.62□□□□□ -0.71
NOLC1-201ENST00000370007 DCAF8L2P0C7V8 631 aa10.61□□□□□ -0.71
NOLC1-201ENST00000370007 TSHZ2Q9NRE2 1034 aa10.6□□□□□ -0.71
NOLC1-201ENST00000370007 DNAJC5BQ9UF47 199 aa10.59□□□□□ -0.71
NOLC1-201ENST00000370007 EIF4G1Q04637 1599 aaKnown RBP10.56□□□□□ -0.72
NOLC1-201ENST00000370007 CECR2Q9BXF3 1484 aa10.55□□□□□ -0.72
NOLC1-201ENST00000370007 CC2D2AQ9P2K1 1620 aa10.54□□□□□ -0.72
NOLC1-201ENST00000370007 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.54□□□□□ -0.72
NOLC1-201ENST00000370007 UBE2Q2Q8WVN8 375 aa10.53□□□□□ -0.72
NOLC1-201ENST00000370007 LOC105371045A0A1W2PR82 267 aa10.5□□□□□ -0.73
NOLC1-201ENST00000370007 DAXXQ9UER7 740 aaPredicted RBP10.49□□□□□ -0.73
NOLC1-201ENST00000370007 PABPN1Q86U42 306 aaKnown RBP eCLIP10.48□□□□□ -0.73
NOLC1-201ENST00000370007 PODXL2Q9NZ53 605 aa10.46□□□□□ -0.73
NOLC1-201ENST00000370007 CUX2O14529 1486 aa10.46□□□□□ -0.74
NOLC1-201ENST00000370007 PKNOX2Q96KN3 472 aa10.45□□□□□ -0.74
NOLC1-201ENST00000370007 CHIC1Q5VXU3 224 aa10.44□□□□□ -0.74
NOLC1-201ENST00000370007 SUPT16HQ9Y5B9 1047 aaKnown RBP10.43□□□□□ -0.74
NOLC1-201ENST00000370007 SCRIBQ14160 1630 aa10.42□□□□□ -0.74
NOLC1-201ENST00000370007 RTN4Q9NQC3 1192 aaKnown RBP10.41□□□□□ -0.74
NOLC1-201ENST00000370007 BCANQ96GW7 911 aa10.39□□□□□ -0.75
NOLC1-201ENST00000370007 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.38□□□□□ -0.75
NOLC1-201ENST00000370007 DEKP35659 375 aaKnown RBP10.37□□□□□ -0.75
NOLC1-201ENST00000370007 SMARCA2P51531 1590 aa10.35□□□□□ -0.75
NOLC1-201ENST00000370007 NCAPD3P42695 1498 aa10.35□□□□□ -0.75
NOLC1-201ENST00000370007 HMGXB3Q12766 1538 aa10.35□□□□□ -0.75
NOLC1-201ENST00000370007 CCER1Q8TC90 406 aaPredicted RBP10.34□□□□□ -0.75
NOLC1-201ENST00000370007 EHMT2Q96KQ7 1210 aa10.33□□□□□ -0.76
NOLC1-201ENST00000370007 MIER1Q8N108 512 aa10.31□□□□□ -0.76
NOLC1-201ENST00000370007 RBM19Q9Y4C8 960 aaKnown RBP10.29□□□□□ -0.76
NOLC1-201ENST00000370007 MSH5O43196 834 aa10.28□□□□□ -0.76
NOLC1-201ENST00000370007 IL27Q8NEV9 243 aa10.25□□□□□ -0.77
NOLC1-201ENST00000370007 PEG3Q9GZU2 1588 aa10.25□□□□□ -0.77
NOLC1-201ENST00000370007 AEBP2Q6ZN18 517 aaPredicted RBP10.24□□□□□ -0.77
NOLC1-201ENST00000370007 DNAJC5Q9H3Z4 198 aa10.24□□□□□ -0.77
NOLC1-201ENST00000370007 BAZ1AQ9NRL2 1556 aaPredicted RBP10.22□□□□□ -0.77
NOLC1-201ENST00000370007 LAMC3Q9Y6N6 1575 aa10.2□□□□□ -0.78
NOLC1-201ENST00000370007 A0A0U1RQG5 324 aaPredicted RBP10.19□□□□□ -0.78
NOLC1-201ENST00000370007 NBR1Q14596 966 aa10.19□□□□□ -0.78
NOLC1-201ENST00000370007 TRIM41Q8WV44 630 aa10.19□□□□□ -0.78
NOLC1-201ENST00000370007 ITGAEP38570 1179 aa10.17□□□□□ -0.78
NOLC1-201ENST00000370007 ERICH6BQ5W0A0 696 aa10.16□□□□□ -0.78
NOLC1-201ENST00000370007 ZNF316A6NFI3 1004 aaPredicted RBP10.16□□□□□ -0.78
NOLC1-201ENST00000370007 ATAD2BQ9ULI0 1458 aa10.15□□□□□ -0.78
NOLC1-201ENST00000370007 SMARCA4P51532 1647 aa10.14□□□□□ -0.79
NOLC1-201ENST00000370007 TIMELESSQ9UNS1 1208 aa10.14□□□□□ -0.79
NOLC1-201ENST00000370007 ERCC6Q03468 1493 aa10.14□□□□□ -0.79
NOLC1-201ENST00000370007 PDS5BQ9NTI5 1447 aa10.12□□□□□ -0.79
NOLC1-201ENST00000370007 FKBP8Q14318 412 aa10.09□□□□□ -0.79
NOLC1-201ENST00000370007 BAZ1BQ9UIG0 1483 aaKnown RBP10.08□□□□□ -0.8
NOLC1-201ENST00000370007 VSIG10Q8N0Z9 540 aa10.07□□□□□ -0.8
NOLC1-201ENST00000370007 MYT1LQ9UL68 1186 aa10.07□□□□□ -0.8
NOLC1-201ENST00000370007 CLSPNQ9HAW4 1339 aa10.06□□□□□ -0.8
NOLC1-201ENST00000370007 ZMYND15Q9H091 742 aa10.06□□□□□ -0.8
NOLC1-201ENST00000370007 PDE4CQ08493 712 aa10.02□□□□□ -0.81
NOLC1-201ENST00000370007 NEFLP07196 543 aa10.02□□□□□ -0.81
NOLC1-201ENST00000370007 THOC2Q8NI27 1593 aaKnown RBP9.99□□□□□ -0.81
NOLC1-201ENST00000370007 BCL11BQ9C0K0 894 aaPredicted RBP9.97□□□□□ -0.81
NOLC1-201ENST00000370007 MRC2Q9UBG0 1479 aa9.96□□□□□ -0.81
NOLC1-201ENST00000370007 RTL5Q5HYW3 569 aaPredicted RBP9.96□□□□□ -0.81
NOLC1-201ENST00000370007 WDR62O43379 1518 aa9.94□□□□□ -0.82
NOLC1-201ENST00000370007 PDIA4P13667 645 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 913.5 ms