RNA–Protein interactions for RNA: ENST00000369568.8

GAB3-201, Transcript of GRB2 associated binding protein 3, humanhuman

APPRIS ALT2 TSL 2

Gene GAB3, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAB3-201ENST00000369568 NISCHQ9Y2I1 1504 aa26.54■■□□□ 1.84
GAB3-201ENST00000369568 DCAF8L2P0C7V8 631 aa23.86■■□□□ 1.41
GAB3-201ENST00000369568 SHROOM4Q9ULL8 1493 aa23.13■■□□□ 1.29
GAB3-201ENST00000369568 ABCC9O60706 1549 aa22.52■■□□□ 1.2
GAB3-201ENST00000369568 SUPT5HO00267 1087 aaKnown RBP22.52■■□□□ 1.2
GAB3-201ENST00000369568 CCDC180Q9P1Z9 1646 aa22.49■■□□□ 1.19
GAB3-201ENST00000369568 ZCCHC6Q5VYS8 1495 aaKnown RBP22.14■■□□□ 1.13
GAB3-201ENST00000369568 PABPN1Q86U42 306 aaKnown RBP eCLIP21.71■■□□□ 1.07
GAB3-201ENST00000369568 SCRIBQ14160 1630 aa21.63■■□□□ 1.05
GAB3-201ENST00000369568 DCAF1Q9Y4B6 1507 aa21.37■■□□□ 1.01
GAB3-201ENST00000369568 NACADO15069 1562 aa21.31■■□□□ 1
GAB3-201ENST00000369568 RB1CC1Q8TDY2 1594 aa21.29■■□□□ 1
GAB3-201ENST00000369568 EHMT2Q96KQ7 1210 aa21.17■□□□□ 0.98
GAB3-201ENST00000369568 FAM9AQ8IZU1 332 aaPredicted RBP21.01■□□□□ 0.95
GAB3-201ENST00000369568 MYO15BQ96JP2 1530 aa20.98■□□□□ 0.95
GAB3-201ENST00000369568 CECR2Q9BXF3 1484 aa20.97■□□□□ 0.95
GAB3-201ENST00000369568 CHIC1Q5VXU3 224 aa20.91■□□□□ 0.94
GAB3-201ENST00000369568 RSF1Q96T23 1441 aaPredicted RBP20.87■□□□□ 0.93
GAB3-201ENST00000369568 TRIM41Q8WV44 630 aa20.86■□□□□ 0.93
GAB3-201ENST00000369568 MROH2BQ7Z745 1585 aa20.69■□□□□ 0.9
GAB3-201ENST00000369568 LOC105371045A0A1W2PR82 267 aa20.58■□□□□ 0.88
GAB3-201ENST00000369568 BAZ1AQ9NRL2 1556 aaPredicted RBP20.5■□□□□ 0.87
GAB3-201ENST00000369568 WIZO95785 1651 aa20.48■□□□□ 0.87
GAB3-201ENST00000369568 RANGAP1P46060 587 aaPredicted RBP20.4■□□□□ 0.86
GAB3-201ENST00000369568 UNC13AQ9UPW8 1703 aa20.38■□□□□ 0.85
GAB3-201ENST00000369568 BICRAQ9NZM4 1560 aa20.37■□□□□ 0.85
GAB3-201ENST00000369568 SMARCA4P51532 1647 aa20.29■□□□□ 0.84
GAB3-201ENST00000369568 BAZ1BQ9UIG0 1483 aaKnown RBP20.28■□□□□ 0.84
GAB3-201ENST00000369568 TTBK1Q5TCY1 1321 aaPredicted RBP20.22■□□□□ 0.83
GAB3-201ENST00000369568 UBTFP17480 764 aaKnown RBP20.21■□□□□ 0.83
GAB3-201ENST00000369568 CCDC88BA6NC98 1476 aa20.19■□□□□ 0.82
GAB3-201ENST00000369568 ATAD2BQ9ULI0 1458 aa20.16■□□□□ 0.82
GAB3-201ENST00000369568 PPARGC1BQ86YN6 1023 aaKnown RBP20.12■□□□□ 0.81
GAB3-201ENST00000369568 TOP2AP11388 1531 aaKnown RBP20.06■□□□□ 0.8
GAB3-201ENST00000369568 EIF4G1Q04637 1599 aaKnown RBP20.04■□□□□ 0.8
GAB3-201ENST00000369568 SMARCA2P51531 1590 aa20.03■□□□□ 0.8
GAB3-201ENST00000369568 PCGF6Q9BYE7 350 aa19.98■□□□□ 0.79
GAB3-201ENST00000369568 ABCC8Q09428 1581 aa19.97■□□□□ 0.79
GAB3-201ENST00000369568 DNAJC5BQ9UF47 199 aa19.96■□□□□ 0.79
GAB3-201ENST00000369568 CSRNP3Q8WYN3 585 aa19.87■□□□□ 0.77
GAB3-201ENST00000369568 WRNQ14191 1432 aaPredicted RBP eCLIP19.85■□□□□ 0.774e-6■■■■□ 19.5
GAB3-201ENST00000369568 NCAPD3P42695 1498 aa19.8■□□□□ 0.76
GAB3-201ENST00000369568 CC2D2AQ9P2K1 1620 aa19.79■□□□□ 0.76
GAB3-201ENST00000369568 ATP1B4Q9UN42 357 aaPredicted RBP19.79■□□□□ 0.76
GAB3-201ENST00000369568 SOGA1O94964 1423 aa19.75■□□□□ 0.75
GAB3-201ENST00000369568 APLP2Q06481 763 aa19.75■□□□□ 0.75
GAB3-201ENST00000369568 CADPSQ9ULU8 1353 aa19.67■□□□□ 0.74
GAB3-201ENST00000369568 RUSC2Q8N2Y8 1516 aa19.6■□□□□ 0.73
GAB3-201ENST00000369568 NESP48681 1621 aa19.59■□□□□ 0.73
GAB3-201ENST00000369568 PEG3Q9GZU2 1588 aa19.58■□□□□ 0.72
GAB3-201ENST00000369568 FBLN2P98095 1184 aa19.57■□□□□ 0.72
GAB3-201ENST00000369568 P3H3Q8IVL6 736 aa19.57■□□□□ 0.72
GAB3-201ENST00000369568 HMGXB3Q12766 1538 aa19.54■□□□□ 0.72
GAB3-201ENST00000369568 FANCD2Q9BXW9 1451 aa19.46■□□□□ 0.71
GAB3-201ENST00000369568 TRIM26Q12899 539 aaPredicted RBP19.45■□□□□ 0.7
GAB3-201ENST00000369568 CFTRP13569 1480 aa19.44■□□□□ 0.7
GAB3-201ENST00000369568 ERCC6Q03468 1493 aa19.42■□□□□ 0.7
GAB3-201ENST00000369568 CUX2O14529 1486 aa19.41■□□□□ 0.7
GAB3-201ENST00000369568 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
GAB3-201ENST00000369568 PDS5BQ9NTI5 1447 aa19.39■□□□□ 0.69
GAB3-201ENST00000369568 KIF27Q86VH2 1401 aa19.38■□□□□ 0.69
GAB3-201ENST00000369568 TDRD9Q8NDG6 1382 aaKnown RBP19.38■□□□□ 0.69
GAB3-201ENST00000369568 ARID3CA6NKF2 412 aa19.35■□□□□ 0.69
GAB3-201ENST00000369568 EEA1Q15075 1411 aa19.34■□□□□ 0.69
GAB3-201ENST00000369568 CEP164Q9UPV0 1460 aa19.32■□□□□ 0.68
GAB3-201ENST00000369568 ITGAEP38570 1179 aa19.32■□□□□ 0.68
GAB3-201ENST00000369568 CEP162Q5TB80 1403 aa19.31■□□□□ 0.68
GAB3-201ENST00000369568 GOLGA3Q08378 1498 aa19.3■□□□□ 0.68
GAB3-201ENST00000369568 HNRNPUL2Q1KMD3 747 aaKnown RBP19.29■□□□□ 0.68
GAB3-201ENST00000369568 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.29■□□□□ 0.68
GAB3-201ENST00000369568 RAD54L2Q9Y4B4 1467 aa19.29■□□□□ 0.68
GAB3-201ENST00000369568 CUX1P39880 1505 aa19.27■□□□□ 0.67
GAB3-201ENST00000369568 FGD5Q6ZNL6 1462 aa19.26■□□□□ 0.67
GAB3-201ENST00000369568 CLIP1P30622 1438 aa19.24■□□□□ 0.67
GAB3-201ENST00000369568 TNIKQ9UKE5 1360 aa19.23■□□□□ 0.67
GAB3-201ENST00000369568 RAPGEF2Q9Y4G8 1499 aa19.23■□□□□ 0.67
GAB3-201ENST00000369568 CARMIL1Q5VZK9 1371 aa19.22■□□□□ 0.67
GAB3-201ENST00000369568 CCER1Q8TC90 406 aaPredicted RBP19.17■□□□□ 0.66
GAB3-201ENST00000369568 CHMP7Q8WUX9 453 aaPredicted RBP19.17■□□□□ 0.66
GAB3-201ENST00000369568 TOP2BQ02880 1626 aa19.13■□□□□ 0.65
GAB3-201ENST00000369568 IGF1RP08069 1367 aa19.11■□□□□ 0.65
GAB3-201ENST00000369568 TOPBP1Q92547 1522 aa19.1■□□□□ 0.65
GAB3-201ENST00000369568 POLA1P09884 1462 aaPredicted RBP19.06■□□□□ 0.64
GAB3-201ENST00000369568 AQRO60306 1485 aaKnown RBP eCLIP19.05■□□□□ 0.642e-7■■■■■ 37.3
GAB3-201ENST00000369568 FAM50AQ14320 339 aaKnown RBP19.02■□□□□ 0.64
GAB3-201ENST00000369568 LAMC3Q9Y6N6 1575 aa19.02■□□□□ 0.64
GAB3-201ENST00000369568 URB2Q14146 1524 aaKnown RBP19■□□□□ 0.63
GAB3-201ENST00000369568 HRCP23327 699 aa18.97■□□□□ 0.63
GAB3-201ENST00000369568 GAPVD1Q14C86 1478 aa18.95■□□□□ 0.62
GAB3-201ENST00000369568 DNMBPQ6XZF7 1577 aa18.94■□□□□ 0.62
GAB3-201ENST00000369568 MRC2Q9UBG0 1479 aa18.92■□□□□ 0.62
GAB3-201ENST00000369568 KANK4Q5T7N3 995 aaPredicted RBP18.9■□□□□ 0.62
GAB3-201ENST00000369568 BIVM-ERCC5R4GMW8 1640 aa18.88■□□□□ 0.61
GAB3-201ENST00000369568 PRXQ9BXM0 1461 aa18.86■□□□□ 0.61
GAB3-201ENST00000369568 FHOD3Q2V2M9 1422 aa18.84■□□□□ 0.61
GAB3-201ENST00000369568 KIF21AQ7Z4S6 1674 aa18.84■□□□□ 0.61
GAB3-201ENST00000369568 VPS8Q8N3P4 1428 aa18.83■□□□□ 0.61
GAB3-201ENST00000369568 ZNF608Q9ULD9 1512 aaPredicted RBP18.81■□□□□ 0.6
GAB3-201ENST00000369568 ABCA10Q8WWZ4 1543 aa18.79■□□□□ 0.6
GAB3-201ENST00000369568 KIF21BO75037 1637 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms