RNA–Protein interactions for RNA: ENST00000369555.6

HIPK1-204, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 5 BASIC

Gene HIPK1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-204ENST00000369555 NISCHQ9Y2I1 1504 aa13.23□□□□□ -0.29
HIPK1-204ENST00000369555 DCAF8L2P0C7V8 631 aa12.74□□□□□ -0.37
HIPK1-204ENST00000369555 ABCC9O60706 1549 aa12.07□□□□□ -0.48
HIPK1-204ENST00000369555 PABPN1Q86U42 306 aaKnown RBP eCLIP11.65□□□□□ -0.54
HIPK1-204ENST00000369555 SHROOM4Q9ULL8 1493 aa11.62□□□□□ -0.55
HIPK1-204ENST00000369555 CCDC180Q9P1Z9 1646 aa11.29□□□□□ -0.6
HIPK1-204ENST00000369555 SUPT5HO00267 1087 aaKnown RBP11.22□□□□□ -0.61
HIPK1-204ENST00000369555 RB1CC1Q8TDY2 1594 aa11.11□□□□□ -0.63
HIPK1-204ENST00000369555 SCRIBQ14160 1630 aa11.01□□□□□ -0.65
HIPK1-204ENST00000369555 NACADO15069 1562 aa10.95□□□□□ -0.66
HIPK1-204ENST00000369555 DNAJC5BQ9UF47 199 aa10.92□□□□□ -0.66
HIPK1-204ENST00000369555 ZCCHC6Q5VYS8 1495 aaKnown RBP10.88□□□□□ -0.67
HIPK1-204ENST00000369555 EHMT2Q96KQ7 1210 aa10.75□□□□□ -0.69
HIPK1-204ENST00000369555 CECR2Q9BXF3 1484 aa10.69□□□□□ -0.7
HIPK1-204ENST00000369555 FBLN2P98095 1184 aa10.66□□□□□ -0.7
HIPK1-204ENST00000369555 TTBK1Q5TCY1 1321 aaPredicted RBP10.61□□□□□ -0.71
HIPK1-204ENST00000369555 ERCC6Q03468 1493 aa10.61□□□□□ -0.71
HIPK1-204ENST00000369555 RANGAP1P46060 587 aaPredicted RBP10.57□□□□□ -0.72
HIPK1-204ENST00000369555 FAM9AQ8IZU1 332 aaPredicted RBP10.55□□□□□ -0.72
HIPK1-204ENST00000369555 DCAF1Q9Y4B6 1507 aa10.52□□□□□ -0.73
HIPK1-204ENST00000369555 MYO15BQ96JP2 1530 aa10.49□□□□□ -0.73
HIPK1-204ENST00000369555 BAZ1BQ9UIG0 1483 aaKnown RBP10.47□□□□□ -0.73
HIPK1-204ENST00000369555 EIF4G1Q04637 1599 aaKnown RBP10.42□□□□□ -0.74
HIPK1-204ENST00000369555 TRIM41Q8WV44 630 aa10.41□□□□□ -0.74
HIPK1-204ENST00000369555 CC2D2AQ9P2K1 1620 aa10.41□□□□□ -0.74
HIPK1-204ENST00000369555 ATP1B4Q9UN42 357 aaPredicted RBP10.38□□□□□ -0.75
HIPK1-204ENST00000369555 BICRAQ9NZM4 1560 aa10.38□□□□□ -0.75
HIPK1-204ENST00000369555 BAZ1AQ9NRL2 1556 aaPredicted RBP10.32□□□□□ -0.76
HIPK1-204ENST00000369555 ATAD2BQ9ULI0 1458 aa10.3□□□□□ -0.76
HIPK1-204ENST00000369555 MROH2BQ7Z745 1585 aa10.29□□□□□ -0.76
HIPK1-204ENST00000369555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.29□□□□□ -0.76
HIPK1-204ENST00000369555 HNRNPUL2Q1KMD3 747 aaKnown RBP10.29□□□□□ -0.76
HIPK1-204ENST00000369555 CHMP7Q8WUX9 453 aaPredicted RBP10.28□□□□□ -0.76
HIPK1-204ENST00000369555 RSF1Q96T23 1441 aaPredicted RBP10.27□□□□□ -0.76
HIPK1-204ENST00000369555 SMARCA2P51531 1590 aa10.27□□□□□ -0.77
HIPK1-204ENST00000369555 PDS5BQ9NTI5 1447 aa10.27□□□□□ -0.77
HIPK1-204ENST00000369555 TRHP20396 242 aaPredicted RBP10.27□□□□□ -0.77
HIPK1-204ENST00000369555 UNC13AQ9UPW8 1703 aa10.26□□□□□ -0.77
HIPK1-204ENST00000369555 UBTFP17480 764 aaKnown RBP10.24□□□□□ -0.77
HIPK1-204ENST00000369555 NESP48681 1621 aa10.23□□□□□ -0.77
HIPK1-204ENST00000369555 CADPSQ9ULU8 1353 aa10.2□□□□□ -0.78
HIPK1-204ENST00000369555 ARID3CA6NKF2 412 aa10.18□□□□□ -0.78
HIPK1-204ENST00000369555 NCAPD3P42695 1498 aa10.17□□□□□ -0.78
HIPK1-204ENST00000369555 SMARCA4P51532 1647 aa10.17□□□□□ -0.78
HIPK1-204ENST00000369555 MYT1LQ9UL68 1186 aa10.16□□□□□ -0.78
HIPK1-204ENST00000369555 CYB5RLQ6IPT4 315 aa10.14□□□□□ -0.79
HIPK1-204ENST00000369555 NPM1P06748 294 aaKnown RBP eCLIP10.13□□□□□ -0.79
HIPK1-204ENST00000369555 OSCARQ8IYS5 282 aa10.13□□□□□ -0.79
HIPK1-204ENST00000369555 WIZO95785 1651 aa10.13□□□□□ -0.79
HIPK1-204ENST00000369555 P3H3Q8IVL6 736 aa10.1□□□□□ -0.79
HIPK1-204ENST00000369555 TDRD9Q8NDG6 1382 aaKnown RBP10.1□□□□□ -0.79
HIPK1-204ENST00000369555 CEP164Q9UPV0 1460 aa10.1□□□□□ -0.79
HIPK1-204ENST00000369555 FANCD2Q9BXW9 1451 aa10.08□□□□□ -0.8
HIPK1-204ENST00000369555 CCDC88BA6NC98 1476 aa10.06□□□□□ -0.8
HIPK1-204ENST00000369555 APLP2Q06481 763 aa10.06□□□□□ -0.8
HIPK1-204ENST00000369555 PLPPR3Q6T4P5 718 aa10.02□□□□□ -0.81
HIPK1-204ENST00000369555 SOGA1O94964 1423 aa9.99□□□□□ -0.81
HIPK1-204ENST00000369555 CHIC1Q5VXU3 224 aa9.97□□□□□ -0.81
HIPK1-204ENST00000369555 TOP2AP11388 1531 aaKnown RBP9.95□□□□□ -0.82
HIPK1-204ENST00000369555 HMGXB3Q12766 1538 aa9.94□□□□□ -0.82
HIPK1-204ENST00000369555 KCNH8Q96L42 1107 aa9.94□□□□□ -0.82
HIPK1-204ENST00000369555 MRC2Q9UBG0 1479 aa9.93□□□□□ -0.82
HIPK1-204ENST00000369555 WRNQ14191 1432 aaPredicted RBP eCLIP9.93□□□□□ -0.82
HIPK1-204ENST00000369555 AQRO60306 1485 aaKnown RBP eCLIP9.93□□□□□ -0.823e-7■■■■□ 26.6
HIPK1-204ENST00000369555 DNAJC5Q9H3Z4 198 aa9.91□□□□□ -0.82
HIPK1-204ENST00000369555 CUX2O14529 1486 aa9.9□□□□□ -0.82
HIPK1-204ENST00000369555 RAD54L2Q9Y4B4 1467 aa9.89□□□□□ -0.83
HIPK1-204ENST00000369555 CSRNP3Q8WYN3 585 aa9.88□□□□□ -0.83
HIPK1-204ENST00000369555 AEBP2Q6ZN18 517 aaPredicted RBP9.87□□□□□ -0.83
HIPK1-204ENST00000369555 CFTRP13569 1480 aa9.86□□□□□ -0.83
HIPK1-204ENST00000369555 LAMC3Q9Y6N6 1575 aa9.85□□□□□ -0.83
HIPK1-204ENST00000369555 PPARGC1BQ86YN6 1023 aaKnown RBP9.85□□□□□ -0.83
HIPK1-204ENST00000369555 LOC105371045A0A1W2PR82 267 aa9.84□□□□□ -0.83
HIPK1-204ENST00000369555 ABCC8Q09428 1581 aa9.82□□□□□ -0.84
HIPK1-204ENST00000369555 JPH4Q96JJ6 628 aa9.82□□□□□ -0.84
HIPK1-204ENST00000369555 ZNF777Q9ULD5 760 aaPredicted RBP9.81□□□□□ -0.84
HIPK1-204ENST00000369555 KIF27Q86VH2 1401 aa9.8□□□□□ -0.84
HIPK1-204ENST00000369555 FGD5Q6ZNL6 1462 aa9.79□□□□□ -0.84
HIPK1-204ENST00000369555 ARID4BQ4LE39 1312 aaPredicted RBP9.78□□□□□ -0.84
HIPK1-204ENST00000369555 ITGAEP38570 1179 aa9.77□□□□□ -0.85
HIPK1-204ENST00000369555 TOPBP1Q92547 1522 aa9.77□□□□□ -0.85
HIPK1-204ENST00000369555 ZNF608Q9ULD9 1512 aaPredicted RBP9.76□□□□□ -0.85
HIPK1-204ENST00000369555 IFT140Q96RY7 1462 aa9.76□□□□□ -0.85
HIPK1-204ENST00000369555 CARMIL1Q5VZK9 1371 aa9.76□□□□□ -0.85
HIPK1-204ENST00000369555 GAPVD1Q14C86 1478 aa9.75□□□□□ -0.85
HIPK1-204ENST00000369555 FAM69CQ0P6D2 419 aa9.74□□□□□ -0.85
HIPK1-204ENST00000369555 ESF1Q9H501 851 aaKnown RBP9.74□□□□□ -0.85
HIPK1-204ENST00000369555 URB2Q14146 1524 aaKnown RBP9.74□□□□□ -0.85
HIPK1-204ENST00000369555 POLA1P09884 1462 aaPredicted RBP9.72□□□□□ -0.85
HIPK1-204ENST00000369555 CDK11AQ9UQ88 783 aaPredicted RBP9.71□□□□□ -0.85
HIPK1-204ENST00000369555 SNAPC4Q5SXM2 1469 aa9.69□□□□□ -0.86
HIPK1-204ENST00000369555 PEG3Q9GZU2 1588 aa9.69□□□□□ -0.86
HIPK1-204ENST00000369555 KIF21AQ7Z4S6 1674 aa9.69□□□□□ -0.86
HIPK1-204ENST00000369555 PLEKHD1A6NEE1 506 aa9.69□□□□□ -0.86
HIPK1-204ENST00000369555 MLECQ14165 292 aa9.69□□□□□ -0.86
HIPK1-204ENST00000369555 GRIN2BQ13224 1484 aa9.68□□□□□ -0.86
HIPK1-204ENST00000369555 CARMIL2Q6F5E8 1435 aa9.66□□□□□ -0.86
HIPK1-204ENST00000369555 PTPRGP23470 1445 aa9.63□□□□□ -0.87
HIPK1-204ENST00000369555 DNMBPQ6XZF7 1577 aa9.63□□□□□ -0.87
HIPK1-204ENST00000369555 FAM50AQ14320 339 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms