RNA–Protein interactions for RNA: ENST00000369494.5

ATP1A1-202, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 3

Gene ATP1A1, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-202ENST00000369494 NISCHQ9Y2I1 1504 aa21.96■■□□□ 1.11
ATP1A1-202ENST00000369494 AEBP2Q6ZN18 517 aaPredicted RBP21.15■□□□□ 0.98
ATP1A1-202ENST00000369494 CHIC1Q5VXU3 224 aa20.13■□□□□ 0.81
ATP1A1-202ENST00000369494 CCDC180Q9P1Z9 1646 aa19.51■□□□□ 0.71
ATP1A1-202ENST00000369494 ABCC9O60706 1549 aa18.98■□□□□ 0.63
ATP1A1-202ENST00000369494 ZCCHC6Q5VYS8 1495 aaKnown RBP18.34■□□□□ 0.53
ATP1A1-202ENST00000369494 NACADO15069 1562 aa18.3■□□□□ 0.52
ATP1A1-202ENST00000369494 RB1CC1Q8TDY2 1594 aa18.3■□□□□ 0.52
ATP1A1-202ENST00000369494 MYO15BQ96JP2 1530 aa18.24■□□□□ 0.51
ATP1A1-202ENST00000369494 DCAF8L2P0C7V8 631 aa18.21■□□□□ 0.51
ATP1A1-202ENST00000369494 DCAF1Q9Y4B6 1507 aa18.19■□□□□ 0.5
ATP1A1-202ENST00000369494 SENP3Q9H4L4 574 aaPredicted RBP17.94■□□□□ 0.46
ATP1A1-202ENST00000369494 UNC13AQ9UPW8 1703 aa17.89■□□□□ 0.45
ATP1A1-202ENST00000369494 SCRIBQ14160 1630 aa17.8■□□□□ 0.44
ATP1A1-202ENST00000369494 BICRAQ9NZM4 1560 aa17.77■□□□□ 0.44
ATP1A1-202ENST00000369494 PHF23Q9BUL5 403 aaPredicted RBP17.74■□□□□ 0.43
ATP1A1-202ENST00000369494 PABPN1Q86U42 306 aaKnown RBP eCLIP17.71■□□□□ 0.43
ATP1A1-202ENST00000369494 SHROOM4Q9ULL8 1493 aa17.59■□□□□ 0.41
ATP1A1-202ENST00000369494 DNAJC5BQ9UF47 199 aa17.32■□□□□ 0.36
ATP1A1-202ENST00000369494 EIF4G1Q04637 1599 aaKnown RBP17.28■□□□□ 0.36
ATP1A1-202ENST00000369494 CC2D2AQ9P2K1 1620 aa17.18■□□□□ 0.34
ATP1A1-202ENST00000369494 CECR2Q9BXF3 1484 aa17.1■□□□□ 0.33
ATP1A1-202ENST00000369494 SMARCA4P51532 1647 aa17.03■□□□□ 0.32
ATP1A1-202ENST00000369494 BAZ1AQ9NRL2 1556 aaPredicted RBP17.02■□□□□ 0.31
ATP1A1-202ENST00000369494 MROH2BQ7Z745 1585 aa16.94■□□□□ 0.3
ATP1A1-202ENST00000369494 ATAD2BQ9ULI0 1458 aa16.92■□□□□ 0.3
ATP1A1-202ENST00000369494 SMARCA2P51531 1590 aa16.89■□□□□ 0.3
ATP1A1-202ENST00000369494 NCAPD3P42695 1498 aa16.88■□□□□ 0.29
ATP1A1-202ENST00000369494 PEG3Q9GZU2 1588 aa16.88■□□□□ 0.29
ATP1A1-202ENST00000369494 HMGXB3Q12766 1538 aa16.84■□□□□ 0.29
ATP1A1-202ENST00000369494 BAZ1BQ9UIG0 1483 aaKnown RBP16.78■□□□□ 0.28
ATP1A1-202ENST00000369494 RSF1Q96T23 1441 aaPredicted RBP16.76■□□□□ 0.27
ATP1A1-202ENST00000369494 FOXD1Q16676 465 aa16.75■□□□□ 0.27
ATP1A1-202ENST00000369494 WIZO95785 1651 aa16.74■□□□□ 0.27
ATP1A1-202ENST00000369494 TOP2AP11388 1531 aaKnown RBP16.6■□□□□ 0.25
ATP1A1-202ENST00000369494 NESP48681 1621 aa16.45■□□□□ 0.22
ATP1A1-202ENST00000369494 LAMC3Q9Y6N6 1575 aa16.43■□□□□ 0.22
ATP1A1-202ENST00000369494 CADPSQ9ULU8 1353 aa16.38■□□□□ 0.21
ATP1A1-202ENST00000369494 CCDC88BA6NC98 1476 aa16.37■□□□□ 0.21
ATP1A1-202ENST00000369494 ERCC6Q03468 1493 aa16.34■□□□□ 0.21
ATP1A1-202ENST00000369494 SUPT5HO00267 1087 aaKnown RBP16.33■□□□□ 0.2
ATP1A1-202ENST00000369494 CFTRP13569 1480 aa16.32■□□□□ 0.2
ATP1A1-202ENST00000369494 PDS5BQ9NTI5 1447 aa16.29■□□□□ 0.2
ATP1A1-202ENST00000369494 KIF21AQ7Z4S6 1674 aa16.27■□□□□ 0.19
ATP1A1-202ENST00000369494 THOC2Q8NI27 1593 aaKnown RBP16.22■□□□□ 0.19
ATP1A1-202ENST00000369494 FANCD2Q9BXW9 1451 aa16.21■□□□□ 0.19
ATP1A1-202ENST00000369494 PRDM2Q13029 1718 aa16.2■□□□□ 0.18
ATP1A1-202ENST00000369494 CEP164Q9UPV0 1460 aa16.18■□□□□ 0.18
ATP1A1-202ENST00000369494 CUX2O14529 1486 aa16.16■□□□□ 0.18
ATP1A1-202ENST00000369494 MRC2Q9UBG0 1479 aa16.15■□□□□ 0.18
ATP1A1-202ENST00000369494 WDR62O43379 1518 aa16.11■□□□□ 0.17
ATP1A1-202ENST00000369494 PLPPR3Q6T4P5 718 aa16.08■□□□□ 0.16
ATP1A1-202ENST00000369494 URB2Q14146 1524 aaKnown RBP16.05■□□□□ 0.16
ATP1A1-202ENST00000369494 DNMBPQ6XZF7 1577 aa15.96■□□□□ 0.15
ATP1A1-202ENST00000369494 TOPBP1Q92547 1522 aa15.96■□□□□ 0.15
ATP1A1-202ENST00000369494 ABCC8Q09428 1581 aa15.94■□□□□ 0.14
ATP1A1-202ENST00000369494 CUX1P39880 1505 aa15.89■□□□□ 0.13
ATP1A1-202ENST00000369494 POLA1P09884 1462 aaPredicted RBP15.84■□□□□ 0.13
ATP1A1-202ENST00000369494 IFT140Q96RY7 1462 aa15.84■□□□□ 0.13
ATP1A1-202ENST00000369494 FGD5Q6ZNL6 1462 aa15.81■□□□□ 0.12
ATP1A1-202ENST00000369494 TARBP1Q13395 1621 aaKnown RBP15.79■□□□□ 0.12
ATP1A1-202ENST00000369494 WRNQ14191 1432 aaPredicted RBP eCLIP15.79■□□□□ 0.12
ATP1A1-202ENST00000369494 SYNJ1O43426 1573 aa15.78■□□□□ 0.12
ATP1A1-202ENST00000369494 BIVM-ERCC5R4GMW8 1640 aa15.77■□□□□ 0.12
ATP1A1-202ENST00000369494 PPP6R1Q9UPN7 881 aa15.77■□□□□ 0.12
ATP1A1-202ENST00000369494 ZNF608Q9ULD9 1512 aaPredicted RBP15.77■□□□□ 0.11
ATP1A1-202ENST00000369494 TOP2BQ02880 1626 aa15.76■□□□□ 0.11
ATP1A1-202ENST00000369494 RAD54L2Q9Y4B4 1467 aa15.76■□□□□ 0.11
ATP1A1-202ENST00000369494 SOGA1O94964 1423 aa15.74■□□□□ 0.11
ATP1A1-202ENST00000369494 EIF4G3O43432 1585 aaKnown RBP15.73■□□□□ 0.11
ATP1A1-202ENST00000369494 ADRA2BP18089 450 aa15.71■□□□□ 0.11
ATP1A1-202ENST00000369494 WDR97A6NE52 1622 aa15.7■□□□□ 0.1
ATP1A1-202ENST00000369494 ABCA10Q8WWZ4 1543 aa15.67■□□□□ 0.1
ATP1A1-202ENST00000369494 AQRO60306 1485 aaKnown RBP eCLIP15.66■□□□□ 0.13e-7■■□□□ 13.9
ATP1A1-202ENST00000369494 PIAS4Q8N2W9 510 aaPredicted RBP15.65■□□□□ 0.1
ATP1A1-202ENST00000369494 TDRD9Q8NDG6 1382 aaKnown RBP15.64■□□□□ 0.09
ATP1A1-202ENST00000369494 ABCA5Q8WWZ7 1642 aa15.61■□□□□ 0.09
ATP1A1-202ENST00000369494 GAPVD1Q14C86 1478 aa15.58■□□□□ 0.08
ATP1A1-202ENST00000369494 MSH5O43196 834 aa15.57■□□□□ 0.08
ATP1A1-202ENST00000369494 GRIN2BQ13224 1484 aa15.57■□□□□ 0.08
ATP1A1-202ENST00000369494 PBRM1Q86U86 1689 aa15.55■□□□□ 0.08
ATP1A1-202ENST00000369494 SNAPC4Q5SXM2 1469 aa15.55■□□□□ 0.08
ATP1A1-202ENST00000369494 MAGI1Q96QZ7 1491 aaPredicted RBP15.52■□□□□ 0.08
ATP1A1-202ENST00000369494 DNAJC5Q9H3Z4 198 aa15.51■□□□□ 0.07
ATP1A1-202ENST00000369494 CHD1O14646 1710 aa15.48■□□□□ 0.07
ATP1A1-202ENST00000369494 ERICH3Q5RHP9 1530 aa15.48■□□□□ 0.07
ATP1A1-202ENST00000369494 SYNJ2O15056 1496 aa15.46■□□□□ 0.07
ATP1A1-202ENST00000369494 ADAMTS12P58397 1594 aa15.46■□□□□ 0.07
ATP1A1-202ENST00000369494 KIF27Q86VH2 1401 aa15.45■□□□□ 0.06
ATP1A1-202ENST00000369494 OSCARQ8IYS5 282 aa15.44■□□□□ 0.06
ATP1A1-202ENST00000369494 TRIM41Q8WV44 630 aa15.42■□□□□ 0.06
ATP1A1-202ENST00000369494 FBLN2P98095 1184 aa15.41■□□□□ 0.06
ATP1A1-202ENST00000369494 FHAD1B1AJZ9 1412 aa15.4■□□□□ 0.06
ATP1A1-202ENST00000369494 CHMP7Q8WUX9 453 aaPredicted RBP15.39■□□□□ 0.05
ATP1A1-202ENST00000369494 GRIN2AQ12879 1464 aa15.38■□□□□ 0.05
ATP1A1-202ENST00000369494 IGF1RP08069 1367 aa15.36■□□□□ 0.05
ATP1A1-202ENST00000369494 CLASP1Q7Z460 1538 aa15.35■□□□□ 0.05
ATP1A1-202ENST00000369494 CUL7Q14999 1698 aa15.35■□□□□ 0.05
ATP1A1-202ENST00000369494 RUSC2Q8N2Y8 1516 aa15.34■□□□□ 0.05
ATP1A1-202ENST00000369494 NUP160Q12769 1436 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms