RNA–Protein interactions for RNA: ENST00000368964.3

SETDB1-204, Transcript of SET domain bifurcated 1, humanhuman

TSL 5

Gene SETDB1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETDB1-204ENST00000368964 AEBP2Q6ZN18 517 aaPredicted RBP18.74■□□□□ 0.59
SETDB1-204ENST00000368964 CHIC1Q5VXU3 224 aa18.48■□□□□ 0.55
SETDB1-204ENST00000368964 PHF23Q9BUL5 403 aaPredicted RBP16.22■□□□□ 0.19
SETDB1-204ENST00000368964 SENP3Q9H4L4 574 aaPredicted RBP15.97■□□□□ 0.15
SETDB1-204ENST00000368964 PLPPR3Q6T4P5 718 aa15.1■□□□□ 0.01
SETDB1-204ENST00000368964 NISCHQ9Y2I1 1504 aa14.96□□□□□ -0.02
SETDB1-204ENST00000368964 FOXD1Q16676 465 aa14.76□□□□□ -0.05
SETDB1-204ENST00000368964 ADRA2BP18089 450 aa14.27□□□□□ -0.13
SETDB1-204ENST00000368964 PPP6R1Q9UPN7 881 aa14.27□□□□□ -0.13
SETDB1-204ENST00000368964 PIAS4Q8N2W9 510 aaPredicted RBP13.96□□□□□ -0.17
SETDB1-204ENST00000368964 MSH5O43196 834 aa13.62□□□□□ -0.23
SETDB1-204ENST00000368964 CCDC180Q9P1Z9 1646 aa13.32□□□□□ -0.28
SETDB1-204ENST00000368964 ABCC9O60706 1549 aa13.29□□□□□ -0.28
SETDB1-204ENST00000368964 PPP4R3CPQ6ZMV5 832 aa13.28□□□□□ -0.28
SETDB1-204ENST00000368964 SCAF1Q9H7N4 1312 aaKnown RBP13.18□□□□□ -0.3
SETDB1-204ENST00000368964 KCNA4P22459 653 aa13.07□□□□□ -0.32
SETDB1-204ENST00000368964 NCBP3Q53F19 620 aaKnown RBP13.04□□□□□ -0.32
SETDB1-204ENST00000368964 CNKSR2Q8WXI2 1034 aa12.92□□□□□ -0.34
SETDB1-204ENST00000368964 MAPK8IP2Q13387 824 aaPredicted RBP12.9□□□□□ -0.34
SETDB1-204ENST00000368964 NPM3O75607 178 aaKnown RBP12.77□□□□□ -0.37
SETDB1-204ENST00000368964 DMRT2Q9Y5R5 561 aa12.75□□□□□ -0.37
SETDB1-204ENST00000368964 DCAF8L2P0C7V8 631 aa12.65□□□□□ -0.38
SETDB1-204ENST00000368964 RNF216Q9NWF9 866 aaPredicted RBP12.64□□□□□ -0.39
SETDB1-204ENST00000368964 RB1CC1Q8TDY2 1594 aa12.62□□□□□ -0.39
SETDB1-204ENST00000368964 HOXD11P31277 338 aaPredicted RBP12.54□□□□□ -0.4
SETDB1-204ENST00000368964 NACADO15069 1562 aa12.54□□□□□ -0.4
SETDB1-204ENST00000368964 SLC4A1APQ9BWU0 796 aaKnown RBP12.51□□□□□ -0.41
SETDB1-204ENST00000368964 DNAJC5BQ9UF47 199 aa12.46□□□□□ -0.41
SETDB1-204ENST00000368964 ZCCHC6Q5VYS8 1495 aaKnown RBP12.45□□□□□ -0.42
SETDB1-204ENST00000368964 PABPN1Q86U42 306 aaKnown RBP eCLIP12.41□□□□□ -0.42
SETDB1-204ENST00000368964 UNC13AQ9UPW8 1703 aa12.4□□□□□ -0.43
SETDB1-204ENST00000368964 MYO15BQ96JP2 1530 aa12.35□□□□□ -0.43
SETDB1-204ENST00000368964 BICRAQ9NZM4 1560 aa12.29□□□□□ -0.44
SETDB1-204ENST00000368964 DCAF1Q9Y4B6 1507 aa12.28□□□□□ -0.44
SETDB1-204ENST00000368964 SCRIBQ14160 1630 aa12.28□□□□□ -0.44
SETDB1-204ENST00000368964 EHMT2Q96KQ7 1210 aa12.25□□□□□ -0.45
SETDB1-204ENST00000368964 DCAF8L1A6NGE4 600 aa12.17□□□□□ -0.46
SETDB1-204ENST00000368964 POTEDQ86YR6 584 aa12.13□□□□□ -0.47
SETDB1-204ENST00000368964 CSRNP3Q8WYN3 585 aa12.07□□□□□ -0.48
SETDB1-204ENST00000368964 FOXD4L1Q9NU39 408 aa12.04□□□□□ -0.48
SETDB1-204ENST00000368964 SLC4A2P04920 1241 aa12.01□□□□□ -0.49
SETDB1-204ENST00000368964 SHROOM4Q9ULL8 1493 aa12.01□□□□□ -0.49
SETDB1-204ENST00000368964 ZBTB22O15209 634 aa12□□□□□ -0.49
SETDB1-204ENST00000368964 CC2D2AQ9P2K1 1620 aa11.97□□□□□ -0.49
SETDB1-204ENST00000368964 EIF4G1Q04637 1599 aaKnown RBP11.96□□□□□ -0.49
SETDB1-204ENST00000368964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.95□□□□□ -0.52e-6■■■■□ 21
SETDB1-204ENST00000368964 CECR2Q9BXF3 1484 aa11.9□□□□□ -0.5
SETDB1-204ENST00000368964 MYCNP04198 464 aaPredicted RBP11.83□□□□□ -0.52
SETDB1-204ENST00000368964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.73□□□□□ -0.53
SETDB1-204ENST00000368964 HNRNPUL2Q1KMD3 747 aaKnown RBP11.73□□□□□ -0.53
SETDB1-204ENST00000368964 U3KPZ7 1027 aaPredicted RBP11.73□□□□□ -0.53
SETDB1-204ENST00000368964 ATXN8OSP0DMR3 200 aa11.67□□□□□ -0.54
SETDB1-204ENST00000368964 SAMD1Q6SPF0 538 aaPredicted RBP11.66□□□□□ -0.54
SETDB1-204ENST00000368964 SMARCA4P51532 1647 aa11.66□□□□□ -0.54
SETDB1-204ENST00000368964 RNF39Q9H2S5 420 aa11.65□□□□□ -0.54
SETDB1-204ENST00000368964 ATAD2BQ9ULI0 1458 aa11.61□□□□□ -0.55
SETDB1-204ENST00000368964 APLP2Q06481 763 aa11.6□□□□□ -0.55
SETDB1-204ENST00000368964 BAZ1AQ9NRL2 1556 aaPredicted RBP11.58□□□□□ -0.55
SETDB1-204ENST00000368964 MROH2BQ7Z745 1585 aa11.58□□□□□ -0.56
SETDB1-204ENST00000368964 NCAPD3P42695 1498 aa11.57□□□□□ -0.56
SETDB1-204ENST00000368964 SMARCA2P51531 1590 aa11.56□□□□□ -0.56
SETDB1-204ENST00000368964 C1QBPQ07021 282 aaKnown RBP11.56□□□□□ -0.56
SETDB1-204ENST00000368964 BAZ1BQ9UIG0 1483 aaKnown RBP11.53□□□□□ -0.56
SETDB1-204ENST00000368964 HMGXB3Q12766 1538 aa11.53□□□□□ -0.56
SETDB1-204ENST00000368964 PEG3Q9GZU2 1588 aa11.48□□□□□ -0.57
SETDB1-204ENST00000368964 WIZO95785 1651 aa11.47□□□□□ -0.57
SETDB1-204ENST00000368964 NESP48681 1621 aa11.47□□□□□ -0.57
SETDB1-204ENST00000368964 ERCC6Q03468 1493 aa11.44□□□□□ -0.58
SETDB1-204ENST00000368964 ATF5Q9Y2D1 282 aaPredicted RBP11.43□□□□□ -0.58
SETDB1-204ENST00000368964 RSF1Q96T23 1441 aaPredicted RBP11.36□□□□□ -0.59
SETDB1-204ENST00000368964 ZNF219Q9P2Y4 722 aaPredicted RBP11.36□□□□□ -0.59
SETDB1-204ENST00000368964 SPINK5Q9NQ38 1064 aaPredicted RBP11.35□□□□□ -0.59
SETDB1-204ENST00000368964 CAPN15O75808 1086 aa11.34□□□□□ -0.59
SETDB1-204ENST00000368964 KIF21AQ7Z4S6 1674 aa11.31□□□□□ -0.6
SETDB1-204ENST00000368964 TRHP20396 242 aaPredicted RBP11.31□□□□□ -0.6
SETDB1-204ENST00000368964 LAMC3Q9Y6N6 1575 aa11.3□□□□□ -0.6
SETDB1-204ENST00000368964 TOP2AP11388 1531 aaKnown RBP11.29□□□□□ -0.6
SETDB1-204ENST00000368964 THOC2Q8NI27 1593 aaKnown RBP11.28□□□□□ -0.6
SETDB1-204ENST00000368964 CUX2O14529 1486 aa11.27□□□□□ -0.6
SETDB1-204ENST00000368964 CACNB1Q02641 598 aaPredicted RBP11.27□□□□□ -0.61
SETDB1-204ENST00000368964 CADPSQ9ULU8 1353 aa11.25□□□□□ -0.61
SETDB1-204ENST00000368964 PDS5BQ9NTI5 1447 aa11.23□□□□□ -0.61
SETDB1-204ENST00000368964 POLA2Q14181 598 aa11.17□□□□□ -0.62
SETDB1-204ENST00000368964 CCDC88BA6NC98 1476 aa11.17□□□□□ -0.62
SETDB1-204ENST00000368964 FANCD2Q9BXW9 1451 aa11.17□□□□□ -0.62
SETDB1-204ENST00000368964 MRC2Q9UBG0 1479 aa11.17□□□□□ -0.62
SETDB1-204ENST00000368964 CFTRP13569 1480 aa11.16□□□□□ -0.62
SETDB1-204ENST00000368964 CEP164Q9UPV0 1460 aa11.16□□□□□ -0.62
SETDB1-204ENST00000368964 WDR62O43379 1518 aa11.13□□□□□ -0.63
SETDB1-204ENST00000368964 DSG3P32926 999 aa11.12□□□□□ -0.63
SETDB1-204ENST00000368964 ABCB7O75027 752 aa11.1□□□□□ -0.63
SETDB1-204ENST00000368964 DNAJC5Q9H3Z4 198 aa11.09□□□□□ -0.63
SETDB1-204ENST00000368964 URB2Q14146 1524 aaKnown RBP11.09□□□□□ -0.63
SETDB1-204ENST00000368964 PRDM2Q13029 1718 aa11.08□□□□□ -0.64
SETDB1-204ENST00000368964 SUPT5HO00267 1087 aaKnown RBP11.07□□□□□ -0.64
SETDB1-204ENST00000368964 ZBTB12Q9Y330 459 aaPredicted RBP11.06□□□□□ -0.64
SETDB1-204ENST00000368964 FBLN2P98095 1184 aa11.04□□□□□ -0.64
SETDB1-204ENST00000368964 TOPBP1Q92547 1522 aa10.98□□□□□ -0.65
SETDB1-204ENST00000368964 MKRN4PQ13434 485 aaPredicted RBP10.95□□□□□ -0.66
SETDB1-204ENST00000368964 ZNF608Q9ULD9 1512 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms