RNA–Protein interactions for RNA: ENST00000367980.6

NR1I3-202, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-202ENST00000367980 AEBP2Q6ZN18 517 aaPredicted RBP20.09■□□□□ 0.81
NR1I3-202ENST00000367980 CHIC1Q5VXU3 224 aa19.37■□□□□ 0.69
NR1I3-202ENST00000367980 NISCHQ9Y2I1 1504 aa17.33■□□□□ 0.36
NR1I3-202ENST00000367980 PHF23Q9BUL5 403 aaPredicted RBP17.09■□□□□ 0.33
NR1I3-202ENST00000367980 SENP3Q9H4L4 574 aaPredicted RBP16.96■□□□□ 0.3
NR1I3-202ENST00000367980 FOXD1Q16676 465 aa15.84■□□□□ 0.13
NR1I3-202ENST00000367980 PLPPR3Q6T4P5 718 aa15.62■□□□□ 0.09
NR1I3-202ENST00000367980 CCDC180Q9P1Z9 1646 aa15.29■□□□□ 0.04
NR1I3-202ENST00000367980 PPP6R1Q9UPN7 881 aa15.16■□□□□ 0.02
NR1I3-202ENST00000367980 ADRA2BP18089 450 aa15.11■□□□□ 0.01
NR1I3-202ENST00000367980 PIAS4Q8N2W9 510 aaPredicted RBP14.85□□□□□ -0.03
NR1I3-202ENST00000367980 ABCC9O60706 1549 aa14.73□□□□□ -0.05
NR1I3-202ENST00000367980 MSH5O43196 834 aa14.58□□□□□ -0.07
NR1I3-202ENST00000367980 ZCCHC6Q5VYS8 1495 aaKnown RBP14.48□□□□□ -0.09
NR1I3-202ENST00000367980 DCAF1Q9Y4B6 1507 aa14.33□□□□□ -0.11
NR1I3-202ENST00000367980 DCAF8L2P0C7V8 631 aa14.3□□□□□ -0.12
NR1I3-202ENST00000367980 MYO15BQ96JP2 1530 aa14.3□□□□□ -0.12
NR1I3-202ENST00000367980 NACADO15069 1562 aa14.29□□□□□ -0.12
NR1I3-202ENST00000367980 RB1CC1Q8TDY2 1594 aa14.24□□□□□ -0.13
NR1I3-202ENST00000367980 UNC13AQ9UPW8 1703 aa14.08□□□□□ -0.16
NR1I3-202ENST00000367980 SCRIBQ14160 1630 aa13.97□□□□□ -0.17
NR1I3-202ENST00000367980 BICRAQ9NZM4 1560 aa13.91□□□□□ -0.18
NR1I3-202ENST00000367980 PABPN1Q86U42 306 aaKnown RBP eCLIP13.81□□□□□ -0.2
NR1I3-202ENST00000367980 SHROOM4Q9ULL8 1493 aa13.81□□□□□ -0.2
NR1I3-202ENST00000367980 MAPK8IP2Q13387 824 aaPredicted RBP13.79□□□□□ -0.2
NR1I3-202ENST00000367980 PPP4R3CPQ6ZMV5 832 aa13.79□□□□□ -0.2
NR1I3-202ENST00000367980 SCAF1Q9H7N4 1312 aaKnown RBP13.7□□□□□ -0.22
NR1I3-202ENST00000367980 POTEDQ86YR6 584 aa13.65□□□□□ -0.22
NR1I3-202ENST00000367980 DNAJC5BQ9UF47 199 aa13.6□□□□□ -0.23
NR1I3-202ENST00000367980 DMRT2Q9Y5R5 561 aa13.53□□□□□ -0.24
NR1I3-202ENST00000367980 CECR2Q9BXF3 1484 aa13.52□□□□□ -0.25
NR1I3-202ENST00000367980 EIF4G1Q04637 1599 aaKnown RBP13.46□□□□□ -0.26
NR1I3-202ENST00000367980 CNKSR2Q8WXI2 1034 aa13.4□□□□□ -0.26
NR1I3-202ENST00000367980 SMARCA4P51532 1647 aa13.4□□□□□ -0.26
NR1I3-202ENST00000367980 MROH2BQ7Z745 1585 aa13.39□□□□□ -0.27
NR1I3-202ENST00000367980 BAZ1AQ9NRL2 1556 aaPredicted RBP13.38□□□□□ -0.27
NR1I3-202ENST00000367980 CC2D2AQ9P2K1 1620 aa13.36□□□□□ -0.27
NR1I3-202ENST00000367980 RSF1Q96T23 1441 aaPredicted RBP13.31□□□□□ -0.28
NR1I3-202ENST00000367980 KCNA4P22459 653 aa13.3□□□□□ -0.28
NR1I3-202ENST00000367980 NCBP3Q53F19 620 aaKnown RBP13.3□□□□□ -0.28
NR1I3-202ENST00000367980 PEG3Q9GZU2 1588 aa13.28□□□□□ -0.28
NR1I3-202ENST00000367980 WIZO95785 1651 aa13.27□□□□□ -0.28
NR1I3-202ENST00000367980 ATAD2BQ9ULI0 1458 aa13.26□□□□□ -0.29
NR1I3-202ENST00000367980 NCAPD3P42695 1498 aa13.21□□□□□ -0.29
NR1I3-202ENST00000367980 SMARCA2P51531 1590 aa13.2□□□□□ -0.3
NR1I3-202ENST00000367980 NPM3O75607 178 aaKnown RBP13.19□□□□□ -0.3
NR1I3-202ENST00000367980 HOXD11P31277 338 aaPredicted RBP13.19□□□□□ -0.3
NR1I3-202ENST00000367980 RNF216Q9NWF9 866 aaPredicted RBP13.18□□□□□ -0.3
NR1I3-202ENST00000367980 HMGXB3Q12766 1538 aa13.15□□□□□ -0.3
NR1I3-202ENST00000367980 BAZ1BQ9UIG0 1483 aaKnown RBP13.12□□□□□ -0.31
NR1I3-202ENST00000367980 TOP2AP11388 1531 aaKnown RBP13.08□□□□□ -0.31
NR1I3-202ENST00000367980 SUPT5HO00267 1087 aaKnown RBP13.08□□□□□ -0.32
NR1I3-202ENST00000367980 DCAF8L1A6NGE4 600 aa12.97□□□□□ -0.33
NR1I3-202ENST00000367980 CCDC88BA6NC98 1476 aa12.95□□□□□ -0.34
NR1I3-202ENST00000367980 NESP48681 1621 aa12.86□□□□□ -0.35
NR1I3-202ENST00000367980 CADPSQ9ULU8 1353 aa12.81□□□□□ -0.36
NR1I3-202ENST00000367980 CFTRP13569 1480 aa12.81□□□□□ -0.36
NR1I3-202ENST00000367980 LAMC3Q9Y6N6 1575 aa12.81□□□□□ -0.36
NR1I3-202ENST00000367980 PRDM2Q13029 1718 aa12.78□□□□□ -0.36
NR1I3-202ENST00000367980 ERCC6Q03468 1493 aa12.75□□□□□ -0.37
NR1I3-202ENST00000367980 CUX2O14529 1486 aa12.73□□□□□ -0.37
NR1I3-202ENST00000367980 KIF21AQ7Z4S6 1674 aa12.73□□□□□ -0.37
NR1I3-202ENST00000367980 FANCD2Q9BXW9 1451 aa12.67□□□□□ -0.38
NR1I3-202ENST00000367980 PDS5BQ9NTI5 1447 aa12.66□□□□□ -0.38
NR1I3-202ENST00000367980 CEP164Q9UPV0 1460 aa12.61□□□□□ -0.39
NR1I3-202ENST00000367980 THOC2Q8NI27 1593 aaKnown RBP12.6□□□□□ -0.39
NR1I3-202ENST00000367980 SLC4A1APQ9BWU0 796 aaKnown RBP12.59□□□□□ -0.39
NR1I3-202ENST00000367980 DNAJC5Q9H3Z4 198 aa12.59□□□□□ -0.39
NR1I3-202ENST00000367980 URB2Q14146 1524 aaKnown RBP12.57□□□□□ -0.4
NR1I3-202ENST00000367980 ABCC8Q09428 1581 aa12.57□□□□□ -0.4
NR1I3-202ENST00000367980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.56□□□□□ -0.4
NR1I3-202ENST00000367980 MRC2Q9UBG0 1479 aa12.55□□□□□ -0.4
NR1I3-202ENST00000367980 CUX1P39880 1505 aa12.54□□□□□ -0.4
NR1I3-202ENST00000367980 WDR62O43379 1518 aa12.53□□□□□ -0.4
NR1I3-202ENST00000367980 SLC4A2P04920 1241 aa12.53□□□□□ -0.4
NR1I3-202ENST00000367980 RNF39Q9H2S5 420 aa12.53□□□□□ -0.4
NR1I3-202ENST00000367980 EHMT2Q96KQ7 1210 aa12.52□□□□□ -0.41
NR1I3-202ENST00000367980 TOPBP1Q92547 1522 aa12.52□□□□□ -0.41
NR1I3-202ENST00000367980 SYNJ1O43426 1573 aa12.51□□□□□ -0.41
NR1I3-202ENST00000367980 DNMBPQ6XZF7 1577 aa12.51□□□□□ -0.41
NR1I3-202ENST00000367980 BIVM-ERCC5R4GMW8 1640 aa12.49□□□□□ -0.41
NR1I3-202ENST00000367980 WRNQ14191 1432 aaPredicted RBP eCLIP12.48□□□□□ -0.41
NR1I3-202ENST00000367980 TOP2BQ02880 1626 aa12.48□□□□□ -0.41
NR1I3-202ENST00000367980 POLA1P09884 1462 aaPredicted RBP12.42□□□□□ -0.42
NR1I3-202ENST00000367980 FGD5Q6ZNL6 1462 aa12.42□□□□□ -0.42
NR1I3-202ENST00000367980 TARBP1Q13395 1621 aaKnown RBP12.4□□□□□ -0.42
NR1I3-202ENST00000367980 RAD54L2Q9Y4B4 1467 aa12.38□□□□□ -0.43
NR1I3-202ENST00000367980 U3KPZ7 1027 aaPredicted RBP12.37□□□□□ -0.43
NR1I3-202ENST00000367980 WDR97A6NE52 1622 aa12.37□□□□□ -0.43
NR1I3-202ENST00000367980 SOGA1O94964 1423 aa12.35□□□□□ -0.43
NR1I3-202ENST00000367980 C1QBPQ07021 282 aaKnown RBP12.33□□□□□ -0.44
NR1I3-202ENST00000367980 IFT140Q96RY7 1462 aa12.33□□□□□ -0.44
NR1I3-202ENST00000367980 ZNF608Q9ULD9 1512 aaPredicted RBP12.33□□□□□ -0.44
NR1I3-202ENST00000367980 CACNB1Q02641 598 aaPredicted RBP12.32□□□□□ -0.44
NR1I3-202ENST00000367980 TRIM41Q8WV44 630 aa12.31□□□□□ -0.44
NR1I3-202ENST00000367980 ABCA10Q8WWZ4 1543 aa12.31□□□□□ -0.44
NR1I3-202ENST00000367980 ZBTB22O15209 634 aa12.28□□□□□ -0.44
NR1I3-202ENST00000367980 AQRO60306 1485 aaKnown RBP eCLIP12.27□□□□□ -0.44
NR1I3-202ENST00000367980 ABCA5Q8WWZ7 1642 aa12.27□□□□□ -0.44
NR1I3-202ENST00000367980 TDRD9Q8NDG6 1382 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms