RNA–Protein interactions for RNA: ENST00000366929.4

TGFB2-201, Transcript of transforming growth factor beta 2, humanhuman

TSL 1 (best) BASIC

Gene TGFB2, Length 5,053 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB2-201ENST00000366929 DCAF8L2P0C7V8 631 aa17.05■□□□□ 0.32
TGFB2-201ENST00000366929 NISCHQ9Y2I1 1504 aa16.98■□□□□ 0.31
TGFB2-201ENST00000366929 ABCC9O60706 1549 aa16.08■□□□□ 0.17
TGFB2-201ENST00000366929 PABPN1Q86U42 306 aaKnown RBP eCLIP15.47■□□□□ 0.07
TGFB2-201ENST00000366929 RB1CC1Q8TDY2 1594 aa14.87□□□□□ -0.03
TGFB2-201ENST00000366929 SHROOM4Q9ULL8 1493 aa14.77□□□□□ -0.04
TGFB2-201ENST00000366929 FAM9AQ8IZU1 332 aaPredicted RBP14.76□□□□□ -0.05
TGFB2-201ENST00000366929 CCDC180Q9P1Z9 1646 aa14.73□□□□□ -0.05
TGFB2-201ENST00000366929 TRIM41Q8WV44 630 aa14.61□□□□□ -0.07
TGFB2-201ENST00000366929 ERCC6Q03468 1493 aa14.56□□□□□ -0.08
TGFB2-201ENST00000366929 NACADO15069 1562 aa14.52□□□□□ -0.09
TGFB2-201ENST00000366929 FBLN2P98095 1184 aa14.47□□□□□ -0.09
TGFB2-201ENST00000366929 DNAJC5BQ9UF47 199 aa14.47□□□□□ -0.09
TGFB2-201ENST00000366929 AEBP2Q6ZN18 517 aaPredicted RBP14.45□□□□□ -0.1
TGFB2-201ENST00000366929 TRHP20396 242 aaPredicted RBP14.42□□□□□ -0.1
TGFB2-201ENST00000366929 CECR2Q9BXF3 1484 aa14.41□□□□□ -0.1
TGFB2-201ENST00000366929 SCRIBQ14160 1630 aa14.41□□□□□ -0.1
TGFB2-201ENST00000366929 SUPT5HO00267 1087 aaKnown RBP14.31□□□□□ -0.12
TGFB2-201ENST00000366929 TTBK1Q5TCY1 1321 aaPredicted RBP14.2□□□□□ -0.14
TGFB2-201ENST00000366929 NPM1P06748 294 aaKnown RBP eCLIP14.17□□□□□ -0.14
TGFB2-201ENST00000366929 MYT1LQ9UL68 1186 aa14.04□□□□□ -0.16
TGFB2-201ENST00000366929 OSCARQ8IYS5 282 aa13.98□□□□□ -0.17
TGFB2-201ENST00000366929 DNAJC5Q9H3Z4 198 aa13.96□□□□□ -0.17
TGFB2-201ENST00000366929 CHMP7Q8WUX9 453 aaPredicted RBP13.96□□□□□ -0.18
TGFB2-201ENST00000366929 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.95□□□□□ -0.18
TGFB2-201ENST00000366929 HNRNPUL2Q1KMD3 747 aaKnown RBP13.95□□□□□ -0.18
TGFB2-201ENST00000366929 PDS5BQ9NTI5 1447 aa13.91□□□□□ -0.18
TGFB2-201ENST00000366929 ATP1B4Q9UN42 357 aaPredicted RBP13.87□□□□□ -0.19
TGFB2-201ENST00000366929 BAZ1BQ9UIG0 1483 aaKnown RBP13.85□□□□□ -0.19
TGFB2-201ENST00000366929 ZCCHC6Q5VYS8 1495 aaKnown RBP13.84□□□□□ -0.19
TGFB2-201ENST00000366929 CYB5RLQ6IPT4 315 aa13.83□□□□□ -0.2
TGFB2-201ENST00000366929 RANGAP1P46060 587 aaPredicted RBP13.78□□□□□ -0.2
TGFB2-201ENST00000366929 CC2D2AQ9P2K1 1620 aa13.76□□□□□ -0.21
TGFB2-201ENST00000366929 MYO15BQ96JP2 1530 aa13.72□□□□□ -0.21
TGFB2-201ENST00000366929 EIF4G1Q04637 1599 aaKnown RBP13.7□□□□□ -0.22
TGFB2-201ENST00000366929 PLPPR3Q6T4P5 718 aa13.7□□□□□ -0.22
TGFB2-201ENST00000366929 EHMT2Q96KQ7 1210 aa13.7□□□□□ -0.22
TGFB2-201ENST00000366929 ESF1Q9H501 851 aaKnown RBP13.67□□□□□ -0.22
TGFB2-201ENST00000366929 SMARCA2P51531 1590 aa13.62□□□□□ -0.23
TGFB2-201ENST00000366929 DCAF1Q9Y4B6 1507 aa13.58□□□□□ -0.24
TGFB2-201ENST00000366929 APLP2Q06481 763 aa13.54□□□□□ -0.24
TGFB2-201ENST00000366929 ARID4BQ4LE39 1312 aaPredicted RBP13.53□□□□□ -0.24
TGFB2-201ENST00000366929 CUX2O14529 1486 aa13.51□□□□□ -0.25
TGFB2-201ENST00000366929 CADPSQ9ULU8 1353 aa13.5□□□□□ -0.25
TGFB2-201ENST00000366929 CEP164Q9UPV0 1460 aa13.48□□□□□ -0.25
TGFB2-201ENST00000366929 CHIC1Q5VXU3 224 aa13.47□□□□□ -0.25
TGFB2-201ENST00000366929 BAZ1AQ9NRL2 1556 aaPredicted RBP13.46□□□□□ -0.26
TGFB2-201ENST00000366929 UBTFP17480 764 aaKnown RBP13.44□□□□□ -0.26
TGFB2-201ENST00000366929 ATAD2BQ9ULI0 1458 aa13.42□□□□□ -0.26
TGFB2-201ENST00000366929 NCAPD3P42695 1498 aa13.39□□□□□ -0.27
TGFB2-201ENST00000366929 ARID3CA6NKF2 412 aa13.34□□□□□ -0.27
TGFB2-201ENST00000366929 KCNH8Q96L42 1107 aa13.33□□□□□ -0.28
TGFB2-201ENST00000366929 MRC2Q9UBG0 1479 aa13.32□□□□□ -0.28
TGFB2-201ENST00000366929 BICRAQ9NZM4 1560 aa13.31□□□□□ -0.28
TGFB2-201ENST00000366929 FANCD2Q9BXW9 1451 aa13.29□□□□□ -0.28
TGFB2-201ENST00000366929 FAM69CQ0P6D2 419 aa13.29□□□□□ -0.28
TGFB2-201ENST00000366929 NESP48681 1621 aa13.28□□□□□ -0.28
TGFB2-201ENST00000366929 SCAF1Q9H7N4 1312 aaKnown RBP13.25□□□□□ -0.29
TGFB2-201ENST00000366929 BCANQ96GW7 911 aa13.24□□□□□ -0.29
TGFB2-201ENST00000366929 TDRD9Q8NDG6 1382 aaKnown RBP13.23□□□□□ -0.29
TGFB2-201ENST00000366929 CDK11AQ9UQ88 783 aaPredicted RBP13.22□□□□□ -0.29
TGFB2-201ENST00000366929 SOGA1O94964 1423 aa13.21□□□□□ -0.29
TGFB2-201ENST00000366929 ABCC8Q09428 1581 aa13.18□□□□□ -0.3
TGFB2-201ENST00000366929 P3H3Q8IVL6 736 aa13.16□□□□□ -0.3
TGFB2-201ENST00000366929 MLECQ14165 292 aa13.1□□□□□ -0.31
TGFB2-201ENST00000366929 SMARCA4P51532 1647 aa13.1□□□□□ -0.31
TGFB2-201ENST00000366929 STAG3Q9UJ98 1225 aa13.1□□□□□ -0.31
TGFB2-201ENST00000366929 LAMC3Q9Y6N6 1575 aa13.09□□□□□ -0.31
TGFB2-201ENST00000366929 IFT140Q96RY7 1462 aa13.08□□□□□ -0.32
TGFB2-201ENST00000366929 CARMIL2Q6F5E8 1435 aa13.07□□□□□ -0.32
TGFB2-201ENST00000366929 HMGXB3Q12766 1538 aa13.06□□□□□ -0.32
TGFB2-201ENST00000366929 JPH4Q96JJ6 628 aa13.06□□□□□ -0.32
TGFB2-201ENST00000366929 PLEKHD1A6NEE1 506 aa13.05□□□□□ -0.32
TGFB2-201ENST00000366929 ZNF777Q9ULD5 760 aaPredicted RBP13.04□□□□□ -0.32
TGFB2-201ENST00000366929 MROH2BQ7Z745 1585 aa13.04□□□□□ -0.32
TGFB2-201ENST00000366929 WRNQ14191 1432 aaPredicted RBP eCLIP13.04□□□□□ -0.32
TGFB2-201ENST00000366929 RSF1Q96T23 1441 aaPredicted RBP13□□□□□ -0.33
TGFB2-201ENST00000366929 AQRO60306 1485 aaKnown RBP eCLIP13□□□□□ -0.33
TGFB2-201ENST00000366929 SENP3Q9H4L4 574 aaPredicted RBP12.99□□□□□ -0.33
TGFB2-201ENST00000366929 PHF23Q9BUL5 403 aaPredicted RBP12.98□□□□□ -0.33
TGFB2-201ENST00000366929 UNC13AQ9UPW8 1703 aa12.98□□□□□ -0.33
TGFB2-201ENST00000366929 C14orf37Q86TY3 774 aa12.93□□□□□ -0.34
TGFB2-201ENST00000366929 PTPRGP23470 1445 aa12.9□□□□□ -0.35
TGFB2-201ENST00000366929 KIF27Q86VH2 1401 aa12.88□□□□□ -0.35
TGFB2-201ENST00000366929 GRIN2BQ13224 1484 aa12.87□□□□□ -0.35
TGFB2-201ENST00000366929 CCDC88BA6NC98 1476 aa12.84□□□□□ -0.35
TGFB2-201ENST00000366929 GAPVD1Q14C86 1478 aa12.83□□□□□ -0.36
TGFB2-201ENST00000366929 CFTRP13569 1480 aa12.82□□□□□ -0.36
TGFB2-201ENST00000366929 TOP2AP11388 1531 aaKnown RBP12.81□□□□□ -0.36
TGFB2-201ENST00000366929 FOXD1Q16676 465 aa12.79□□□□□ -0.36
TGFB2-201ENST00000366929 RAD54L2Q9Y4B4 1467 aa12.78□□□□□ -0.36
TGFB2-201ENST00000366929 DMRT2Q9Y5R5 561 aa12.78□□□□□ -0.36
TGFB2-201ENST00000366929 SNAPC4Q5SXM2 1469 aa12.78□□□□□ -0.36
TGFB2-201ENST00000366929 CHGAP10645 457 aaKnown RBP12.78□□□□□ -0.36
TGFB2-201ENST00000366929 PRG4Q92954 1404 aaPredicted RBP12.77□□□□□ -0.36
TGFB2-201ENST00000366929 SYNJ1O43426 1573 aa12.77□□□□□ -0.37
TGFB2-201ENST00000366929 PPP1R15AO75807 674 aaPredicted RBP12.77□□□□□ -0.37
TGFB2-201ENST00000366929 CARMIL1Q5VZK9 1371 aa12.76□□□□□ -0.37
TGFB2-201ENST00000366929 CSRNP3Q8WYN3 585 aa12.76□□□□□ -0.37
TGFB2-201ENST00000366929 WIZO95785 1651 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms