RNA–Protein interactions for RNA: ENST00000366621.7

KCNK1-202, Transcript of potassium two pore domain channel subfamily K member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCNK1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNK1-202ENST00000366621 TROVE2P10155 538 aaKnown RBP eCLIP28.24■■■□□ 2.113e-23■■■■■ 149.7
KCNK1-202ENST00000366621 UTP3Q9NQZ2 479 aaKnown RBP eCLIP30.69■■■□□ 2.51e-6■■■■■ 46.6
KCNK1-202ENST00000366621 SF3B1O75533 1304 aaKnown RBP eCLIP29.45■■■□□ 2.36e-6■■■■■ 46
KCNK1-202ENST00000366621 PUM2Q8TB72 1066 aaKnown RBP eCLIP27.09■■□□□ 1.931e-9■■■■■ 43.3
KCNK1-202ENST00000366621 SF3B4Q15427 424 aaKnown RBP eCLIP24.47■■□□□ 1.516e-7■■■■■ 30.8
KCNK1-202ENST00000366621 DDX3XO00571 662 aaKnown RBP eCLIP30.55■■■□□ 2.484e-6■■■■■ 27.3
KCNK1-202ENST00000366621 TARDBPQ13148 414 aaKnown RBP eCLIP26.18■■□□□ 1.783e-7■■■■□ 23.3
KCNK1-202ENST00000366621 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.52■■■□□ 2.322e-6■■■■□ 19.7
KCNK1-202ENST00000366621 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP41.71■■■■■ 4.271e-11■■■□□ 19.1
KCNK1-202ENST00000366621 PTBP1P26599 531 aaKnown RBP eCLIP24.78■■□□□ 1.561e-9■■■□□ 16.5
KCNK1-202ENST00000366621 RBM15Q96T37 977 aaKnown RBP eCLIP29.25■■■□□ 2.272e-7■■■□□ 15.4
KCNK1-202ENST00000366621 FTOQ9C0B1 505 aaKnown RBP eCLIP32.87■■■□□ 2.855e-9■□□□□ 10.9
Retrieved 12 of 12 RNA–protein pairs in 4.3 ms