RNA–Protein interactions for RNA: ENST00000366578.5

ACTN2-201, Transcript of actinin alpha 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN2, Length 4,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN2-201ENST00000366578 NISCHQ9Y2I1 1504 aa22.21■■□□□ 1.15
ACTN2-201ENST00000366578 DCAF8L2P0C7V8 631 aa21.83■■□□□ 1.09
ACTN2-201ENST00000366578 SUPT5HO00267 1087 aaKnown RBP20.52■□□□□ 0.88
ACTN2-201ENST00000366578 SHROOM4Q9ULL8 1493 aa20.34■□□□□ 0.85
ACTN2-201ENST00000366578 FAM9AQ8IZU1 332 aaPredicted RBP19.65■□□□□ 0.74
ACTN2-201ENST00000366578 APLP2Q06481 763 aa19.59■□□□□ 0.73
ACTN2-201ENST00000366578 EHMT2Q96KQ7 1210 aa19.33■□□□□ 0.69
ACTN2-201ENST00000366578 TRIM41Q8WV44 630 aa19.28■□□□□ 0.68
ACTN2-201ENST00000366578 PCGF6Q9BYE7 350 aa19.13■□□□□ 0.65
ACTN2-201ENST00000366578 ABCC9O60706 1549 aa18.97■□□□□ 0.63
ACTN2-201ENST00000366578 UBTFP17480 764 aaKnown RBP18.95■□□□□ 0.62
ACTN2-201ENST00000366578 ZEB1P37275 1124 aaPredicted RBP18.78■□□□□ 0.6
ACTN2-201ENST00000366578 PELP1Q8IZL8 1130 aaKnown RBP18.78■□□□□ 0.6
ACTN2-201ENST00000366578 ATP1B4Q9UN42 357 aaPredicted RBP18.77■□□□□ 0.6
ACTN2-201ENST00000366578 RANGAP1P46060 587 aaPredicted RBP18.77■□□□□ 0.6
ACTN2-201ENST00000366578 TTBK1Q5TCY1 1321 aaPredicted RBP18.67■□□□□ 0.58
ACTN2-201ENST00000366578 CCDC180Q9P1Z9 1646 aa18.61■□□□□ 0.57
ACTN2-201ENST00000366578 PABPN1Q86U42 306 aaKnown RBP eCLIP18.56■□□□□ 0.56
ACTN2-201ENST00000366578 CCER1Q8TC90 406 aaPredicted RBP18.55■□□□□ 0.56
ACTN2-201ENST00000366578 CHIC1Q5VXU3 224 aa18.49■□□□□ 0.55
ACTN2-201ENST00000366578 HRCP23327 699 aa18.43■□□□□ 0.54
ACTN2-201ENST00000366578 ZCCHC6Q5VYS8 1495 aaKnown RBP18.42■□□□□ 0.54
ACTN2-201ENST00000366578 TRIM26Q12899 539 aaPredicted RBP18.34■□□□□ 0.53
ACTN2-201ENST00000366578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.33■□□□□ 0.52
ACTN2-201ENST00000366578 HNRNPUL2Q1KMD3 747 aaKnown RBP18.33■□□□□ 0.52
ACTN2-201ENST00000366578 PPARGC1BQ86YN6 1023 aaKnown RBP18.3■□□□□ 0.52
ACTN2-201ENST00000366578 CENPBP07199 599 aaPredicted RBP18.29■□□□□ 0.52
ACTN2-201ENST00000366578 LOC105371045A0A1W2PR82 267 aa18.28■□□□□ 0.52
ACTN2-201ENST00000366578 SCRIBQ14160 1630 aa18.2■□□□□ 0.5
ACTN2-201ENST00000366578 MYT1LQ9UL68 1186 aa18.16■□□□□ 0.5
ACTN2-201ENST00000366578 RB1CC1Q8TDY2 1594 aa18.15■□□□□ 0.5
ACTN2-201ENST00000366578 YTHDC1Q96MU7 727 aaKnown RBP18.12■□□□□ 0.49
ACTN2-201ENST00000366578 NACADO15069 1562 aa18.05■□□□□ 0.48
ACTN2-201ENST00000366578 ITGAEP38570 1179 aa18.02■□□□□ 0.48
ACTN2-201ENST00000366578 NEFLP07196 543 aa17.93■□□□□ 0.46
ACTN2-201ENST00000366578 CSRNP3Q8WYN3 585 aa17.92■□□□□ 0.46
ACTN2-201ENST00000366578 DCAF1Q9Y4B6 1507 aa17.86■□□□□ 0.45
ACTN2-201ENST00000366578 FBLN2P98095 1184 aa17.85■□□□□ 0.45
ACTN2-201ENST00000366578 FAM50AQ14320 339 aaKnown RBP17.82■□□□□ 0.44
ACTN2-201ENST00000366578 CDK11AQ9UQ88 783 aaPredicted RBP17.77■□□□□ 0.44
ACTN2-201ENST00000366578 ERICH6Q7L0X2 663 aa17.7■□□□□ 0.42
ACTN2-201ENST00000366578 TRIM52Q96A61 297 aa17.69■□□□□ 0.42
ACTN2-201ENST00000366578 POLR3GLQ9BT43 218 aa17.65■□□□□ 0.42
ACTN2-201ENST00000366578 MYT1Q01538 1121 aa17.64■□□□□ 0.41
ACTN2-201ENST00000366578 DIEXFQ68CQ4 756 aaKnown RBP17.61■□□□□ 0.41
ACTN2-201ENST00000366578 RSF1Q96T23 1441 aaPredicted RBP17.59■□□□□ 0.41
ACTN2-201ENST00000366578 BAZ1BQ9UIG0 1483 aaKnown RBP17.58■□□□□ 0.4
ACTN2-201ENST00000366578 EEA1Q15075 1411 aa17.57■□□□□ 0.4
ACTN2-201ENST00000366578 BAZ1AQ9NRL2 1556 aaPredicted RBP17.56■□□□□ 0.4
ACTN2-201ENST00000366578 NPM1P06748 294 aaKnown RBP eCLIP17.52■□□□□ 0.4
ACTN2-201ENST00000366578 P3H3Q8IVL6 736 aa17.52■□□□□ 0.39
ACTN2-201ENST00000366578 MYO15BQ96JP2 1530 aa17.48■□□□□ 0.39
ACTN2-201ENST00000366578 SLC4A1APQ9BWU0 796 aaKnown RBP17.45■□□□□ 0.38
ACTN2-201ENST00000366578 GTF3C3Q9Y5Q9 886 aa17.45■□□□□ 0.38
ACTN2-201ENST00000366578 CHMP7Q8WUX9 453 aaPredicted RBP17.41■□□□□ 0.38
ACTN2-201ENST00000366578 NEUROD1Q13562 356 aa17.41■□□□□ 0.38
ACTN2-201ENST00000366578 WRNQ14191 1432 aaPredicted RBP eCLIP17.38■□□□□ 0.37
ACTN2-201ENST00000366578 ZNF777Q9ULD5 760 aaPredicted RBP17.36■□□□□ 0.37
ACTN2-201ENST00000366578 ACIN1Q9UKV3 1341 aaKnown RBP17.34■□□□□ 0.37
ACTN2-201ENST00000366578 ESF1Q9H501 851 aaKnown RBP17.33■□□□□ 0.37
ACTN2-201ENST00000366578 KIF27Q86VH2 1401 aa17.33■□□□□ 0.36
ACTN2-201ENST00000366578 ARID3CA6NKF2 412 aa17.32■□□□□ 0.36
ACTN2-201ENST00000366578 GOLGA3Q08378 1498 aa17.3■□□□□ 0.36
ACTN2-201ENST00000366578 CLIP1P30622 1438 aa17.28■□□□□ 0.36
ACTN2-201ENST00000366578 ZNF326Q5BKZ1 582 aaKnown RBP17.28■□□□□ 0.36
ACTN2-201ENST00000366578 ANP32CO43423 234 aa17.27■□□□□ 0.36
ACTN2-201ENST00000366578 MTUS2Q5JR59 1369 aa17.27■□□□□ 0.36
ACTN2-201ENST00000366578 SMARCA2P51531 1590 aa17.26■□□□□ 0.35
ACTN2-201ENST00000366578 DAXXQ9UER7 740 aaPredicted RBP17.25■□□□□ 0.35
ACTN2-201ENST00000366578 CNGB1Q14028 1251 aaPredicted RBP17.24■□□□□ 0.35
ACTN2-201ENST00000366578 TSPY4P0CV99 314 aa17.23■□□□□ 0.35
ACTN2-201ENST00000366578 TSPY10P0CW01 314 aa17.23■□□□□ 0.35
ACTN2-201ENST00000366578 ERCC6Q03468 1493 aa17.22■□□□□ 0.35
ACTN2-201ENST00000366578 CEP164Q9UPV0 1460 aa17.21■□□□□ 0.35
ACTN2-201ENST00000366578 CECR2Q9BXF3 1484 aa17.19■□□□□ 0.34
ACTN2-201ENST00000366578 ZNF316A6NFI3 1004 aaPredicted RBP17.19■□□□□ 0.34
ACTN2-201ENST00000366578 TONSLQ96HA7 1378 aa17.17■□□□□ 0.34
ACTN2-201ENST00000366578 BCANQ96GW7 911 aa17.17■□□□□ 0.34
ACTN2-201ENST00000366578 NEFMP07197 916 aa17.15■□□□□ 0.34
ACTN2-201ENST00000366578 PLEKHD1A6NEE1 506 aa17.14■□□□□ 0.33
ACTN2-201ENST00000366578 TNIKQ9UKE5 1360 aa17.13■□□□□ 0.33
ACTN2-201ENST00000366578 STAG3Q9UJ98 1225 aa17.11■□□□□ 0.33
ACTN2-201ENST00000366578 PDS5BQ9NTI5 1447 aa17.11■□□□□ 0.33
ACTN2-201ENST00000366578 CEP162Q5TB80 1403 aa17.08■□□□□ 0.33
ACTN2-201ENST00000366578 MROH2BQ7Z745 1585 aa17.04■□□□□ 0.32
ACTN2-201ENST00000366578 SCAF1Q9H7N4 1312 aaKnown RBP17.03■□□□□ 0.32
ACTN2-201ENST00000366578 FHAD1B1AJZ9 1412 aa17.01■□□□□ 0.31
ACTN2-201ENST00000366578 CLSPNQ9HAW4 1339 aa17■□□□□ 0.31
ACTN2-201ENST00000366578 CHGAP10645 457 aaKnown RBP17■□□□□ 0.31
ACTN2-201ENST00000366578 CHIC2Q9UKJ5 165 aa16.98■□□□□ 0.31
ACTN2-201ENST00000366578 CCDC88BA6NC98 1476 aa16.98■□□□□ 0.31
ACTN2-201ENST00000366578 TOP2AP11388 1531 aaKnown RBP16.97■□□□□ 0.31
ACTN2-201ENST00000366578 CARMIL1Q5VZK9 1371 aa16.97■□□□□ 0.31
ACTN2-201ENST00000366578 CUX2O14529 1486 aa16.97■□□□□ 0.31
ACTN2-201ENST00000366578 ZBTB47Q9UFB7 747 aaPredicted RBP16.97■□□□□ 0.31
ACTN2-201ENST00000366578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.93■□□□□ 0.3
ACTN2-201ENST00000366578 CFDP1Q9UEE9 299 aaPredicted RBP16.92■□□□□ 0.3
ACTN2-201ENST00000366578 CADPSQ9ULU8 1353 aa16.9■□□□□ 0.3
ACTN2-201ENST00000366578 KCNH8Q96L42 1107 aa16.89■□□□□ 0.29
ACTN2-201ENST00000366578 ATAD2BQ9ULI0 1458 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms