RNA–Protein interactions for RNA: ENST00000366353.8

DPF3-201, Transcript of double PHD fingers 3, humanhuman

TSL 2

Gene DPF3, Length 3,687 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DPF3-201ENST00000366353 NISCHQ9Y2I1 1504 aa17.68■□□□□ 0.42
DPF3-201ENST00000366353 CCDC180Q9P1Z9 1646 aa15.33■□□□□ 0.04
DPF3-201ENST00000366353 ABCC9O60706 1549 aa14.94□□□□□ -0.02
DPF3-201ENST00000366353 DCAF8L2P0C7V8 631 aa14.94□□□□□ -0.02
DPF3-201ENST00000366353 ZCCHC6Q5VYS8 1495 aaKnown RBP14.8□□□□□ -0.04
DPF3-201ENST00000366353 SHROOM4Q9ULL8 1493 aa14.64□□□□□ -0.07
DPF3-201ENST00000366353 DCAF1Q9Y4B6 1507 aa14.44□□□□□ -0.1
DPF3-201ENST00000366353 NACADO15069 1562 aa14.34□□□□□ -0.11
DPF3-201ENST00000366353 SCRIBQ14160 1630 aa14.33□□□□□ -0.11
DPF3-201ENST00000366353 RB1CC1Q8TDY2 1594 aa14.28□□□□□ -0.12
DPF3-201ENST00000366353 MYO15BQ96JP2 1530 aa14.28□□□□□ -0.12
DPF3-201ENST00000366353 PABPN1Q86U42 306 aaKnown RBP eCLIP14.16□□□□□ -0.14
DPF3-201ENST00000366353 UNC13AQ9UPW8 1703 aa14.15□□□□□ -0.14
DPF3-201ENST00000366353 BICRAQ9NZM4 1560 aa13.99□□□□□ -0.17
DPF3-201ENST00000366353 SUPT5HO00267 1087 aaKnown RBP13.97□□□□□ -0.17
DPF3-201ENST00000366353 CECR2Q9BXF3 1484 aa13.91□□□□□ -0.18
DPF3-201ENST00000366353 MROH2BQ7Z745 1585 aa13.76□□□□□ -0.21
DPF3-201ENST00000366353 RSF1Q96T23 1441 aaPredicted RBP13.73□□□□□ -0.21
DPF3-201ENST00000366353 WIZO95785 1651 aa13.65□□□□□ -0.22
DPF3-201ENST00000366353 SMARCA4P51532 1647 aa13.62□□□□□ -0.23
DPF3-201ENST00000366353 BAZ1AQ9NRL2 1556 aaPredicted RBP13.6□□□□□ -0.23
DPF3-201ENST00000366353 EIF4G1Q04637 1599 aaKnown RBP13.55□□□□□ -0.24
DPF3-201ENST00000366353 DNAJC5BQ9UF47 199 aa13.46□□□□□ -0.26
DPF3-201ENST00000366353 ATAD2BQ9ULI0 1458 aa13.46□□□□□ -0.26
DPF3-201ENST00000366353 CC2D2AQ9P2K1 1620 aa13.42□□□□□ -0.26
DPF3-201ENST00000366353 PEG3Q9GZU2 1588 aa13.36□□□□□ -0.27
DPF3-201ENST00000366353 BAZ1BQ9UIG0 1483 aaKnown RBP13.35□□□□□ -0.27
DPF3-201ENST00000366353 TOP2AP11388 1531 aaKnown RBP13.35□□□□□ -0.27
DPF3-201ENST00000366353 SMARCA2P51531 1590 aa13.33□□□□□ -0.28
DPF3-201ENST00000366353 CCDC88BA6NC98 1476 aa13.32□□□□□ -0.28
DPF3-201ENST00000366353 NCAPD3P42695 1498 aa13.29□□□□□ -0.28
DPF3-201ENST00000366353 HMGXB3Q12766 1538 aa13.21□□□□□ -0.29
DPF3-201ENST00000366353 CHIC1Q5VXU3 224 aa13.19□□□□□ -0.3
DPF3-201ENST00000366353 NESP48681 1621 aa13.1□□□□□ -0.31
DPF3-201ENST00000366353 ABCC8Q09428 1581 aa13.1□□□□□ -0.31
DPF3-201ENST00000366353 TRIM41Q8WV44 630 aa13□□□□□ -0.33
DPF3-201ENST00000366353 CADPSQ9ULU8 1353 aa12.99□□□□□ -0.33
DPF3-201ENST00000366353 CFTRP13569 1480 aa12.99□□□□□ -0.33
DPF3-201ENST00000366353 FAM9AQ8IZU1 332 aaPredicted RBP12.96□□□□□ -0.34
DPF3-201ENST00000366353 EHMT2Q96KQ7 1210 aa12.93□□□□□ -0.34
DPF3-201ENST00000366353 SYNJ1O43426 1573 aa12.9□□□□□ -0.34
DPF3-201ENST00000366353 WRNQ14191 1432 aaPredicted RBP eCLIP12.89□□□□□ -0.35
DPF3-201ENST00000366353 PELP1Q8IZL8 1130 aaKnown RBP12.89□□□□□ -0.35
DPF3-201ENST00000366353 FANCD2Q9BXW9 1451 aa12.88□□□□□ -0.35
DPF3-201ENST00000366353 KIF21AQ7Z4S6 1674 aa12.85□□□□□ -0.35
DPF3-201ENST00000366353 CUX1P39880 1505 aa12.84□□□□□ -0.35
DPF3-201ENST00000366353 LOC105371045A0A1W2PR82 267 aa12.84□□□□□ -0.35
DPF3-201ENST00000366353 LAMC3Q9Y6N6 1575 aa12.83□□□□□ -0.36
DPF3-201ENST00000366353 PRDM2Q13029 1718 aa12.83□□□□□ -0.36
DPF3-201ENST00000366353 RUSC2Q8N2Y8 1516 aa12.83□□□□□ -0.36
DPF3-201ENST00000366353 SOGA1O94964 1423 aa12.81□□□□□ -0.36
DPF3-201ENST00000366353 MYT1Q01538 1121 aa12.78□□□□□ -0.36
DPF3-201ENST00000366353 CEP164Q9UPV0 1460 aa12.77□□□□□ -0.37
DPF3-201ENST00000366353 URB2Q14146 1524 aaKnown RBP12.77□□□□□ -0.37
DPF3-201ENST00000366353 PDS5BQ9NTI5 1447 aa12.76□□□□□ -0.37
DPF3-201ENST00000366353 TOP2BQ02880 1626 aa12.75□□□□□ -0.37
DPF3-201ENST00000366353 ERCC6Q03468 1493 aa12.72□□□□□ -0.37
DPF3-201ENST00000366353 RAD54L2Q9Y4B4 1467 aa12.72□□□□□ -0.37
DPF3-201ENST00000366353 TOPBP1Q92547 1522 aa12.72□□□□□ -0.37
DPF3-201ENST00000366353 BIVM-ERCC5R4GMW8 1640 aa12.72□□□□□ -0.37
DPF3-201ENST00000366353 FGD5Q6ZNL6 1462 aa12.71□□□□□ -0.37
DPF3-201ENST00000366353 POLA1P09884 1462 aaPredicted RBP12.67□□□□□ -0.38
DPF3-201ENST00000366353 DNMBPQ6XZF7 1577 aa12.66□□□□□ -0.38
DPF3-201ENST00000366353 MRC2Q9UBG0 1479 aa12.63□□□□□ -0.39
DPF3-201ENST00000366353 TDRD9Q8NDG6 1382 aaKnown RBP12.62□□□□□ -0.39
DPF3-201ENST00000366353 CUX2O14529 1486 aa12.61□□□□□ -0.39
DPF3-201ENST00000366353 THOC2Q8NI27 1593 aaKnown RBP12.6□□□□□ -0.39
DPF3-201ENST00000366353 CSRNP3Q8WYN3 585 aa12.6□□□□□ -0.39
DPF3-201ENST00000366353 ZNF608Q9ULD9 1512 aaPredicted RBP12.57□□□□□ -0.4
DPF3-201ENST00000366353 WDR62O43379 1518 aa12.56□□□□□ -0.4
DPF3-201ENST00000366353 RANGAP1P46060 587 aaPredicted RBP12.56□□□□□ -0.4
DPF3-201ENST00000366353 AQRO60306 1485 aaKnown RBP eCLIP12.55□□□□□ -0.4
DPF3-201ENST00000366353 TARBP1Q13395 1621 aaKnown RBP12.53□□□□□ -0.4
DPF3-201ENST00000366353 KIF27Q86VH2 1401 aa12.52□□□□□ -0.4
DPF3-201ENST00000366353 RAPGEF2Q9Y4G8 1499 aa12.51□□□□□ -0.41
DPF3-201ENST00000366353 IGF1RP08069 1367 aa12.51□□□□□ -0.41
DPF3-201ENST00000366353 ABCA10Q8WWZ4 1543 aa12.51□□□□□ -0.41
DPF3-201ENST00000366353 UBTFP17480 764 aaKnown RBP12.5□□□□□ -0.41
DPF3-201ENST00000366353 WDR97A6NE52 1622 aa12.49□□□□□ -0.41
DPF3-201ENST00000366353 GAPVD1Q14C86 1478 aa12.46□□□□□ -0.42
DPF3-201ENST00000366353 EEA1Q15075 1411 aa12.45□□□□□ -0.42
DPF3-201ENST00000366353 ABCA5Q8WWZ7 1642 aa12.44□□□□□ -0.42
DPF3-201ENST00000366353 PRXQ9BXM0 1461 aa12.43□□□□□ -0.42
DPF3-201ENST00000366353 CARMIL1Q5VZK9 1371 aa12.43□□□□□ -0.42
DPF3-201ENST00000366353 IFT140Q96RY7 1462 aa12.42□□□□□ -0.42
DPF3-201ENST00000366353 EIF4G3O43432 1585 aaKnown RBP12.41□□□□□ -0.42
DPF3-201ENST00000366353 TTBK1Q5TCY1 1321 aaPredicted RBP12.41□□□□□ -0.42
DPF3-201ENST00000366353 GOLGA3Q08378 1498 aa12.39□□□□□ -0.43
DPF3-201ENST00000366353 KIF21BO75037 1637 aa12.38□□□□□ -0.43
DPF3-201ENST00000366353 FBLN2P98095 1184 aa12.38□□□□□ -0.43
DPF3-201ENST00000366353 PBRM1Q86U86 1689 aa12.38□□□□□ -0.43
DPF3-201ENST00000366353 PPARGC1BQ86YN6 1023 aaKnown RBP12.36□□□□□ -0.43
DPF3-201ENST00000366353 SNAPC4Q5SXM2 1469 aa12.36□□□□□ -0.43
DPF3-201ENST00000366353 CEP162Q5TB80 1403 aa12.34□□□□□ -0.43
DPF3-201ENST00000366353 TNIKQ9UKE5 1360 aa12.33□□□□□ -0.43
DPF3-201ENST00000366353 GRIN2BQ13224 1484 aa12.33□□□□□ -0.44
DPF3-201ENST00000366353 P3H3Q8IVL6 736 aa12.32□□□□□ -0.44
DPF3-201ENST00000366353 ERICH3Q5RHP9 1530 aa12.32□□□□□ -0.44
DPF3-201ENST00000366353 ADAMTS12P58397 1594 aa12.29□□□□□ -0.44
DPF3-201ENST00000366353 CUL7Q14999 1698 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 515 ms