RNA–Protein interactions for RNA: ENST00000364640.1

RN7SKP217-201, Transcript of RNA, 7SK small nuclear pseudogene 217, humanhuman

BASIC

Gene RN7SKP217, Length 340 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP217-201ENST00000364640 AEBP2Q6ZN18 517 aaPredicted RBP25.63■■□□□ 1.69
RN7SKP217-201ENST00000364640 CHIC1Q5VXU3 224 aa25.03■■□□□ 1.6
RN7SKP217-201ENST00000364640 NISCHQ9Y2I1 1504 aa23■■□□□ 1.27
RN7SKP217-201ENST00000364640 PHF23Q9BUL5 403 aaPredicted RBP21.99■■□□□ 1.11
RN7SKP217-201ENST00000364640 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
RN7SKP217-201ENST00000364640 CCDC180Q9P1Z9 1646 aa20.41■□□□□ 0.86
RN7SKP217-201ENST00000364640 PLPPR3Q6T4P5 718 aa20.35■□□□□ 0.85
RN7SKP217-201ENST00000364640 FOXD1Q16676 465 aa20.22■□□□□ 0.83
RN7SKP217-201ENST00000364640 ABCC9O60706 1549 aa19.63■□□□□ 0.73
RN7SKP217-201ENST00000364640 ADRA2BP18089 450 aa19.44■□□□□ 0.7
RN7SKP217-201ENST00000364640 PPP6R1Q9UPN7 881 aa19.42■□□□□ 0.7
RN7SKP217-201ENST00000364640 ZCCHC6Q5VYS8 1495 aaKnown RBP19.24■□□□□ 0.67
RN7SKP217-201ENST00000364640 PIAS4Q8N2W9 510 aaPredicted RBP19.11■□□□□ 0.65
RN7SKP217-201ENST00000364640 MYO15BQ96JP2 1530 aa19.09■□□□□ 0.65
RN7SKP217-201ENST00000364640 DCAF1Q9Y4B6 1507 aa19.09■□□□□ 0.65
RN7SKP217-201ENST00000364640 NACADO15069 1562 aa19.06■□□□□ 0.64
RN7SKP217-201ENST00000364640 RB1CC1Q8TDY2 1594 aa19.02■□□□□ 0.64
RN7SKP217-201ENST00000364640 DCAF8L2P0C7V8 631 aa18.88■□□□□ 0.61
RN7SKP217-201ENST00000364640 UNC13AQ9UPW8 1703 aa18.69■□□□□ 0.58
RN7SKP217-201ENST00000364640 MSH5O43196 834 aa18.69■□□□□ 0.58
RN7SKP217-201ENST00000364640 SCRIBQ14160 1630 aa18.57■□□□□ 0.56
RN7SKP217-201ENST00000364640 BICRAQ9NZM4 1560 aa18.51■□□□□ 0.55
RN7SKP217-201ENST00000364640 SHROOM4Q9ULL8 1493 aa18.33■□□□□ 0.52
RN7SKP217-201ENST00000364640 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.52
RN7SKP217-201ENST00000364640 EIF4G1Q04637 1599 aaKnown RBP17.96■□□□□ 0.46
RN7SKP217-201ENST00000364640 PPP4R3CPQ6ZMV5 832 aa17.92■□□□□ 0.46
RN7SKP217-201ENST00000364640 CECR2Q9BXF3 1484 aa17.88■□□□□ 0.45
RN7SKP217-201ENST00000364640 SCAF1Q9H7N4 1312 aaKnown RBP17.84■□□□□ 0.45
RN7SKP217-201ENST00000364640 SMARCA4P51532 1647 aa17.82■□□□□ 0.44
RN7SKP217-201ENST00000364640 CC2D2AQ9P2K1 1620 aa17.82■□□□□ 0.44
RN7SKP217-201ENST00000364640 DNAJC5BQ9UF47 199 aa17.81■□□□□ 0.44
RN7SKP217-201ENST00000364640 BAZ1AQ9NRL2 1556 aaPredicted RBP17.8■□□□□ 0.44
RN7SKP217-201ENST00000364640 MROH2BQ7Z745 1585 aa17.73■□□□□ 0.43
RN7SKP217-201ENST00000364640 PEG3Q9GZU2 1588 aa17.68■□□□□ 0.42
RN7SKP217-201ENST00000364640 MAPK8IP2Q13387 824 aaPredicted RBP17.64■□□□□ 0.41
RN7SKP217-201ENST00000364640 ATAD2BQ9ULI0 1458 aa17.63■□□□□ 0.41
RN7SKP217-201ENST00000364640 SMARCA2P51531 1590 aa17.62■□□□□ 0.41
RN7SKP217-201ENST00000364640 NCAPD3P42695 1498 aa17.59■□□□□ 0.41
RN7SKP217-201ENST00000364640 RSF1Q96T23 1441 aaPredicted RBP17.59■□□□□ 0.41
RN7SKP217-201ENST00000364640 HMGXB3Q12766 1538 aa17.57■□□□□ 0.4
RN7SKP217-201ENST00000364640 WIZO95785 1651 aa17.55■□□□□ 0.4
RN7SKP217-201ENST00000364640 NCBP3Q53F19 620 aaKnown RBP17.49■□□□□ 0.39
RN7SKP217-201ENST00000364640 BAZ1BQ9UIG0 1483 aaKnown RBP17.47■□□□□ 0.39
RN7SKP217-201ENST00000364640 KCNA4P22459 653 aa17.45■□□□□ 0.38
RN7SKP217-201ENST00000364640 CNKSR2Q8WXI2 1034 aa17.43■□□□□ 0.38
RN7SKP217-201ENST00000364640 TOP2AP11388 1531 aaKnown RBP17.39■□□□□ 0.37
RN7SKP217-201ENST00000364640 DMRT2Q9Y5R5 561 aa17.37■□□□□ 0.37
RN7SKP217-201ENST00000364640 NPM3O75607 178 aaKnown RBP17.17■□□□□ 0.34
RN7SKP217-201ENST00000364640 SUPT5HO00267 1087 aaKnown RBP17.16■□□□□ 0.34
RN7SKP217-201ENST00000364640 CCDC88BA6NC98 1476 aa17.14■□□□□ 0.33
RN7SKP217-201ENST00000364640 LAMC3Q9Y6N6 1575 aa17.1■□□□□ 0.33
RN7SKP217-201ENST00000364640 NESP48681 1621 aa17.09■□□□□ 0.33
RN7SKP217-201ENST00000364640 RNF216Q9NWF9 866 aaPredicted RBP17.08■□□□□ 0.32
RN7SKP217-201ENST00000364640 POTEDQ86YR6 584 aa17.05■□□□□ 0.32
RN7SKP217-201ENST00000364640 CADPSQ9ULU8 1353 aa17.04■□□□□ 0.32
RN7SKP217-201ENST00000364640 CFTRP13569 1480 aa17.04■□□□□ 0.32
RN7SKP217-201ENST00000364640 PRDM2Q13029 1718 aa17.01■□□□□ 0.31
RN7SKP217-201ENST00000364640 HOXD11P31277 338 aaPredicted RBP17■□□□□ 0.31
RN7SKP217-201ENST00000364640 KIF21AQ7Z4S6 1674 aa16.94■□□□□ 0.3
RN7SKP217-201ENST00000364640 PDS5BQ9NTI5 1447 aa16.9■□□□□ 0.3
RN7SKP217-201ENST00000364640 ERCC6Q03468 1493 aa16.86■□□□□ 0.29
RN7SKP217-201ENST00000364640 FANCD2Q9BXW9 1451 aa16.86■□□□□ 0.29
RN7SKP217-201ENST00000364640 THOC2Q8NI27 1593 aaKnown RBP16.85■□□□□ 0.29
RN7SKP217-201ENST00000364640 CEP164Q9UPV0 1460 aa16.82■□□□□ 0.28
RN7SKP217-201ENST00000364640 MRC2Q9UBG0 1479 aa16.77■□□□□ 0.28
RN7SKP217-201ENST00000364640 WDR62O43379 1518 aa16.75■□□□□ 0.27
RN7SKP217-201ENST00000364640 DCAF8L1A6NGE4 600 aa16.74■□□□□ 0.27
RN7SKP217-201ENST00000364640 URB2Q14146 1524 aaKnown RBP16.72■□□□□ 0.27
RN7SKP217-201ENST00000364640 CUX2O14529 1486 aa16.68■□□□□ 0.26
RN7SKP217-201ENST00000364640 DNMBPQ6XZF7 1577 aa16.67■□□□□ 0.26
RN7SKP217-201ENST00000364640 SLC4A1APQ9BWU0 796 aaKnown RBP16.66■□□□□ 0.26
RN7SKP217-201ENST00000364640 TOPBP1Q92547 1522 aa16.65■□□□□ 0.26
RN7SKP217-201ENST00000364640 CUX1P39880 1505 aa16.62■□□□□ 0.25
RN7SKP217-201ENST00000364640 ABCC8Q09428 1581 aa16.62■□□□□ 0.25
RN7SKP217-201ENST00000364640 BIVM-ERCC5R4GMW8 1640 aa16.57■□□□□ 0.24
RN7SKP217-201ENST00000364640 SYNJ1O43426 1573 aa16.56■□□□□ 0.24
RN7SKP217-201ENST00000364640 TOP2BQ02880 1626 aa16.55■□□□□ 0.24
RN7SKP217-201ENST00000364640 WRNQ14191 1432 aaPredicted RBP eCLIP16.54■□□□□ 0.24
RN7SKP217-201ENST00000364640 POLA1P09884 1462 aaPredicted RBP16.53■□□□□ 0.24
RN7SKP217-201ENST00000364640 FGD5Q6ZNL6 1462 aa16.5■□□□□ 0.23
RN7SKP217-201ENST00000364640 TARBP1Q13395 1621 aaKnown RBP16.49■□□□□ 0.23
RN7SKP217-201ENST00000364640 IFT140Q96RY7 1462 aa16.47■□□□□ 0.23
RN7SKP217-201ENST00000364640 WDR97A6NE52 1622 aa16.46■□□□□ 0.23
RN7SKP217-201ENST00000364640 RAD54L2Q9Y4B4 1467 aa16.42■□□□□ 0.22
RN7SKP217-201ENST00000364640 SOGA1O94964 1423 aa16.39■□□□□ 0.21
RN7SKP217-201ENST00000364640 ZNF608Q9ULD9 1512 aaPredicted RBP16.39■□□□□ 0.21
RN7SKP217-201ENST00000364640 ABCA10Q8WWZ4 1543 aa16.38■□□□□ 0.21
RN7SKP217-201ENST00000364640 EIF4G3O43432 1585 aaKnown RBP16.37■□□□□ 0.21
RN7SKP217-201ENST00000364640 ABCA5Q8WWZ7 1642 aa16.34■□□□□ 0.21
RN7SKP217-201ENST00000364640 AQRO60306 1485 aaKnown RBP eCLIP16.29■□□□□ 0.2
RN7SKP217-201ENST00000364640 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.28■□□□□ 0.2
RN7SKP217-201ENST00000364640 TDRD9Q8NDG6 1382 aaKnown RBP16.26■□□□□ 0.19
RN7SKP217-201ENST00000364640 PBRM1Q86U86 1689 aa16.26■□□□□ 0.19
RN7SKP217-201ENST00000364640 GAPVD1Q14C86 1478 aa16.23■□□□□ 0.19
RN7SKP217-201ENST00000364640 GRIN2BQ13224 1484 aa16.21■□□□□ 0.19
RN7SKP217-201ENST00000364640 SLC4A2P04920 1241 aa16.2■□□□□ 0.18
RN7SKP217-201ENST00000364640 TRIM41Q8WV44 630 aa16.19■□□□□ 0.18
RN7SKP217-201ENST00000364640 ERICH3Q5RHP9 1530 aa16.18■□□□□ 0.18
RN7SKP217-201ENST00000364640 EHMT2Q96KQ7 1210 aa16.17■□□□□ 0.18
RN7SKP217-201ENST00000364640 SNAPC4Q5SXM2 1469 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms