RNA–Protein interactions for RNA: ENST00000362153.3

MIR339-201, microRNA 339, humanhuman

BASIC

Gene MIR339, Length 94 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR339-201ENST00000362153 NISCHQ9Y2I1 1504 aa31.69■■■□□ 2.66
MIR339-201ENST00000362153 CCDC180Q9P1Z9 1646 aa28.56■■■□□ 2.16
MIR339-201ENST00000362153 ABCC9O60706 1549 aa28.52■■■□□ 2.16
MIR339-201ENST00000362153 RB1CC1Q8TDY2 1594 aa27.23■■□□□ 1.95
MIR339-201ENST00000362153 NACADO15069 1562 aa27.01■■□□□ 1.91
MIR339-201ENST00000362153 DCAF8L2P0C7V8 631 aa26.91■■□□□ 1.9
MIR339-201ENST00000362153 MYO15BQ96JP2 1530 aa26.56■■□□□ 1.84
MIR339-201ENST00000362153 DNAJC5BQ9UF47 199 aa26.56■■□□□ 1.84
MIR339-201ENST00000362153 PABPN1Q86U42 306 aaKnown RBP eCLIP26.5■■□□□ 1.83
MIR339-201ENST00000362153 UNC13AQ9UPW8 1703 aa26.5■■□□□ 1.83
MIR339-201ENST00000362153 ZCCHC6Q5VYS8 1495 aaKnown RBP26.25■■□□□ 1.79
MIR339-201ENST00000362153 BICRAQ9NZM4 1560 aa26.23■■□□□ 1.79
MIR339-201ENST00000362153 DCAF1Q9Y4B6 1507 aa26.19■■□□□ 1.78
MIR339-201ENST00000362153 SHROOM4Q9ULL8 1493 aa26.09■■□□□ 1.77
MIR339-201ENST00000362153 SCRIBQ14160 1630 aa25.99■■□□□ 1.75
MIR339-201ENST00000362153 CC2D2AQ9P2K1 1620 aa25.77■■□□□ 1.72
MIR339-201ENST00000362153 CECR2Q9BXF3 1484 aa25.73■■□□□ 1.71
MIR339-201ENST00000362153 EIF4G1Q04637 1599 aaKnown RBP25.71■■□□□ 1.71
MIR339-201ENST00000362153 NCAPD3P42695 1498 aa24.83■■□□□ 1.57
MIR339-201ENST00000362153 SMARCA2P51531 1590 aa24.81■■□□□ 1.56
MIR339-201ENST00000362153 ERCC6Q03468 1493 aa24.78■■□□□ 1.56
MIR339-201ENST00000362153 SMARCA4P51532 1647 aa24.76■■□□□ 1.55
MIR339-201ENST00000362153 ATAD2BQ9ULI0 1458 aa24.76■■□□□ 1.55
MIR339-201ENST00000362153 HMGXB3Q12766 1538 aa24.72■■□□□ 1.55
MIR339-201ENST00000362153 BAZ1AQ9NRL2 1556 aaPredicted RBP24.7■■□□□ 1.54
MIR339-201ENST00000362153 CUX2O14529 1486 aa24.68■■□□□ 1.54
MIR339-201ENST00000362153 BAZ1BQ9UIG0 1483 aaKnown RBP24.62■■□□□ 1.53
MIR339-201ENST00000362153 DNAJC5Q9H3Z4 198 aa24.59■■□□□ 1.53
MIR339-201ENST00000362153 PEG3Q9GZU2 1588 aa24.49■■□□□ 1.51
MIR339-201ENST00000362153 NESP48681 1621 aa24.42■■□□□ 1.5
MIR339-201ENST00000362153 LAMC3Q9Y6N6 1575 aa24.39■■□□□ 1.5
MIR339-201ENST00000362153 MROH2BQ7Z745 1585 aa24.37■■□□□ 1.49
MIR339-201ENST00000362153 PDS5BQ9NTI5 1447 aa24.27■■□□□ 1.48
MIR339-201ENST00000362153 THOC2Q8NI27 1593 aaKnown RBP24.24■■□□□ 1.47
MIR339-201ENST00000362153 KIF21AQ7Z4S6 1674 aa24.19■■□□□ 1.46
MIR339-201ENST00000362153 CADPSQ9ULU8 1353 aa24.12■■□□□ 1.45
MIR339-201ENST00000362153 WIZO95785 1651 aa24.11■■□□□ 1.45
MIR339-201ENST00000362153 MRC2Q9UBG0 1479 aa24.02■■□□□ 1.44
MIR339-201ENST00000362153 CEP164Q9UPV0 1460 aa23.96■■□□□ 1.43
MIR339-201ENST00000362153 WDR62O43379 1518 aa23.93■■□□□ 1.42
MIR339-201ENST00000362153 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
MIR339-201ENST00000362153 TOP2AP11388 1531 aaKnown RBP23.86■■□□□ 1.41
MIR339-201ENST00000362153 RSF1Q96T23 1441 aaPredicted RBP23.85■■□□□ 1.41
MIR339-201ENST00000362153 CFTRP13569 1480 aa23.81■■□□□ 1.4
MIR339-201ENST00000362153 PRDM2Q13029 1718 aa23.7■■□□□ 1.39
MIR339-201ENST00000362153 TRIM41Q8WV44 630 aa23.62■■□□□ 1.37
MIR339-201ENST00000362153 URB2Q14146 1524 aaKnown RBP23.59■■□□□ 1.37
MIR339-201ENST00000362153 OSCARQ8IYS5 282 aa23.54■■□□□ 1.36
MIR339-201ENST00000362153 CCDC88BA6NC98 1476 aa23.52■■□□□ 1.36
MIR339-201ENST00000362153 ABCC8Q09428 1581 aa23.46■■□□□ 1.35
MIR339-201ENST00000362153 IFT140Q96RY7 1462 aa23.45■■□□□ 1.34
MIR339-201ENST00000362153 TOPBP1Q92547 1522 aa23.38■■□□□ 1.33
MIR339-201ENST00000362153 DNMBPQ6XZF7 1577 aa23.35■■□□□ 1.33
MIR339-201ENST00000362153 ZNF608Q9ULD9 1512 aaPredicted RBP23.29■■□□□ 1.32
MIR339-201ENST00000362153 EIF4G3O43432 1585 aaKnown RBP23.27■■□□□ 1.32
MIR339-201ENST00000362153 RIMBP3CA6NJZ7 1639 aa23.19■■□□□ 1.3
MIR339-201ENST00000362153 RIMBP3BA6NNM3 1639 aa23.19■■□□□ 1.3
MIR339-201ENST00000362153 RIMBP3Q9UFD9 1639 aa23.19■■□□□ 1.3
MIR339-201ENST00000362153 TARBP1Q13395 1621 aaKnown RBP23.14■■□□□ 1.29
MIR339-201ENST00000362153 POLA1P09884 1462 aaPredicted RBP23.13■■□□□ 1.29
MIR339-201ENST00000362153 FBLN2P98095 1184 aa23.13■■□□□ 1.29
MIR339-201ENST00000362153 ARHGEF11O15085 1522 aa23.12■■□□□ 1.29
MIR339-201ENST00000362153 AQRO60306 1485 aaKnown RBP eCLIP23.11■■□□□ 1.29
MIR339-201ENST00000362153 CHD1O14646 1710 aa23.11■■□□□ 1.29
MIR339-201ENST00000362153 SOGA1O94964 1423 aa23.07■■□□□ 1.28
MIR339-201ENST00000362153 WDR97A6NE52 1622 aa23.06■■□□□ 1.28
MIR339-201ENST00000362153 RAD54L2Q9Y4B4 1467 aa23.01■■□□□ 1.27
MIR339-201ENST00000362153 FGD5Q6ZNL6 1462 aa23■■□□□ 1.27
MIR339-201ENST00000362153 TDRD9Q8NDG6 1382 aaKnown RBP22.98■■□□□ 1.27
MIR339-201ENST00000362153 CYB5RLQ6IPT4 315 aa22.97■■□□□ 1.27
MIR339-201ENST00000362153 SNAPC4Q5SXM2 1469 aa22.94■■□□□ 1.26
MIR339-201ENST00000362153 CHMP7Q8WUX9 453 aaPredicted RBP22.93■■□□□ 1.26
MIR339-201ENST00000362153 CUX1P39880 1505 aa22.92■■□□□ 1.26
MIR339-201ENST00000362153 MAGI1Q96QZ7 1491 aaPredicted RBP22.92■■□□□ 1.26
MIR339-201ENST00000362153 SYNJ1O43426 1573 aa22.91■■□□□ 1.26
MIR339-201ENST00000362153 GRIN2BQ13224 1484 aa22.9■■□□□ 1.26
MIR339-201ENST00000362153 SUPT5HO00267 1087 aaKnown RBP22.89■■□□□ 1.25
MIR339-201ENST00000362153 TRHP20396 242 aaPredicted RBP22.84■■□□□ 1.25
MIR339-201ENST00000362153 ARAP1Q96P48 1450 aa22.83■■□□□ 1.25
MIR339-201ENST00000362153 PBRM1Q86U86 1689 aa22.83■■□□□ 1.24
MIR339-201ENST00000362153 SYNJ2O15056 1496 aa22.82■■□□□ 1.24
MIR339-201ENST00000362153 GAPVD1Q14C86 1478 aa22.8■■□□□ 1.24
MIR339-201ENST00000362153 CLASP1Q7Z460 1538 aa22.77■■□□□ 1.24
MIR339-201ENST00000362153 ABCA10Q8WWZ4 1543 aa22.74■■□□□ 1.23
MIR339-201ENST00000362153 WRNQ14191 1432 aaPredicted RBP eCLIP22.71■■□□□ 1.23
MIR339-201ENST00000362153 ABCA5Q8WWZ7 1642 aa22.71■■□□□ 1.23
MIR339-201ENST00000362153 TOP2BQ02880 1626 aa22.61■■□□□ 1.21
MIR339-201ENST00000362153 BIVM-ERCC5R4GMW8 1640 aa22.61■■□□□ 1.21
MIR339-201ENST00000362153 GRIN2AQ12879 1464 aa22.58■■□□□ 1.2
MIR339-201ENST00000362153 ADAMTS12P58397 1594 aa22.56■■□□□ 1.2
MIR339-201ENST00000362153 FHAD1B1AJZ9 1412 aa22.51■■□□□ 1.19
MIR339-201ENST00000362153 ERICH3Q5RHP9 1530 aa22.5■■□□□ 1.19
MIR339-201ENST00000362153 NUP160Q12769 1436 aa22.45■■□□□ 1.18
MIR339-201ENST00000362153 CEP170Q5SW79 1584 aa22.45■■□□□ 1.18
MIR339-201ENST00000362153 SHROOM2Q13796 1616 aa22.37■■□□□ 1.17
MIR339-201ENST00000362153 ERCC6L2Q5T890 1561 aa22.34■■□□□ 1.17
MIR339-201ENST00000362153 PRG4Q92954 1404 aaPredicted RBP22.3■■□□□ 1.16
MIR339-201ENST00000362153 AEBP2Q6ZN18 517 aaPredicted RBP22.29■■□□□ 1.16
MIR339-201ENST00000362153 JPH4Q96JJ6 628 aa22.26■■□□□ 1.15
MIR339-201ENST00000362153 NPM1P06748 294 aaKnown RBP eCLIP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms