RNA–Protein interactions for RNA: ENST00000360771.8

GYPA-202, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPA, Length 2,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-202ENST00000360771 SF3B1O75533 1304 aaKnown RBP eCLIP3.46□□□□□ -1.863e-6■■■■■ 137.9
GYPA-202ENST00000360771 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.06□□□□□ -1.766e-10■■■■■ 33.2
GYPA-202ENST00000360771 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.2□□□□□ -1.747e-7■■■■□ 26.5
GYPA-202ENST00000360771 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.09□□□□□ -1.758e-7■■■■□ 24.4
GYPA-202ENST00000360771 SND1Q7KZF4 910 aaKnown RBP eCLIP5.83□□□□□ -1.483e-7■■■■□ 23.9
GYPA-202ENST00000360771 SUB1P53999 127 aaKnown RBP eCLIP2.93□□□□□ -1.943e-12■■■■□ 23.4
GYPA-202ENST00000360771 RPS3P23396 243 aaKnown RBP eCLIP2.4□□□□□ -2.031e-7■■■■□ 21.7
GYPA-202ENST00000360771 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.88□□□□□ -1.635e-6■■■□□ 18.6
GYPA-202ENST00000360771 YBX3P16989 372 aaKnown RBP eCLIP4.58□□□□□ -1.684e-6■■■□□ 15.4
GYPA-202ENST00000360771 HNRNPLP14866 589 aaKnown RBP eCLIP4.39□□□□□ -1.713e-7■■□□□ 14.1
GYPA-202ENST00000360771 SF3B4Q15427 424 aaKnown RBP eCLIP3.33□□□□□ -1.881e-7■■□□□ 13.1
GYPA-202ENST00000360771 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.35□□□□□ -1.711e-38■■□□□ 12.4
GYPA-202ENST00000360771 TARDBPQ13148 414 aaKnown RBP eCLIP4.25□□□□□ -1.731e-6■■□□□ 12
GYPA-202ENST00000360771 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.33□□□□□ -1.722e-8■□□□□ 10.5
GYPA-202ENST00000360771 AQRO60306 1485 aaKnown RBP eCLIP5.56□□□□□ -1.521e-6■□□□□ 9.4
GYPA-202ENST00000360771 DDX6P26196 483 aaKnown RBP eCLIP3.55□□□□□ -1.843e-6■□□□□ 8.8
GYPA-202ENST00000360771 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.17□□□□□ -1.581e-6■□□□□ 8.2
GYPA-202ENST00000360771 KHSRPQ92945 711 aaKnown RBP eCLIP5.66□□□□□ -1.51e-7■□□□□ 8.2
GYPA-202ENST00000360771 PABPC4Q13310 644 aaKnown RBP eCLIP4.86□□□□□ -1.637e-8■□□□□ 8
Retrieved 19 of 19 RNA–protein pairs in 6.7 ms