RNA–Protein interactions for RNA: ENST00000359920.10

ARHGEF18-202, Transcript of Rho/Rac guanine nucleotide exchange factor 18, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ARHGEF18, Length 5,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF18-202ENST00000359920 PPIGQ13427 754 aaKnown RBP eCLIP18.26■□□□□ 0.513e-12■■■□□ 18.4
ARHGEF18-202ENST00000359920 KHSRPQ92945 711 aaKnown RBP eCLIP17.71■□□□□ 0.421e-9■■■□□ 17.9
ARHGEF18-202ENST00000359920 AQRO60306 1485 aaKnown RBP eCLIP21.69■■□□□ 1.066e-9■■■■■ 45.1
ARHGEF18-202ENST00000359920 HNRNPMP52272 730 aaKnown RBP eCLIP23.03■■□□□ 1.283e-8■■■□□ 18.2
ARHGEF18-202ENST00000359920 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.63■□□□□ 0.415e-8■■■■■ 33.8
ARHGEF18-202ENST00000359920 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.25■■□□□ 1.157e-8■■■■■ 186.3
ARHGEF18-202ENST00000359920 MATR3P43243 847 aaKnown RBP eCLIP21.91■■□□□ 1.12e-7■■■■■ 49.4
ARHGEF18-202ENST00000359920 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.14■□□□□ 0.812e-7■■■□□ 16.9
ARHGEF18-202ENST00000359920 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.1□□□□□ -0.153e-7■■■■■ 27.3
ARHGEF18-202ENST00000359920 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.08■■□□□ 1.295e-7■□□□□ 9.6
ARHGEF18-202ENST00000359920 UPF1Q92900 1129 aaKnown RBP eCLIP18.31■□□□□ 0.526e-7■■■■□ 23.5
ARHGEF18-202ENST00000359920 NONOQ15233 471 aaKnown RBP eCLIP20.87■□□□□ 0.931e-6■■■□□ 15.3
ARHGEF18-202ENST00000359920 AKAP1Q92667 903 aaKnown RBP eCLIP18.65■□□□□ 0.581e-6■■■■■ 28.3
ARHGEF18-202ENST00000359920 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.04■□□□□ 0.82e-6■■■■■ 54.9
ARHGEF18-202ENST00000359920 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.3■□□□□ 0.362e-6■■■■■ 49.9
ARHGEF18-202ENST00000359920 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.33■□□□□ 0.842e-6■■■■□ 23.9
ARHGEF18-202ENST00000359920 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.8■■□□□ 1.083e-6■■■□□ 18.6
ARHGEF18-202ENST00000359920 PTBP1P26599 531 aaKnown RBP eCLIP17.63■□□□□ 0.417e-6■□□□□ 8.1
ARHGEF18-202ENST00000359920 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.93■□□□□ 0.788e-6■■■□□ 14.7
Retrieved 19 of 19 RNA–protein pairs in 6.4 ms