RNA–Protein interactions for RNA: ENST00000359747.4

DSG4-202, Transcript of desmoglein 4, humanhuman

TSL 1 (best) BASIC

Gene DSG4, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG4-202ENST00000359747 NISCHQ9Y2I1 1504 aa21.51■■□□□ 1.03
DSG4-202ENST00000359747 DCAF8L2P0C7V8 631 aa18.5■□□□□ 0.55
DSG4-202ENST00000359747 CCDC180Q9P1Z9 1646 aa18.46■□□□□ 0.55
DSG4-202ENST00000359747 SHROOM4Q9ULL8 1493 aa18.29■□□□□ 0.52
DSG4-202ENST00000359747 SUPT5HO00267 1087 aaKnown RBP18.17■□□□□ 0.5
DSG4-202ENST00000359747 ZCCHC6Q5VYS8 1495 aaKnown RBP18.1■□□□□ 0.49
DSG4-202ENST00000359747 DCAF1Q9Y4B6 1507 aa17.78■□□□□ 0.44
DSG4-202ENST00000359747 MYO15BQ96JP2 1530 aa17.39■□□□□ 0.37
DSG4-202ENST00000359747 CHIC1Q5VXU3 224 aa17.33■□□□□ 0.36
DSG4-202ENST00000359747 NACADO15069 1562 aa17.29■□□□□ 0.36
DSG4-202ENST00000359747 ABCC9O60706 1549 aa17.22■□□□□ 0.35
DSG4-202ENST00000359747 TRIM41Q8WV44 630 aa17.18■□□□□ 0.34
DSG4-202ENST00000359747 SCRIBQ14160 1630 aa17.14■□□□□ 0.33
DSG4-202ENST00000359747 RB1CC1Q8TDY2 1594 aa17.1■□□□□ 0.33
DSG4-202ENST00000359747 ZEB1P37275 1124 aaPredicted RBP16.95■□□□□ 0.3
DSG4-202ENST00000359747 RSF1Q96T23 1441 aaPredicted RBP16.9■□□□□ 0.3
DSG4-202ENST00000359747 PCGF6Q9BYE7 350 aa16.86■□□□□ 0.29
DSG4-202ENST00000359747 TRIM26Q12899 539 aaPredicted RBP16.83■□□□□ 0.28
DSG4-202ENST00000359747 FAM9AQ8IZU1 332 aaPredicted RBP16.79■□□□□ 0.28
DSG4-202ENST00000359747 BAZ1AQ9NRL2 1556 aaPredicted RBP16.77■□□□□ 0.27
DSG4-202ENST00000359747 HRCP23327 699 aa16.75■□□□□ 0.27
DSG4-202ENST00000359747 PELP1Q8IZL8 1130 aaKnown RBP16.7■□□□□ 0.26
DSG4-202ENST00000359747 APLP2Q06481 763 aa16.68■□□□□ 0.26
DSG4-202ENST00000359747 LOC105371045A0A1W2PR82 267 aa16.63■□□□□ 0.25
DSG4-202ENST00000359747 EEA1Q15075 1411 aa16.53■□□□□ 0.24
DSG4-202ENST00000359747 EHMT2Q96KQ7 1210 aa16.53■□□□□ 0.24
DSG4-202ENST00000359747 UBTFP17480 764 aaKnown RBP16.52■□□□□ 0.24
DSG4-202ENST00000359747 MROH2BQ7Z745 1585 aa16.5■□□□□ 0.23
DSG4-202ENST00000359747 CECR2Q9BXF3 1484 aa16.49■□□□□ 0.23
DSG4-202ENST00000359747 TOP2AP11388 1531 aaKnown RBP16.46■□□□□ 0.22
DSG4-202ENST00000359747 PABPN1Q86U42 306 aaKnown RBP eCLIP16.45■□□□□ 0.22
DSG4-202ENST00000359747 MYT1Q01538 1121 aa16.4■□□□□ 0.22
DSG4-202ENST00000359747 SMARCA4P51532 1647 aa16.36■□□□□ 0.21
DSG4-202ENST00000359747 CCER1Q8TC90 406 aaPredicted RBP16.33■□□□□ 0.21
DSG4-202ENST00000359747 CSRNP3Q8WYN3 585 aa16.33■□□□□ 0.2
DSG4-202ENST00000359747 WIZO95785 1651 aa16.32■□□□□ 0.2
DSG4-202ENST00000359747 SMARCA2P51531 1590 aa16.32■□□□□ 0.2
DSG4-202ENST00000359747 BAZ1BQ9UIG0 1483 aaKnown RBP16.29■□□□□ 0.2
DSG4-202ENST00000359747 CCDC88BA6NC98 1476 aa16.23■□□□□ 0.19
DSG4-202ENST00000359747 WRNQ14191 1432 aaPredicted RBP eCLIP16.22■□□□□ 0.19
DSG4-202ENST00000359747 GOLGA3Q08378 1498 aa16.21■□□□□ 0.19
DSG4-202ENST00000359747 TNIKQ9UKE5 1360 aa16.18■□□□□ 0.18
DSG4-202ENST00000359747 CEP164Q9UPV0 1460 aa16.14■□□□□ 0.17
DSG4-202ENST00000359747 CENPBP07199 599 aaPredicted RBP16.08■□□□□ 0.17
DSG4-202ENST00000359747 CEP162Q5TB80 1403 aa16.07■□□□□ 0.16
DSG4-202ENST00000359747 ATAD2BQ9ULI0 1458 aa16.06■□□□□ 0.16
DSG4-202ENST00000359747 TTBK1Q5TCY1 1321 aaPredicted RBP16.04■□□□□ 0.16
DSG4-202ENST00000359747 ERICH6Q7L0X2 663 aa16.01■□□□□ 0.15
DSG4-202ENST00000359747 PPARGC1BQ86YN6 1023 aaKnown RBP15.99■□□□□ 0.15
DSG4-202ENST00000359747 PEG3Q9GZU2 1588 aa15.99■□□□□ 0.15
DSG4-202ENST00000359747 CLIP1P30622 1438 aa15.98■□□□□ 0.15
DSG4-202ENST00000359747 RANGAP1P46060 587 aaPredicted RBP15.96■□□□□ 0.15
DSG4-202ENST00000359747 ABCC8Q09428 1581 aa15.96■□□□□ 0.15
DSG4-202ENST00000359747 KIF27Q86VH2 1401 aa15.95■□□□□ 0.14
DSG4-202ENST00000359747 BICRAQ9NZM4 1560 aa15.9■□□□□ 0.14
DSG4-202ENST00000359747 UNC13AQ9UPW8 1703 aa15.88■□□□□ 0.13
DSG4-202ENST00000359747 SOGA1O94964 1423 aa15.88■□□□□ 0.13
DSG4-202ENST00000359747 NCAPD3P42695 1498 aa15.87■□□□□ 0.13
DSG4-202ENST00000359747 HMGXB3Q12766 1538 aa15.87■□□□□ 0.13
DSG4-202ENST00000359747 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.86■□□□□ 0.13
DSG4-202ENST00000359747 HNRNPUL2Q1KMD3 747 aaKnown RBP15.82■□□□□ 0.12
DSG4-202ENST00000359747 KIF21BO75037 1637 aa15.8■□□□□ 0.12
DSG4-202ENST00000359747 EIF4G1Q04637 1599 aaKnown RBP15.8■□□□□ 0.12
DSG4-202ENST00000359747 VPS8Q8N3P4 1428 aa15.8■□□□□ 0.12
DSG4-202ENST00000359747 ATP1B4Q9UN42 357 aaPredicted RBP15.78■□□□□ 0.12
DSG4-202ENST00000359747 DIEXFQ68CQ4 756 aaKnown RBP15.73■□□□□ 0.11
DSG4-202ENST00000359747 CLSPNQ9HAW4 1339 aa15.7■□□□□ 0.1
DSG4-202ENST00000359747 ZNF316A6NFI3 1004 aaPredicted RBP15.7■□□□□ 0.1
DSG4-202ENST00000359747 ERICH3Q5RHP9 1530 aa15.69■□□□□ 0.1
DSG4-202ENST00000359747 CADPSQ9ULU8 1353 aa15.69■□□□□ 0.1
DSG4-202ENST00000359747 TOP2BQ02880 1626 aa15.68■□□□□ 0.1
DSG4-202ENST00000359747 FHAD1B1AJZ9 1412 aa15.66■□□□□ 0.1
DSG4-202ENST00000359747 CFTRP13569 1480 aa15.63■□□□□ 0.09
DSG4-202ENST00000359747 SYNJ1O43426 1573 aa15.63■□□□□ 0.09
DSG4-202ENST00000359747 CUX2O14529 1486 aa15.62■□□□□ 0.09
DSG4-202ENST00000359747 ACIN1Q9UKV3 1341 aaKnown RBP15.62■□□□□ 0.09
DSG4-202ENST00000359747 CARMIL1Q5VZK9 1371 aa15.58■□□□□ 0.09
DSG4-202ENST00000359747 RAPGEF2Q9Y4G8 1499 aa15.57■□□□□ 0.08
DSG4-202ENST00000359747 RUSC2Q8N2Y8 1516 aa15.56■□□□□ 0.08
DSG4-202ENST00000359747 FAM50AQ14320 339 aaKnown RBP15.55■□□□□ 0.08
DSG4-202ENST00000359747 PDS5BQ9NTI5 1447 aa15.55■□□□□ 0.08
DSG4-202ENST00000359747 BIVM-ERCC5R4GMW8 1640 aa15.54■□□□□ 0.08
DSG4-202ENST00000359747 ITGAEP38570 1179 aa15.54■□□□□ 0.08
DSG4-202ENST00000359747 NEFLP07196 543 aa15.53■□□□□ 0.08
DSG4-202ENST00000359747 PRXQ9BXM0 1461 aa15.49■□□□□ 0.07
DSG4-202ENST00000359747 YTHDC1Q96MU7 727 aaKnown RBP15.48■□□□□ 0.07
DSG4-202ENST00000359747 FANCD2Q9BXW9 1451 aa15.47■□□□□ 0.07
DSG4-202ENST00000359747 CCNB3Q8WWL7 1395 aa15.46■□□□□ 0.06
DSG4-202ENST00000359747 CDK11AQ9UQ88 783 aaPredicted RBP15.45■□□□□ 0.06
DSG4-202ENST00000359747 FMN1Q68DA7 1419 aa15.43■□□□□ 0.06
DSG4-202ENST00000359747 CUX1P39880 1505 aa15.43■□□□□ 0.06
DSG4-202ENST00000359747 MTUS2Q5JR59 1369 aa15.41■□□□□ 0.06
DSG4-202ENST00000359747 FGD5Q6ZNL6 1462 aa15.41■□□□□ 0.06
DSG4-202ENST00000359747 TIMELESSQ9UNS1 1208 aa15.38■□□□□ 0.05
DSG4-202ENST00000359747 IGF1RP08069 1367 aa15.36■□□□□ 0.05
DSG4-202ENST00000359747 P3H3Q8IVL6 736 aa15.36■□□□□ 0.05
DSG4-202ENST00000359747 DNMBPQ6XZF7 1577 aa15.35■□□□□ 0.05
DSG4-202ENST00000359747 CC2D2AQ9P2K1 1620 aa15.35■□□□□ 0.05
DSG4-202ENST00000359747 EFCAB5A4FU69 1503 aa15.34■□□□□ 0.05
DSG4-202ENST00000359747 ARHGAP35Q9NRY4 1499 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms