RNA–Protein interactions for RNA: ENST00000359644.7

ATP2C1-202, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATP2C1, Length 3,401 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-202ENST00000359644 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.61□□□□□ -1.836e-6■■■■■ 93.2
ATP2C1-202ENST00000359644 SF3B1O75533 1304 aaKnown RBP eCLIP3.49□□□□□ -1.858e-7■■■■■ 85.6
ATP2C1-202ENST00000359644 FMR1Q06787 632 aaKnown RBP eCLIP4.36□□□□□ -1.712e-20■■■■■ 71.1
ATP2C1-202ENST00000359644 PTBP1P26599 531 aaKnown RBP eCLIP3.12□□□□□ -1.911e-16■■■■■ 67.2
ATP2C1-202ENST00000359644 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.3□□□□□ -1.882e-7■■■■■ 62.8
ATP2C1-202ENST00000359644 CSTF2P33240 577 aaKnown RBP eCLIP3.23□□□□□ -1.894e-21■■■■■ 61.4
ATP2C1-202ENST00000359644 AARSP49588 968 aaKnown RBP eCLIP3.81□□□□□ -1.81e-6■■■■■ 36.1
ATP2C1-202ENST00000359644 AQRO60306 1485 aaKnown RBP eCLIP6.24□□□□□ -1.412e-7■■■■■ 32.8
ATP2C1-202ENST00000359644 PCBP2Q15366 365 aaKnown RBP eCLIP3.22□□□□□ -1.892e-8■■■■■ 32.5
ATP2C1-202ENST00000359644 RBFOX2O43251 390 aaKnown RBP eCLIP2.86□□□□□ -1.952e-8■■■■■ 29.4
ATP2C1-202ENST00000359644 HNRNPMP52272 730 aaKnown RBP eCLIP5.26□□□□□ -1.575e-7■■■■■ 28.1
ATP2C1-202ENST00000359644 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.74□□□□□ -1.975e-7■■■■□ 22.1
ATP2C1-202ENST00000359644 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.88□□□□□ -1.794e-8■■■■□ 22
ATP2C1-202ENST00000359644 SF3B4Q15427 424 aaKnown RBP eCLIP3.42□□□□□ -1.868e-9■■■■□ 21.6
ATP2C1-202ENST00000359644 QKIQ96PU8 341 aaKnown RBP eCLIP3.38□□□□□ -1.873e-6■■■■□ 21.4
ATP2C1-202ENST00000359644 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.7□□□□□ -1.821e-6■■■■□ 20.6
ATP2C1-202ENST00000359644 TARDBPQ13148 414 aaKnown RBP eCLIP3.3□□□□□ -1.885e-6■■■■□ 20.6
ATP2C1-202ENST00000359644 HNRNPLP14866 589 aaKnown RBP eCLIP3.42□□□□□ -1.864e-6■■■■□ 19.8
ATP2C1-202ENST00000359644 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.25□□□□□ -1.897e-6■■■■□ 19.6
ATP2C1-202ENST00000359644 DDX3XO00571 662 aaKnown RBP eCLIP3.64□□□□□ -1.832e-8■■■■□ 19.4
ATP2C1-202ENST00000359644 PPIGQ13427 754 aaKnown RBP eCLIP3.83□□□□□ -1.81e-6■■■□□ 19.2
ATP2C1-202ENST00000359644 U2AF2P26368 475 aaKnown RBP eCLIP4.11□□□□□ -1.755e-6■■■□□ 19.2
ATP2C1-202ENST00000359644 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.73□□□□□ -1.813e-7■■■□□ 18.5
ATP2C1-202ENST00000359644 KHSRPQ92945 711 aaKnown RBP eCLIP3.93□□□□□ -1.782e-6■■■□□ 16.8
ATP2C1-202ENST00000359644 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.44□□□□□ -1.71e-6■■■□□ 15.2
ATP2C1-202ENST00000359644 SF3A3Q12874 501 aaKnown RBP eCLIP3.77□□□□□ -1.815e-6■■□□□ 14.3
ATP2C1-202ENST00000359644 GPKOWQ92917 476 aaPredicted RBP eCLIP3.7□□□□□ -1.825e-6■■□□□ 13.8
ATP2C1-202ENST00000359644 AGGF1Q8N302 714 aaeCLIP3.57□□□□□ -1.842e-9■□□□□ 10.7
ATP2C1-202ENST00000359644 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.93□□□□□ -1.781e-6■□□□□ 10.5
ATP2C1-202ENST00000359644 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.62□□□□□ -1.514e-8■□□□□ 8.6
Retrieved 30 of 30 RNA–protein pairs in 7 ms