RNA–Protein interactions for RNA: ENST00000359568.9

PCNT-201, Transcript of pericentrin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCNT, Length 10,560 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNT-201ENST00000359568 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.96□□□□□ -0.657e-63■■■■■ 217.5
PCNT-201ENST00000359568 GTF2F1P35269 517 aaKnown RBP eCLIP12.55□□□□□ -0.44e-16■■■■■ 118.6
PCNT-201ENST00000359568 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.75□□□□□ -0.691e-14■■■■■ 73.5
PCNT-201ENST00000359568 HNRNPKP61978 463 aaKnown RBP eCLIP9.9□□□□□ -0.837e-12■■■□□ 14.9
PCNT-201ENST00000359568 DKC1O60832 514 aaKnown RBP eCLIP11.45□□□□□ -0.584e-10■■■■■ 40.1
PCNT-201ENST00000359568 TIA1P31483 386 aaKnown RBP eCLIP10.04□□□□□ -0.84e-10■□□□□ 10.8
PCNT-201ENST00000359568 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.19□□□□□ -0.941e-9■■■■■ 32.8
PCNT-201ENST00000359568 CDC40O60508 579 aaKnown RBP eCLIP10.71□□□□□ -0.697e-9■■■■■ 48.5
PCNT-201ENST00000359568 TRA2AQ13595 282 aaKnown RBP eCLIP8.99□□□□□ -0.972e-8■■■■■ 31.3
PCNT-201ENST00000359568 KHSRPQ92945 711 aaKnown RBP eCLIP9.84□□□□□ -0.832e-8■■□□□ 13.1
PCNT-201ENST00000359568 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.15□□□□□ -0.783e-8■■■□□ 17.4
PCNT-201ENST00000359568 AGGF1Q8N302 714 aaeCLIP11.36□□□□□ -0.594e-8■■■■■ 79.6
PCNT-201ENST00000359568 HNRNPLP14866 589 aaKnown RBP eCLIP10.58□□□□□ -0.726e-8■■■■■ 57.8
PCNT-201ENST00000359568 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.28□□□□□ -0.769e-8■■■■□ 25.7
PCNT-201ENST00000359568 RBM22Q9NW64 420 aaKnown RBP eCLIP10.51□□□□□ -0.731e-7■■■■■ 41.1
PCNT-201ENST00000359568 EIF4G2P78344 907 aaKnown RBP eCLIP13.62□□□□□ -0.231e-7■■■■■ 71.3
PCNT-201ENST00000359568 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.86□□□□□ -0.832e-7■■■■□ 26.6
PCNT-201ENST00000359568 SF3B4Q15427 424 aaKnown RBP eCLIP10.09□□□□□ -0.792e-7■■■■■ 52.3
PCNT-201ENST00000359568 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.04□□□□□ -0.482e-7■■■■□ 25.8
PCNT-201ENST00000359568 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.22□□□□□ -0.772e-7■■■■□ 24.4
PCNT-201ENST00000359568 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.07□□□□□ -0.83e-7■□□□□ 11.2
PCNT-201ENST00000359568 AQRO60306 1485 aaKnown RBP eCLIP11.81□□□□□ -0.523e-7■■■■■ 83.1
PCNT-201ENST00000359568 TARDBPQ13148 414 aaKnown RBP eCLIP10.33□□□□□ -0.763e-7■■■■□ 26.1
PCNT-201ENST00000359568 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.91□□□□□ -0.664e-7■■■□□ 18.4
PCNT-201ENST00000359568 PUM1Q14671 1186 aaKnown RBP eCLIP10.17□□□□□ -0.784e-7■■□□□ 12.1
PCNT-201ENST00000359568 ZNF622Q969S3 477 aaKnown RBP eCLIP12.24□□□□□ -0.455e-7■■■□□ 15.9
PCNT-201ENST00000359568 U2AF1Q01081 240 aaKnown RBP eCLIP12.87□□□□□ -0.356e-7■■■■■ 27.8
PCNT-201ENST00000359568 PPIGQ13427 754 aaKnown RBP eCLIP10.12□□□□□ -0.796e-7■■■□□ 16.5
PCNT-201ENST00000359568 EIF3HO15372 352 aaKnown RBP eCLIP11.44□□□□□ -0.588e-7■■■□□ 14.8
PCNT-201ENST00000359568 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.15□□□□□ -0.478e-7■■■□□ 17.1
PCNT-201ENST00000359568 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.93□□□□□ -0.59e-7■■□□□ 13.7
PCNT-201ENST00000359568 TROVE2P10155 538 aaKnown RBP eCLIP11.69□□□□□ -0.541e-6■■□□□ 12.5
PCNT-201ENST00000359568 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.36□□□□□ -0.431e-6■■■■■ 110.6
PCNT-201ENST00000359568 PCBP2Q15366 365 aaKnown RBP eCLIP10.05□□□□□ -0.81e-6■■■■□ 23.6
PCNT-201ENST00000359568 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.29□□□□□ -0.281e-6■■■■□ 19.5
PCNT-201ENST00000359568 FMR1Q06787 632 aaKnown RBP eCLIP11.09□□□□□ -0.631e-6■■□□□ 12
PCNT-201ENST00000359568 LARP4Q71RC2 724 aaKnown RBP eCLIP9.93□□□□□ -0.821e-6■■■■□ 24.9
PCNT-201ENST00000359568 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.67□□□□□ -0.71e-6■■■□□ 14.8
PCNT-201ENST00000359568 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.67□□□□□ -0.71e-6■■■■□ 26.1
PCNT-201ENST00000359568 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.19□□□□□ -0.781e-6■■■■□ 23.6
PCNT-201ENST00000359568 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.3□□□□□ -0.61e-6■■□□□ 14.4
PCNT-201ENST00000359568 U2AF2P26368 475 aaKnown RBP eCLIP12.12□□□□□ -0.472e-6■■■■□ 26.2
PCNT-201ENST00000359568 NONOQ15233 471 aaKnown RBP eCLIP11.39□□□□□ -0.592e-6■■■■□ 20.5
PCNT-201ENST00000359568 RBM15Q96T37 977 aaKnown RBP eCLIP11.14□□□□□ -0.632e-6■■■■□ 20.1
PCNT-201ENST00000359568 SF3A3Q12874 501 aaKnown RBP eCLIP11.74□□□□□ -0.532e-6■■■■□ 25.3
PCNT-201ENST00000359568 HNRNPMP52272 730 aaKnown RBP eCLIP12.21□□□□□ -0.452e-6■■■■□ 23
PCNT-201ENST00000359568 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.97□□□□□ -0.492e-6■■□□□ 12.1
PCNT-201ENST00000359568 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.38□□□□□ -0.752e-6■■□□□ 11.7
PCNT-201ENST00000359568 FXR2P51116 673 aaKnown RBP eCLIP10.75□□□□□ -0.693e-6■■■■□ 23.7
PCNT-201ENST00000359568 PTBP1P26599 531 aaKnown RBP eCLIP9.96□□□□□ -0.823e-6■■■■■ 30.2
PCNT-201ENST00000359568 GPKOWQ92917 476 aaPredicted RBP eCLIP11.3□□□□□ -0.63e-6■■□□□ 13.5
PCNT-201ENST00000359568 EFTUD2Q15029 972 aaKnown RBP eCLIP11.22□□□□□ -0.613e-6■■■■■ 41.9
PCNT-201ENST00000359568 PABPC4Q13310 644 aaKnown RBP eCLIP11.17□□□□□ -0.623e-6■■■□□ 15.2
PCNT-201ENST00000359568 XRCC6P12956 609 aaKnown RBP eCLIP12.41□□□□□ -0.423e-6■■■□□ 18.2
PCNT-201ENST00000359568 AATFQ9NY61 560 aaKnown RBP eCLIP11.45□□□□□ -0.583e-6■■■■□ 23.5
PCNT-201ENST00000359568 NIPBLQ6KC79 2804 aaeCLIP6.87□□□□□ -1.313e-6■□□□□ 8
PCNT-201ENST00000359568 WDR43Q15061 677 aaKnown RBP eCLIP13.75□□□□□ -0.213e-6■■■■□ 20.8
PCNT-201ENST00000359568 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.74□□□□□ -0.694e-6■■□□□ 13
PCNT-201ENST00000359568 SF3B1O75533 1304 aaKnown RBP eCLIP10.83□□□□□ -0.686e-6■■■■■ 90.9
PCNT-201ENST00000359568 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.96□□□□□ -0.658e-6■□□□□ 10.1
PCNT-201ENST00000359568 DDX3XO00571 662 aaKnown RBP eCLIP10.87□□□□□ -0.678e-6■■■□□ 14.7
Retrieved 61 of 61 RNA–protein pairs in 88.8 ms