RNA–Protein interactions for RNA: ENST00000357310.5

APAF1-202, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene APAF1, Length 7,055 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-202ENST00000357310 NSUN2Q08J23 767 aaKnown RBP eCLIP14.64□□□□□ -0.071e-91■■■■■ 317.4
APAF1-202ENST00000357310 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.76□□□□□ -0.375e-15■■■■■ 55
APAF1-202ENST00000357310 PTBP1P26599 531 aaKnown RBP eCLIP11.65□□□□□ -0.546e-13■■■□□ 17
APAF1-202ENST00000357310 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.32■□□□□ 0.522e-12■■■■■ 39
APAF1-202ENST00000357310 SF3B4Q15427 424 aaKnown RBP eCLIP12.33□□□□□ -0.444e-12■■■■■ 53.5
APAF1-202ENST00000357310 DDX3XO00571 662 aaKnown RBP eCLIP13.76□□□□□ -0.212e-11■■■□□ 17.2
APAF1-202ENST00000357310 PCBP2Q15366 365 aaKnown RBP eCLIP13.49□□□□□ -0.258e-10■■■■■ 41.4
APAF1-202ENST00000357310 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.62■□□□□ 0.255e-9■■■■■ 167.7
APAF1-202ENST00000357310 LSM11P83369 360 aaKnown RBP eCLIP11.97□□□□□ -0.491e-8■■■■■ 91.9
APAF1-202ENST00000357310 U2AF2P26368 475 aaKnown RBP eCLIP14.79□□□□□ -0.048e-8■■□□□ 12.3
APAF1-202ENST00000357310 KHSRPQ92945 711 aaKnown RBP eCLIP12.2□□□□□ -0.469e-8■■■□□ 18.1
APAF1-202ENST00000357310 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.88□□□□□ -0.351e-7■■■□□ 17
APAF1-202ENST00000357310 UPF1Q92900 1129 aaKnown RBP eCLIP13.13□□□□□ -0.311e-6■■■■■ 31
APAF1-202ENST00000357310 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.9□□□□□ -0.021e-6■□□□□ 11
APAF1-202ENST00000357310 ZNF622Q969S3 477 aaKnown RBP eCLIP15.71■□□□□ 0.111e-6■□□□□ 10.5
APAF1-202ENST00000357310 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.36□□□□□ -0.272e-6■■■■□ 20.2
APAF1-202ENST00000357310 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.69■□□□□ 0.12e-6■■■■□ 25.5
APAF1-202ENST00000357310 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.06□□□□□ -0.642e-6■■■■□ 24
APAF1-202ENST00000357310 SF3B1O75533 1304 aaKnown RBP eCLIP13.31□□□□□ -0.282e-6■■■■■ 98
APAF1-202ENST00000357310 QKIQ96PU8 341 aaKnown RBP eCLIP13.49□□□□□ -0.252e-6■■■■□ 23
APAF1-202ENST00000357310 PUM1Q14671 1186 aaKnown RBP eCLIP13.29□□□□□ -0.282e-6■■□□□ 14.5
APAF1-202ENST00000357310 RPS3P23396 243 aaKnown RBP eCLIP12.72□□□□□ -0.373e-6■□□□□ 10.1
APAF1-202ENST00000357310 ZRANB2O95218 330 aaKnown RBP eCLIP14.34□□□□□ -0.114e-6■■■■□ 26.2
APAF1-202ENST00000357310 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.86■□□□□ 0.297e-6■■■■□ 19.6
APAF1-202ENST00000357310 PCBP1Q15365 356 aaKnown RBP eCLIP12.71□□□□□ -0.379e-6■■□□□ 13.3
APAF1-202ENST00000357310 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.04□□□□□ -0.169e-6■■■■■ 27.7
APAF1-202ENST00000357310 TIA1P31483 386 aaKnown RBP eCLIP12.53□□□□□ -0.49e-6■■■■□ 19.7
Retrieved 27 of 27 RNA–protein pairs in 29.7 ms