RNA–Protein interactions for RNA: ENST00000356872.7

PCED1A-201, Transcript of PC-esterase domain containing 1A, humanhuman

TSL 2 BASIC

Gene PCED1A, Length 1,706 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCED1A-201ENST00000356872 AQRO60306 1485 aaKnown RBP eCLIP30.71■■■□□ 2.512e-12■■■■■ 107.2
PCED1A-201ENST00000356872 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.73■□□□□ 0.431e-6■■■■■ 46.4
PCED1A-201ENST00000356872 PCBP2Q15366 365 aaKnown RBP eCLIP17.99■□□□□ 0.475e-9■■■■■ 33
PCED1A-201ENST00000356872 PCBP1Q15365 356 aaKnown RBP eCLIP20.46■□□□□ 0.878e-12■■■■■ 28.2
PCED1A-201ENST00000356872 NONOQ15233 471 aaKnown RBP eCLIP21.19■□□□□ 0.982e-7■■■■□ 25.4
PCED1A-201ENST00000356872 PPIGQ13427 754 aaKnown RBP eCLIP20.2■□□□□ 0.822e-10■■■■□ 23.8
PCED1A-201ENST00000356872 LSM11P83369 360 aaKnown RBP eCLIP16.62■□□□□ 0.253e-8■■■■□ 19.8
PCED1A-201ENST00000356872 SF3A3Q12874 501 aaKnown RBP eCLIP17.52■□□□□ 0.42e-10■■■□□ 18.6
PCED1A-201ENST00000356872 PABPN1Q86U42 306 aaKnown RBP eCLIP34.65■■■■□ 3.149e-7■■■□□ 17.5
PCED1A-201ENST00000356872 EFTUD2Q15029 972 aaKnown RBP eCLIP18.32■□□□□ 0.526e-7■■■□□ 17.5
PCED1A-201ENST00000356872 SF3B4Q15427 424 aaKnown RBP eCLIP16.72■□□□□ 0.271e-9■■■□□ 17.5
PCED1A-201ENST00000356872 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.77■■□□□ 1.082e-8■■■□□ 17.2
PCED1A-201ENST00000356872 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.26■□□□□ 0.036e-12■■■□□ 16.3
PCED1A-201ENST00000356872 CDC40O60508 579 aaKnown RBP eCLIP16.88■□□□□ 0.293e-11■■■□□ 16.2
PCED1A-201ENST00000356872 PRPF4O43172 522 aaKnown RBP eCLIP18.13■□□□□ 0.493e-8■■■□□ 16.1
PCED1A-201ENST00000356872 EIF3HO15372 352 aaKnown RBP eCLIP18.68■□□□□ 0.583e-6■■■□□ 16
PCED1A-201ENST00000356872 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.02■□□□□ 0.83e-15■■■□□ 14.7
PCED1A-201ENST00000356872 SMNDC1O75940 238 aaKnown RBP eCLIP16.36■□□□□ 0.212e-8■■■□□ 14.6
PCED1A-201ENST00000356872 TAF15Q92804 592 aaKnown RBP eCLIP14.53□□□□□ -0.082e-6■■□□□ 14.2
PCED1A-201ENST00000356872 DDX6P26196 483 aaKnown RBP eCLIP19.41■□□□□ 0.75e-6■■□□□ 14.2
PCED1A-201ENST00000356872 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.97■□□□□ 0.795e-7■■□□□ 14.2
PCED1A-201ENST00000356872 SRSF1Q07955 248 aaKnown RBP eCLIP16.13■□□□□ 0.175e-7■■□□□ 14
PCED1A-201ENST00000356872 GTF2F1P35269 517 aaKnown RBP eCLIP19.38■□□□□ 0.691e-6■■□□□ 13.9
PCED1A-201ENST00000356872 AARSP49588 968 aaKnown RBP eCLIP19.89■□□□□ 0.772e-7■■□□□ 13.7
PCED1A-201ENST00000356872 HNRNPKP61978 463 aaKnown RBP eCLIP18.23■□□□□ 0.513e-14■■□□□ 13.7
PCED1A-201ENST00000356872 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.2■□□□□ 0.343e-16■■□□□ 13.4
PCED1A-201ENST00000356872 RBM15Q96T37 977 aaKnown RBP eCLIP18.74■□□□□ 0.592e-6■■□□□ 13.1
PCED1A-201ENST00000356872 SRSF9Q13242 221 aaKnown RBP eCLIP11.87□□□□□ -0.516e-7■■□□□ 13
PCED1A-201ENST00000356872 RBM5P52756 815 aaKnown RBP eCLIP22.23■■□□□ 1.153e-12■■□□□ 12.9
PCED1A-201ENST00000356872 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.35■□□□□ 0.372e-13■■□□□ 12.9
PCED1A-201ENST00000356872 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.63■□□□□ 0.573e-7■■□□□ 12
PCED1A-201ENST00000356872 RBFOX2O43251 390 aaKnown RBP eCLIP14.99□□□□□ -0.014e-10■■□□□ 11.8
PCED1A-201ENST00000356872 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.35■■□□□ 1.974e-10■□□□□ 10.6
PCED1A-201ENST00000356872 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.75■□□□□ 0.595e-6■□□□□ 10.4
PCED1A-201ENST00000356872 U2AF1Q01081 240 aaKnown RBP eCLIP24.67■■□□□ 1.549e-7■□□□□ 10.3
PCED1A-201ENST00000356872 NCBP2P52298 156 aaKnown RBP eCLIP17.38■□□□□ 0.376e-8■□□□□ 10.1
PCED1A-201ENST00000356872 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.49■■□□□ 1.192e-9■□□□□ 10.1
PCED1A-201ENST00000356872 ZC3H11AO75152 810 aaKnown RBP eCLIP20.02■□□□□ 0.793e-7■□□□□ 10
PCED1A-201ENST00000356872 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.74■□□□□ 0.911e-16■□□□□ 9
PCED1A-201ENST00000356872 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.31■□□□□ 0.689e-14■□□□□ 8.9
PCED1A-201ENST00000356872 DDX3XO00571 662 aaKnown RBP eCLIP19.59■□□□□ 0.735e-8■□□□□ 8.8
PCED1A-201ENST00000356872 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.14■□□□□ 0.816e-7■□□□□ 8.8
PCED1A-201ENST00000356872 EIF3DO15371 548 aaKnown RBP eCLIP20.46■□□□□ 0.875e-6■□□□□ 8.8
PCED1A-201ENST00000356872 U2AF2P26368 475 aaKnown RBP eCLIP21.24■□□□□ 0.995e-6■□□□□ 8.6
PCED1A-201ENST00000356872 RBM22Q9NW64 420 aaKnown RBP eCLIP18.87■□□□□ 0.612e-25■□□□□ 8.4
PCED1A-201ENST00000356872 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.35■■■□□ 2.134e-6■□□□□ 8.2
Retrieved 46 of 46 RNA–protein pairs in 11.2 ms