RNA–Protein interactions for RNA: ENST00000356770.8

PBRM1-203, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 7,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-203ENST00000356770 DCAF8L2P0C7V8 631 aa14.06□□□□□ -0.16
PBRM1-203ENST00000356770 PELP1Q8IZL8 1130 aaKnown RBP13.53□□□□□ -0.24
PBRM1-203ENST00000356770 EHMT2Q96KQ7 1210 aa13.15□□□□□ -0.3
PBRM1-203ENST00000356770 ERICH6Q7L0X2 663 aa13.11□□□□□ -0.31
PBRM1-203ENST00000356770 SUPT5HO00267 1087 aaKnown RBP13.02□□□□□ -0.32
PBRM1-203ENST00000356770 FAM9AQ8IZU1 332 aaPredicted RBP12.98□□□□□ -0.33
PBRM1-203ENST00000356770 APLP2Q06481 763 aa12.97□□□□□ -0.33
PBRM1-203ENST00000356770 CCER1Q8TC90 406 aaPredicted RBP12.94□□□□□ -0.34
PBRM1-203ENST00000356770 TTBK1Q5TCY1 1321 aaPredicted RBP12.71□□□□□ -0.37
PBRM1-203ENST00000356770 MYT1Q01538 1121 aa12.67□□□□□ -0.38
PBRM1-203ENST00000356770 ATP1B4Q9UN42 357 aaPredicted RBP12.6□□□□□ -0.39
PBRM1-203ENST00000356770 SHROOM4Q9ULL8 1493 aa12.6□□□□□ -0.39
PBRM1-203ENST00000356770 CENPBP07199 599 aaPredicted RBP12.56□□□□□ -0.4
PBRM1-203ENST00000356770 RANGAP1P46060 587 aaPredicted RBP12.54□□□□□ -0.4
PBRM1-203ENST00000356770 NEFLP07196 543 aa12.54□□□□□ -0.4
PBRM1-203ENST00000356770 PCGF6Q9BYE7 350 aa12.51□□□□□ -0.41
PBRM1-203ENST00000356770 DAXXQ9UER7 740 aaPredicted RBP12.5□□□□□ -0.41
PBRM1-203ENST00000356770 MYT1LQ9UL68 1186 aa12.33□□□□□ -0.44
PBRM1-203ENST00000356770 YTHDC1Q96MU7 727 aaKnown RBP12.33□□□□□ -0.44
PBRM1-203ENST00000356770 POLR3GLQ9BT43 218 aa12.24□□□□□ -0.45
PBRM1-203ENST00000356770 CHIC1Q5VXU3 224 aa12.21□□□□□ -0.46
PBRM1-203ENST00000356770 ZEB1P37275 1124 aaPredicted RBP12.2□□□□□ -0.46
PBRM1-203ENST00000356770 SLC4A1APQ9BWU0 796 aaKnown RBP12.19□□□□□ -0.46
PBRM1-203ENST00000356770 ZNF316A6NFI3 1004 aaPredicted RBP12.14□□□□□ -0.47
PBRM1-203ENST00000356770 UBTFP17480 764 aaKnown RBP12.13□□□□□ -0.47
PBRM1-203ENST00000356770 CNGB1Q14028 1251 aaPredicted RBP12.12□□□□□ -0.47
PBRM1-203ENST00000356770 CLSPNQ9HAW4 1339 aa12.1□□□□□ -0.47
PBRM1-203ENST00000356770 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.04□□□□□ -0.48
PBRM1-203ENST00000356770 HNRNPUL2Q1KMD3 747 aaKnown RBP12.04□□□□□ -0.48
PBRM1-203ENST00000356770 RTL5Q5HYW3 569 aaPredicted RBP12.01□□□□□ -0.49
PBRM1-203ENST00000356770 TRIM41Q8WV44 630 aa12□□□□□ -0.49
PBRM1-203ENST00000356770 NISCHQ9Y2I1 1504 aa11.97□□□□□ -0.49
PBRM1-203ENST00000356770 ITGAEP38570 1179 aa11.94□□□□□ -0.5
PBRM1-203ENST00000356770 SLC24A1O60721 1099 aa11.92□□□□□ -0.5
PBRM1-203ENST00000356770 PPARGC1BQ86YN6 1023 aaKnown RBP11.9□□□□□ -0.5
PBRM1-203ENST00000356770 ZBTB47Q9UFB7 747 aaPredicted RBP11.89□□□□□ -0.51
PBRM1-203ENST00000356770 BCL11AQ9H165 835 aa11.85□□□□□ -0.51
PBRM1-203ENST00000356770 BCANQ96GW7 911 aa11.67□□□□□ -0.54
PBRM1-203ENST00000356770 CANXP27824 592 aaKnown RBP11.66□□□□□ -0.54
PBRM1-203ENST00000356770 NEFMP07197 916 aa11.61□□□□□ -0.55
PBRM1-203ENST00000356770 ANP32BQ92688 251 aaKnown RBP11.56□□□□□ -0.56
PBRM1-203ENST00000356770 TRIM52Q96A61 297 aa11.56□□□□□ -0.56
PBRM1-203ENST00000356770 TRIM26Q12899 539 aaPredicted RBP11.56□□□□□ -0.56
PBRM1-203ENST00000356770 CDK11AQ9UQ88 783 aaPredicted RBP11.55□□□□□ -0.56
PBRM1-203ENST00000356770 PLPPR3Q6T4P5 718 aa11.52□□□□□ -0.57
PBRM1-203ENST00000356770 FAM50AQ14320 339 aaKnown RBP11.52□□□□□ -0.57
PBRM1-203ENST00000356770 HRCP23327 699 aa11.51□□□□□ -0.57
PBRM1-203ENST00000356770 CDK11BP21127 795 aaKnown RBP11.51□□□□□ -0.57
PBRM1-203ENST00000356770 ZNF326Q5BKZ1 582 aaKnown RBP11.51□□□□□ -0.57
PBRM1-203ENST00000356770 EIF5BO60841 1220 aaKnown RBP11.5□□□□□ -0.57
PBRM1-203ENST00000356770 HSP90AA1P07900 732 aaKnown RBP11.49□□□□□ -0.57
PBRM1-203ENST00000356770 NEUROD1Q13562 356 aa11.47□□□□□ -0.57
PBRM1-203ENST00000356770 FBLN2P98095 1184 aa11.44□□□□□ -0.58
PBRM1-203ENST00000356770 DIEXFQ68CQ4 756 aaKnown RBP11.42□□□□□ -0.58
PBRM1-203ENST00000356770 ANP32CO43423 234 aa11.42□□□□□ -0.58
PBRM1-203ENST00000356770 NPM2Q86SE8 214 aaKnown RBP11.42□□□□□ -0.58
PBRM1-203ENST00000356770 ANP32AP39687 249 aaKnown RBP11.41□□□□□ -0.58
PBRM1-203ENST00000356770 ESF1Q9H501 851 aaKnown RBP11.39□□□□□ -0.59
PBRM1-203ENST00000356770 GLIPR1L2Q4G1C9 344 aa11.39□□□□□ -0.59
PBRM1-203ENST00000356770 A0A0G2JS52 829 aa11.34□□□□□ -0.59
PBRM1-203ENST00000356770 UPF2Q9HAU5 1272 aaKnown RBP11.32□□□□□ -0.6
PBRM1-203ENST00000356770 TULP1O00294 542 aaPredicted RBP11.31□□□□□ -0.6
PBRM1-203ENST00000356770 SCAF1Q9H7N4 1312 aaKnown RBP11.3□□□□□ -0.6
PBRM1-203ENST00000356770 STAG3Q9UJ98 1225 aa11.29□□□□□ -0.6
PBRM1-203ENST00000356770 ARXQ96QS3 562 aa11.28□□□□□ -0.6
PBRM1-203ENST00000356770 LOC105371045A0A1W2PR82 267 aa11.23□□□□□ -0.61
PBRM1-203ENST00000356770 GTF3C3Q9Y5Q9 886 aa11.21□□□□□ -0.61
PBRM1-203ENST00000356770 NCBP3Q53F19 620 aaKnown RBP11.2□□□□□ -0.62
PBRM1-203ENST00000356770 CHGAP10645 457 aaKnown RBP11.2□□□□□ -0.62
PBRM1-203ENST00000356770 PLEKHG5O94827 1062 aa11.14□□□□□ -0.63
PBRM1-203ENST00000356770 ARID3CA6NKF2 412 aa11.13□□□□□ -0.63
PBRM1-203ENST00000356770 ZBTB7CA1YPR0 619 aa11.13□□□□□ -0.63
PBRM1-203ENST00000356770 NBR1Q14596 966 aa11.12□□□□□ -0.63
PBRM1-203ENST00000356770 ZNF777Q9ULD5 760 aaPredicted RBP11.12□□□□□ -0.63
PBRM1-203ENST00000356770 SALL2Q9Y467 1007 aaPredicted RBP11.12□□□□□ -0.63
PBRM1-203ENST00000356770 PABPN1Q86U42 306 aaKnown RBP eCLIP11.12□□□□□ -0.63
PBRM1-203ENST00000356770 NPM1P06748 294 aaKnown RBP eCLIP11.1□□□□□ -0.63
PBRM1-203ENST00000356770 MYH16Q9H6N6 1097 aa11.1□□□□□ -0.63
PBRM1-203ENST00000356770 NCLP19338 710 aaKnown RBP11.1□□□□□ -0.63
PBRM1-203ENST00000356770 TNNT2P45379 298 aaPredicted RBP11.1□□□□□ -0.63
PBRM1-203ENST00000356770 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.1□□□□□ -0.63
PBRM1-203ENST00000356770 ZRSR1Q15695 479 aaKnown RBP11.09□□□□□ -0.63
PBRM1-203ENST00000356770 TRIM44Q96DX7 344 aaPredicted RBP11.06□□□□□ -0.64
PBRM1-203ENST00000356770 C14orf37Q86TY3 774 aa11.06□□□□□ -0.64
PBRM1-203ENST00000356770 TPRNQ4KMQ1 711 aa11.04□□□□□ -0.64
PBRM1-203ENST00000356770 HAP1P54257 671 aaPredicted RBP11.03□□□□□ -0.64
PBRM1-203ENST00000356770 NPHP1O15259 732 aa11.02□□□□□ -0.64
PBRM1-203ENST00000356770 DNTTIP2Q5QJE6 756 aaKnown RBP11.02□□□□□ -0.65
PBRM1-203ENST00000356770 TAOK2Q9UL54 1235 aa11.02□□□□□ -0.65
PBRM1-203ENST00000356770 FKBP8Q14318 412 aa11.02□□□□□ -0.65
PBRM1-203ENST00000356770 FAM9BQ8IZU0 186 aa11.01□□□□□ -0.65
PBRM1-203ENST00000356770 WDR43Q15061 677 aaKnown RBP eCLIP11.01□□□□□ -0.65
PBRM1-203ENST00000356770 CLSTN1O94985 981 aa11□□□□□ -0.65
PBRM1-203ENST00000356770 PTMAP06454 111 aaKnown RBP11□□□□□ -0.65
PBRM1-203ENST00000356770 P3H3Q8IVL6 736 aa10.99□□□□□ -0.65
PBRM1-203ENST00000356770 CCDC136Q96JN2 1154 aa10.98□□□□□ -0.65
PBRM1-203ENST00000356770 HNRNPUQ00839 825 aaKnown RBP eCLIP10.97□□□□□ -0.65
PBRM1-203ENST00000356770 ABCC9O60706 1549 aa10.96□□□□□ -0.65
PBRM1-203ENST00000356770 TMC1Q8TDI8 760 aa10.96□□□□□ -0.65
PBRM1-203ENST00000356770 GOLGA6L22H0YM25 854 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms