RNA–Protein interactions for RNA: ENST00000356415.5

RAP1A-201, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 1,586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-201ENST00000356415 NISCHQ9Y2I1 1504 aa30.73■■■□□ 2.51
RAP1A-201ENST00000356415 CCDC180Q9P1Z9 1646 aa26.94■■□□□ 1.9
RAP1A-201ENST00000356415 ABCC9O60706 1549 aa26.04■■□□□ 1.76
RAP1A-201ENST00000356415 DCAF8L2P0C7V8 631 aa25.72■■□□□ 1.71
RAP1A-201ENST00000356415 ZCCHC6Q5VYS8 1495 aaKnown RBP25.68■■□□□ 1.7
RAP1A-201ENST00000356415 DCAF1Q9Y4B6 1507 aa25.4■■□□□ 1.66
RAP1A-201ENST00000356415 NACADO15069 1562 aa25.31■■□□□ 1.64
RAP1A-201ENST00000356415 MYO15BQ96JP2 1530 aa25.31■■□□□ 1.64
RAP1A-201ENST00000356415 RB1CC1Q8TDY2 1594 aa25.2■■□□□ 1.63
RAP1A-201ENST00000356415 SHROOM4Q9ULL8 1493 aa24.76■■□□□ 1.55
RAP1A-201ENST00000356415 SCRIBQ14160 1630 aa24.73■■□□□ 1.55
RAP1A-201ENST00000356415 PABPN1Q86U42 306 aaKnown RBP eCLIP24.52■■□□□ 1.52
RAP1A-201ENST00000356415 UNC13AQ9UPW8 1703 aa24.45■■□□□ 1.51
RAP1A-201ENST00000356415 BICRAQ9NZM4 1560 aa24.37■■□□□ 1.49
RAP1A-201ENST00000356415 CECR2Q9BXF3 1484 aa23.92■■□□□ 1.42
RAP1A-201ENST00000356415 BAZ1AQ9NRL2 1556 aaPredicted RBP23.77■■□□□ 1.4
RAP1A-201ENST00000356415 EIF4G1Q04637 1599 aaKnown RBP23.73■■□□□ 1.39
RAP1A-201ENST00000356415 MROH2BQ7Z745 1585 aa23.7■■□□□ 1.38
RAP1A-201ENST00000356415 SMARCA4P51532 1647 aa23.67■■□□□ 1.38
RAP1A-201ENST00000356415 RSF1Q96T23 1441 aaPredicted RBP23.67■■□□□ 1.38
RAP1A-201ENST00000356415 SUPT5HO00267 1087 aaKnown RBP23.64■■□□□ 1.37
RAP1A-201ENST00000356415 CC2D2AQ9P2K1 1620 aa23.49■■□□□ 1.35
RAP1A-201ENST00000356415 ATAD2BQ9ULI0 1458 aa23.49■■□□□ 1.35
RAP1A-201ENST00000356415 DNAJC5BQ9UF47 199 aa23.46■■□□□ 1.35
RAP1A-201ENST00000356415 SMARCA2P51531 1590 aa23.45■■□□□ 1.35
RAP1A-201ENST00000356415 WIZO95785 1651 aa23.42■■□□□ 1.34
RAP1A-201ENST00000356415 PEG3Q9GZU2 1588 aa23.41■■□□□ 1.34
RAP1A-201ENST00000356415 NCAPD3P42695 1498 aa23.4■■□□□ 1.34
RAP1A-201ENST00000356415 AEBP2Q6ZN18 517 aaPredicted RBP23.4■■□□□ 1.34
RAP1A-201ENST00000356415 BAZ1BQ9UIG0 1483 aaKnown RBP23.34■■□□□ 1.33
RAP1A-201ENST00000356415 HMGXB3Q12766 1538 aa23.26■■□□□ 1.31
RAP1A-201ENST00000356415 TOP2AP11388 1531 aaKnown RBP23.22■■□□□ 1.31
RAP1A-201ENST00000356415 CCDC88BA6NC98 1476 aa23.02■■□□□ 1.27
RAP1A-201ENST00000356415 CADPSQ9ULU8 1353 aa22.79■■□□□ 1.24
RAP1A-201ENST00000356415 CFTRP13569 1480 aa22.72■■□□□ 1.23
RAP1A-201ENST00000356415 NESP48681 1621 aa22.66■■□□□ 1.22
RAP1A-201ENST00000356415 LAMC3Q9Y6N6 1575 aa22.63■■□□□ 1.21
RAP1A-201ENST00000356415 PDS5BQ9NTI5 1447 aa22.56■■□□□ 1.2
RAP1A-201ENST00000356415 FANCD2Q9BXW9 1451 aa22.5■■□□□ 1.19
RAP1A-201ENST00000356415 ERCC6Q03468 1493 aa22.43■■□□□ 1.18
RAP1A-201ENST00000356415 CEP164Q9UPV0 1460 aa22.41■■□□□ 1.18
RAP1A-201ENST00000356415 PRDM2Q13029 1718 aa22.35■■□□□ 1.17
RAP1A-201ENST00000356415 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
RAP1A-201ENST00000356415 WRNQ14191 1432 aaPredicted RBP eCLIP22.32■■□□□ 1.16
RAP1A-201ENST00000356415 ABCC8Q09428 1581 aa22.31■■□□□ 1.16
RAP1A-201ENST00000356415 TRIM41Q8WV44 630 aa22.29■■□□□ 1.16
RAP1A-201ENST00000356415 KIF21AQ7Z4S6 1674 aa22.28■■□□□ 1.16
RAP1A-201ENST00000356415 MRC2Q9UBG0 1479 aa22.25■■□□□ 1.15
RAP1A-201ENST00000356415 URB2Q14146 1524 aaKnown RBP22.2■■□□□ 1.14
RAP1A-201ENST00000356415 CUX1P39880 1505 aa22.19■■□□□ 1.14
RAP1A-201ENST00000356415 TOPBP1Q92547 1522 aa22.17■■□□□ 1.14
RAP1A-201ENST00000356415 DNMBPQ6XZF7 1577 aa22.15■■□□□ 1.14
RAP1A-201ENST00000356415 SYNJ1O43426 1573 aa22.14■■□□□ 1.13
RAP1A-201ENST00000356415 TOP2BQ02880 1626 aa22.11■■□□□ 1.13
RAP1A-201ENST00000356415 WDR62O43379 1518 aa22.1■■□□□ 1.13
RAP1A-201ENST00000356415 THOC2Q8NI27 1593 aaKnown RBP22.09■■□□□ 1.13
RAP1A-201ENST00000356415 FGD5Q6ZNL6 1462 aa22.06■■□□□ 1.12
RAP1A-201ENST00000356415 BIVM-ERCC5R4GMW8 1640 aa22.05■■□□□ 1.12
RAP1A-201ENST00000356415 POLA1P09884 1462 aaPredicted RBP22.03■■□□□ 1.12
RAP1A-201ENST00000356415 SOGA1O94964 1423 aa22.02■■□□□ 1.12
RAP1A-201ENST00000356415 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
RAP1A-201ENST00000356415 CUX2O14529 1486 aa21.94■■□□□ 1.1
RAP1A-201ENST00000356415 IFT140Q96RY7 1462 aa21.92■■□□□ 1.1
RAP1A-201ENST00000356415 ABCA10Q8WWZ4 1543 aa21.85■■□□□ 1.09
RAP1A-201ENST00000356415 TDRD9Q8NDG6 1382 aaKnown RBP21.85■■□□□ 1.09
RAP1A-201ENST00000356415 FAM9AQ8IZU1 332 aaPredicted RBP21.84■■□□□ 1.09
RAP1A-201ENST00000356415 KIF27Q86VH2 1401 aa21.82■■□□□ 1.08
RAP1A-201ENST00000356415 TARBP1Q13395 1621 aaKnown RBP21.81■■□□□ 1.08
RAP1A-201ENST00000356415 RUSC2Q8N2Y8 1516 aa21.77■■□□□ 1.07
RAP1A-201ENST00000356415 ZNF608Q9ULD9 1512 aaPredicted RBP21.77■■□□□ 1.07
RAP1A-201ENST00000356415 AQRO60306 1485 aaKnown RBP eCLIP21.76■■□□□ 1.07
RAP1A-201ENST00000356415 EEA1Q15075 1411 aa21.74■■□□□ 1.07
RAP1A-201ENST00000356415 CSRNP3Q8WYN3 585 aa21.74■■□□□ 1.07
RAP1A-201ENST00000356415 GAPVD1Q14C86 1478 aa21.73■■□□□ 1.07
RAP1A-201ENST00000356415 IGF1RP08069 1367 aa21.69■■□□□ 1.06
RAP1A-201ENST00000356415 WDR97A6NE52 1622 aa21.68■■□□□ 1.06
RAP1A-201ENST00000356415 GRIN2BQ13224 1484 aa21.64■■□□□ 1.06
RAP1A-201ENST00000356415 ABCA5Q8WWZ7 1642 aa21.64■■□□□ 1.05
RAP1A-201ENST00000356415 EIF4G3O43432 1585 aaKnown RBP21.62■■□□□ 1.05
RAP1A-201ENST00000356415 ERICH3Q5RHP9 1530 aa21.59■■□□□ 1.05
RAP1A-201ENST00000356415 CARMIL1Q5VZK9 1371 aa21.57■■□□□ 1.04
RAP1A-201ENST00000356415 EHMT2Q96KQ7 1210 aa21.54■■□□□ 1.04
RAP1A-201ENST00000356415 SNAPC4Q5SXM2 1469 aa21.53■■□□□ 1.04
RAP1A-201ENST00000356415 FBLN2P98095 1184 aa21.52■■□□□ 1.04
RAP1A-201ENST00000356415 CHMP7Q8WUX9 453 aaPredicted RBP21.51■■□□□ 1.03
RAP1A-201ENST00000356415 FHAD1B1AJZ9 1412 aa21.5■■□□□ 1.03
RAP1A-201ENST00000356415 MAGI1Q96QZ7 1491 aaPredicted RBP21.5■■□□□ 1.03
RAP1A-201ENST00000356415 PRXQ9BXM0 1461 aa21.5■■□□□ 1.03
RAP1A-201ENST00000356415 PBRM1Q86U86 1689 aa21.48■■□□□ 1.03
RAP1A-201ENST00000356415 RAPGEF2Q9Y4G8 1499 aa21.47■■□□□ 1.03
RAP1A-201ENST00000356415 LOC105371045A0A1W2PR82 267 aa21.46■■□□□ 1.03
RAP1A-201ENST00000356415 CUL7Q14999 1698 aa21.44■■□□□ 1.02
RAP1A-201ENST00000356415 UBTFP17480 764 aaKnown RBP21.44■■□□□ 1.02
RAP1A-201ENST00000356415 SYNJ2O15056 1496 aa21.43■■□□□ 1.02
RAP1A-201ENST00000356415 ADAMTS12P58397 1594 aa21.41■■□□□ 1.02
RAP1A-201ENST00000356415 GOLGA3Q08378 1498 aa21.4■■□□□ 1.02
RAP1A-201ENST00000356415 KIF21BO75037 1637 aa21.39■■□□□ 1.01
RAP1A-201ENST00000356415 GRIN2AQ12879 1464 aa21.35■■□□□ 1.01
RAP1A-201ENST00000356415 TNIKQ9UKE5 1360 aa21.27■□□□□ 0.99
RAP1A-201ENST00000356415 OSCARQ8IYS5 282 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms