RNA–Protein interactions for RNA: ENST00000356073.8

TCF4-202, Transcript of transcription factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF4, Length 8,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-202ENST00000356073 DCAF8L2P0C7V8 631 aa19.44■□□□□ 0.7
TCF4-202ENST00000356073 MYT1Q01538 1121 aa19.04■□□□□ 0.64
TCF4-202ENST00000356073 PELP1Q8IZL8 1130 aaKnown RBP18.62■□□□□ 0.57
TCF4-202ENST00000356073 FAM9AQ8IZU1 332 aaPredicted RBP18.12■□□□□ 0.49
TCF4-202ENST00000356073 EHMT2Q96KQ7 1210 aa17.93■□□□□ 0.46
TCF4-202ENST00000356073 TTBK1Q5TCY1 1321 aaPredicted RBP17.76■□□□□ 0.43
TCF4-202ENST00000356073 APLP2Q06481 763 aa17.73■□□□□ 0.43
TCF4-202ENST00000356073 ERICH6Q7L0X2 663 aa17.66■□□□□ 0.42
TCF4-202ENST00000356073 CCER1Q8TC90 406 aaPredicted RBP17.63■□□□□ 0.41
TCF4-202ENST00000356073 YTHDC1Q96MU7 727 aaKnown RBP17.48■□□□□ 0.39
TCF4-202ENST00000356073 SUPT5HO00267 1087 aaKnown RBP17.47■□□□□ 0.39
TCF4-202ENST00000356073 ATP1B4Q9UN42 357 aaPredicted RBP17.37■□□□□ 0.37
TCF4-202ENST00000356073 MYT1LQ9UL68 1186 aa17.31■□□□□ 0.36
TCF4-202ENST00000356073 RANGAP1P46060 587 aaPredicted RBP17.22■□□□□ 0.35
TCF4-202ENST00000356073 CENPBP07199 599 aaPredicted RBP17.19■□□□□ 0.34
TCF4-202ENST00000356073 CHIC1Q5VXU3 224 aa17.13■□□□□ 0.33
TCF4-202ENST00000356073 DAXXQ9UER7 740 aaPredicted RBP16.96■□□□□ 0.31
TCF4-202ENST00000356073 ZEB1P37275 1124 aaPredicted RBP16.93■□□□□ 0.3
TCF4-202ENST00000356073 SLC4A1APQ9BWU0 796 aaKnown RBP16.9■□□□□ 0.3
TCF4-202ENST00000356073 NEFLP07196 543 aa16.85■□□□□ 0.29
TCF4-202ENST00000356073 POLR3GLQ9BT43 218 aa16.79■□□□□ 0.28
TCF4-202ENST00000356073 SHROOM4Q9ULL8 1493 aa16.77■□□□□ 0.28
TCF4-202ENST00000356073 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.72■□□□□ 0.27
TCF4-202ENST00000356073 HNRNPUL2Q1KMD3 747 aaKnown RBP16.72■□□□□ 0.27
TCF4-202ENST00000356073 PCGF6Q9BYE7 350 aa16.7■□□□□ 0.26
TCF4-202ENST00000356073 SLC24A1O60721 1099 aa16.61■□□□□ 0.25
TCF4-202ENST00000356073 CNGB1Q14028 1251 aaPredicted RBP16.61■□□□□ 0.25
TCF4-202ENST00000356073 CLSPNQ9HAW4 1339 aa16.5■□□□□ 0.23
TCF4-202ENST00000356073 UBTFP17480 764 aaKnown RBP16.41■□□□□ 0.22
TCF4-202ENST00000356073 ZNF316A6NFI3 1004 aaPredicted RBP16.4■□□□□ 0.22
TCF4-202ENST00000356073 BCL11AQ9H165 835 aa16.38■□□□□ 0.21
TCF4-202ENST00000356073 BCANQ96GW7 911 aa16.36■□□□□ 0.21
TCF4-202ENST00000356073 ZBTB47Q9UFB7 747 aaPredicted RBP16.35■□□□□ 0.21
TCF4-202ENST00000356073 GLIPR1L2Q4G1C9 344 aa16.28■□□□□ 0.2
TCF4-202ENST00000356073 RTL5Q5HYW3 569 aaPredicted RBP16.23■□□□□ 0.19
TCF4-202ENST00000356073 ITGAEP38570 1179 aa16.21■□□□□ 0.19
TCF4-202ENST00000356073 PLPPR3Q6T4P5 718 aa16.15■□□□□ 0.18
TCF4-202ENST00000356073 A0A0G2JS52 829 aa16.06■□□□□ 0.16
TCF4-202ENST00000356073 TRIM41Q8WV44 630 aa16.03■□□□□ 0.16
TCF4-202ENST00000356073 NEFMP07197 916 aa15.99■□□□□ 0.15
TCF4-202ENST00000356073 CDK11BP21127 795 aaKnown RBP15.99■□□□□ 0.15
TCF4-202ENST00000356073 CDK11AQ9UQ88 783 aaPredicted RBP15.99■□□□□ 0.15
TCF4-202ENST00000356073 ESF1Q9H501 851 aaKnown RBP15.95■□□□□ 0.14
TCF4-202ENST00000356073 SCAF1Q9H7N4 1312 aaKnown RBP15.91■□□□□ 0.14
TCF4-202ENST00000356073 CANXP27824 592 aaKnown RBP15.88■□□□□ 0.13
TCF4-202ENST00000356073 PPARGC1BQ86YN6 1023 aaKnown RBP15.87■□□□□ 0.13
TCF4-202ENST00000356073 NCBP3Q53F19 620 aaKnown RBP15.84■□□□□ 0.13
TCF4-202ENST00000356073 TULP1O00294 542 aaPredicted RBP15.8■□□□□ 0.12
TCF4-202ENST00000356073 NPM2Q86SE8 214 aaKnown RBP15.75■□□□□ 0.11
TCF4-202ENST00000356073 FBLN2P98095 1184 aa15.74■□□□□ 0.11
TCF4-202ENST00000356073 ZNF326Q5BKZ1 582 aaKnown RBP15.74■□□□□ 0.11
TCF4-202ENST00000356073 TRIM52Q96A61 297 aa15.72■□□□□ 0.11
TCF4-202ENST00000356073 STAG3Q9UJ98 1225 aa15.72■□□□□ 0.11
TCF4-202ENST00000356073 PLEKHG5O94827 1062 aa15.64■□□□□ 0.09
TCF4-202ENST00000356073 NISCHQ9Y2I1 1504 aa15.62■□□□□ 0.09
TCF4-202ENST00000356073 TRIM26Q12899 539 aaPredicted RBP15.6■□□□□ 0.09
TCF4-202ENST00000356073 ANP32BQ92688 251 aaKnown RBP15.6■□□□□ 0.09
TCF4-202ENST00000356073 HSP90AA1P07900 732 aaKnown RBP15.59■□□□□ 0.09
TCF4-202ENST00000356073 HRCP23327 699 aa15.58■□□□□ 0.09
TCF4-202ENST00000356073 FAM50AQ14320 339 aaKnown RBP15.56■□□□□ 0.08
TCF4-202ENST00000356073 HAP1P54257 671 aaPredicted RBP15.53■□□□□ 0.08
TCF4-202ENST00000356073 ZBTB7CA1YPR0 619 aa15.52■□□□□ 0.08
TCF4-202ENST00000356073 CHGAP10645 457 aaKnown RBP15.5■□□□□ 0.07
TCF4-202ENST00000356073 NPHP1O15259 732 aa15.49■□□□□ 0.07
TCF4-202ENST00000356073 TNNT2P45379 298 aaPredicted RBP15.49■□□□□ 0.07
TCF4-202ENST00000356073 ARXQ96QS3 562 aa15.49■□□□□ 0.07
TCF4-202ENST00000356073 C14orf37Q86TY3 774 aa15.45■□□□□ 0.06
TCF4-202ENST00000356073 KRI1Q8N9T8 703 aaKnown RBP15.44■□□□□ 0.06
TCF4-202ENST00000356073 ANP32AP39687 249 aaKnown RBP15.43■□□□□ 0.06
TCF4-202ENST00000356073 EIF5BO60841 1220 aaKnown RBP15.41■□□□□ 0.06
TCF4-202ENST00000356073 NEUROD1Q13562 356 aa15.41■□□□□ 0.06
TCF4-202ENST00000356073 PRM3Q9NNZ6 103 aa15.4■□□□□ 0.06
TCF4-202ENST00000356073 NCLP19338 710 aaKnown RBP15.37■□□□□ 0.05
TCF4-202ENST00000356073 CLSTN1O94985 981 aa15.36■□□□□ 0.05
TCF4-202ENST00000356073 NPM1P06748 294 aaKnown RBP eCLIP15.36■□□□□ 0.05
TCF4-202ENST00000356073 SENP3Q9H4L4 574 aaPredicted RBP15.35■□□□□ 0.05
TCF4-202ENST00000356073 DIEXFQ68CQ4 756 aaKnown RBP15.33■□□□□ 0.04
TCF4-202ENST00000356073 ARID3CA6NKF2 412 aa15.29■□□□□ 0.04
TCF4-202ENST00000356073 TRIM44Q96DX7 344 aaPredicted RBP15.28■□□□□ 0.04
TCF4-202ENST00000356073 ZNF777Q9ULD5 760 aaPredicted RBP15.25■□□□□ 0.03
TCF4-202ENST00000356073 UPF2Q9HAU5 1272 aaKnown RBP15.24■□□□□ 0.03
TCF4-202ENST00000356073 ANP32EQ9BTT0 268 aa15.23■□□□□ 0.03
TCF4-202ENST00000356073 TAOK2Q9UL54 1235 aa15.2■□□□□ 0.02
TCF4-202ENST00000356073 ANP32CO43423 234 aa15.19■□□□□ 0.02
TCF4-202ENST00000356073 ZRSR1Q15695 479 aaKnown RBP15.15■□□□□ 0.02
TCF4-202ENST00000356073 GTF3C3Q9Y5Q9 886 aa15.14■□□□□ 0.01
TCF4-202ENST00000356073 ISY1Q9ULR0 285 aaKnown RBP15.14■□□□□ 0.01
TCF4-202ENST00000356073 GOLGA2Q08379 1002 aa15.12■□□□□ 0.01
TCF4-202ENST00000356073 LMOD2Q6P5Q4 547 aa15.1■□□□□ 0.01
TCF4-202ENST00000356073 ARID4BQ4LE39 1312 aaPredicted RBP15.1■□□□□ 0.01
TCF4-202ENST00000356073 MYH16Q9H6N6 1097 aa15.09■□□□□ 0.01
TCF4-202ENST00000356073 PPP1R15AO75807 674 aaPredicted RBP15.07■□□□□ 0
TCF4-202ENST00000356073 TPRNQ4KMQ1 711 aa15.03■□□□□ -0
TCF4-202ENST00000356073 SALL2Q9Y467 1007 aaPredicted RBP15□□□□□ -0.01
TCF4-202ENST00000356073 ERICH6BQ5W0A0 696 aa14.99□□□□□ -0.01
TCF4-202ENST00000356073 ACIN1Q9UKV3 1341 aaKnown RBP14.97□□□□□ -0.01
TCF4-202ENST00000356073 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.97□□□□□ -0.01
TCF4-202ENST00000356073 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.96□□□□□ -0.01
TCF4-202ENST00000356073 FKBP8Q14318 412 aa14.96□□□□□ -0.01
TCF4-202ENST00000356073 TRHP20396 242 aaPredicted RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms