RNA–Protein interactions for RNA: ENST00000355650.4

ZNF253-201, Transcript of zinc finger protein 253, humanhuman

TSL 1 (best) BASIC

Gene ZNF253, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253-201ENST00000355650 NISCHQ9Y2I1 1504 aa14.06□□□□□ -0.16
ZNF253-201ENST00000355650 AEBP2Q6ZN18 517 aaPredicted RBP13.4□□□□□ -0.26
ZNF253-201ENST00000355650 CHIC1Q5VXU3 224 aa12.74□□□□□ -0.37
ZNF253-201ENST00000355650 CCDC180Q9P1Z9 1646 aa11.97□□□□□ -0.49
ZNF253-201ENST00000355650 SHROOM4Q9ULL8 1493 aa11.89□□□□□ -0.51
ZNF253-201ENST00000355650 ZCCHC6Q5VYS8 1495 aaKnown RBP11.87□□□□□ -0.51
ZNF253-201ENST00000355650 SENP3Q9H4L4 574 aaPredicted RBP11.75□□□□□ -0.53
ZNF253-201ENST00000355650 SUPT5HO00267 1087 aaKnown RBP11.64□□□□□ -0.55
ZNF253-201ENST00000355650 DCAF8L2P0C7V8 631 aa11.63□□□□□ -0.55
ZNF253-201ENST00000355650 DCAF1Q9Y4B6 1507 aa11.55□□□□□ -0.56
ZNF253-201ENST00000355650 PHF23Q9BUL5 403 aaPredicted RBP11.39□□□□□ -0.59
ZNF253-201ENST00000355650 POTEDQ86YR6 584 aa11.37□□□□□ -0.59
ZNF253-201ENST00000355650 MYO15BQ96JP2 1530 aa11.24□□□□□ -0.61
ZNF253-201ENST00000355650 SCRIBQ14160 1630 aa11.19□□□□□ -0.62
ZNF253-201ENST00000355650 ABCC9O60706 1549 aa11.18□□□□□ -0.62
ZNF253-201ENST00000355650 RSF1Q96T23 1441 aaPredicted RBP11.1□□□□□ -0.63
ZNF253-201ENST00000355650 NACADO15069 1562 aa11.09□□□□□ -0.63
ZNF253-201ENST00000355650 LOC105371045A0A1W2PR82 267 aa10.97□□□□□ -0.65
ZNF253-201ENST00000355650 CECR2Q9BXF3 1484 aa10.97□□□□□ -0.65
ZNF253-201ENST00000355650 RB1CC1Q8TDY2 1594 aa10.95□□□□□ -0.66
ZNF253-201ENST00000355650 MROH2BQ7Z745 1585 aa10.92□□□□□ -0.66
ZNF253-201ENST00000355650 FOXD1Q16676 465 aa10.89□□□□□ -0.67
ZNF253-201ENST00000355650 PCGF6Q9BYE7 350 aa10.87□□□□□ -0.67
ZNF253-201ENST00000355650 TRIM41Q8WV44 630 aa10.86□□□□□ -0.67
ZNF253-201ENST00000355650 WIZO95785 1651 aa10.85□□□□□ -0.67
ZNF253-201ENST00000355650 HRCP23327 699 aa10.83□□□□□ -0.68
ZNF253-201ENST00000355650 BAZ1AQ9NRL2 1556 aaPredicted RBP10.79□□□□□ -0.68
ZNF253-201ENST00000355650 UNC13AQ9UPW8 1703 aa10.77□□□□□ -0.69
ZNF253-201ENST00000355650 FAM9AQ8IZU1 332 aaPredicted RBP10.75□□□□□ -0.69
ZNF253-201ENST00000355650 SMARCA4P51532 1647 aa10.71□□□□□ -0.7
ZNF253-201ENST00000355650 TRIM26Q12899 539 aaPredicted RBP10.69□□□□□ -0.7
ZNF253-201ENST00000355650 EIF4G1Q04637 1599 aaKnown RBP10.68□□□□□ -0.7
ZNF253-201ENST00000355650 TOP2AP11388 1531 aaKnown RBP10.67□□□□□ -0.7
ZNF253-201ENST00000355650 BICRAQ9NZM4 1560 aa10.64□□□□□ -0.71
ZNF253-201ENST00000355650 CCDC88BA6NC98 1476 aa10.64□□□□□ -0.71
ZNF253-201ENST00000355650 PABPN1Q86U42 306 aaKnown RBP eCLIP10.64□□□□□ -0.71
ZNF253-201ENST00000355650 EHMT2Q96KQ7 1210 aa10.64□□□□□ -0.71
ZNF253-201ENST00000355650 SMARCA2P51531 1590 aa10.63□□□□□ -0.71
ZNF253-201ENST00000355650 MSH5O43196 834 aa10.62□□□□□ -0.71
ZNF253-201ENST00000355650 PPARGC1BQ86YN6 1023 aaKnown RBP10.61□□□□□ -0.71
ZNF253-201ENST00000355650 ABCC8Q09428 1581 aa10.58□□□□□ -0.72
ZNF253-201ENST00000355650 PEG3Q9GZU2 1588 aa10.53□□□□□ -0.72
ZNF253-201ENST00000355650 SOGA1O94964 1423 aa10.48□□□□□ -0.73
ZNF253-201ENST00000355650 ATAD2BQ9ULI0 1458 aa10.46□□□□□ -0.74
ZNF253-201ENST00000355650 RUSC2Q8N2Y8 1516 aa10.43□□□□□ -0.74
ZNF253-201ENST00000355650 CSRNP3Q8WYN3 585 aa10.42□□□□□ -0.74
ZNF253-201ENST00000355650 WRNQ14191 1432 aaPredicted RBP eCLIP10.42□□□□□ -0.74
ZNF253-201ENST00000355650 ZEB1P37275 1124 aaPredicted RBP10.41□□□□□ -0.74
ZNF253-201ENST00000355650 BAZ1BQ9UIG0 1483 aaKnown RBP10.41□□□□□ -0.74
ZNF253-201ENST00000355650 EEA1Q15075 1411 aa10.41□□□□□ -0.74
ZNF253-201ENST00000355650 TNIKQ9UKE5 1360 aa10.39□□□□□ -0.75
ZNF253-201ENST00000355650 CEP162Q5TB80 1403 aa10.38□□□□□ -0.75
ZNF253-201ENST00000355650 SYNJ1O43426 1573 aa10.37□□□□□ -0.75
ZNF253-201ENST00000355650 UBTFP17480 764 aaKnown RBP10.35□□□□□ -0.75
ZNF253-201ENST00000355650 GOLGA3Q08378 1498 aa10.32□□□□□ -0.76
ZNF253-201ENST00000355650 NCAPD3P42695 1498 aa10.28□□□□□ -0.76
ZNF253-201ENST00000355650 CEP164Q9UPV0 1460 aa10.28□□□□□ -0.76
ZNF253-201ENST00000355650 TTBK1Q5TCY1 1321 aaPredicted RBP10.27□□□□□ -0.76
ZNF253-201ENST00000355650 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.27□□□□□ -0.76
ZNF253-201ENST00000355650 KIF21BO75037 1637 aa10.27□□□□□ -0.77
ZNF253-201ENST00000355650 HMGXB3Q12766 1538 aa10.25□□□□□ -0.77
ZNF253-201ENST00000355650 TOP2BQ02880 1626 aa10.25□□□□□ -0.77
ZNF253-201ENST00000355650 RAPGEF2Q9Y4G8 1499 aa10.23□□□□□ -0.77
ZNF253-201ENST00000355650 CCER1Q8TC90 406 aaPredicted RBP10.22□□□□□ -0.77
ZNF253-201ENST00000355650 BIVM-ERCC5R4GMW8 1640 aa10.21□□□□□ -0.77
ZNF253-201ENST00000355650 CLIP1P30622 1438 aa10.2□□□□□ -0.78
ZNF253-201ENST00000355650 CFTRP13569 1480 aa10.17□□□□□ -0.78
ZNF253-201ENST00000355650 CUX1P39880 1505 aa10.16□□□□□ -0.78
ZNF253-201ENST00000355650 VPS8Q8N3P4 1428 aa10.16□□□□□ -0.78
ZNF253-201ENST00000355650 PRXQ9BXM0 1461 aa10.14□□□□□ -0.79
ZNF253-201ENST00000355650 RANGAP1P46060 587 aaPredicted RBP10.13□□□□□ -0.79
ZNF253-201ENST00000355650 ERICH3Q5RHP9 1530 aa10.12□□□□□ -0.79
ZNF253-201ENST00000355650 KIF27Q86VH2 1401 aa10.09□□□□□ -0.79
ZNF253-201ENST00000355650 APLP2Q06481 763 aa10.08□□□□□ -0.8
ZNF253-201ENST00000355650 PIAS4Q8N2W9 510 aaPredicted RBP10.08□□□□□ -0.8
ZNF253-201ENST00000355650 HNRNPUL2Q1KMD3 747 aaKnown RBP10.07□□□□□ -0.8
ZNF253-201ENST00000355650 PRDM2Q13029 1718 aa10.07□□□□□ -0.8
ZNF253-201ENST00000355650 CADPSQ9ULU8 1353 aa10.07□□□□□ -0.8
ZNF253-201ENST00000355650 ARAP1Q96P48 1450 aa10.05□□□□□ -0.8
ZNF253-201ENST00000355650 CC2D2AQ9P2K1 1620 aa10.03□□□□□ -0.8
ZNF253-201ENST00000355650 IGF1RP08069 1367 aa10.02□□□□□ -0.81
ZNF253-201ENST00000355650 CUX2O14529 1486 aa10.01□□□□□ -0.81
ZNF253-201ENST00000355650 KANK4Q5T7N3 995 aaPredicted RBP10□□□□□ -0.81
ZNF253-201ENST00000355650 DIEXFQ68CQ4 756 aaKnown RBP10□□□□□ -0.81
ZNF253-201ENST00000355650 FGD5Q6ZNL6 1462 aa9.99□□□□□ -0.81
ZNF253-201ENST00000355650 ARHGAP35Q9NRY4 1499 aa9.99□□□□□ -0.81
ZNF253-201ENST00000355650 CARMIL1Q5VZK9 1371 aa9.96□□□□□ -0.82
ZNF253-201ENST00000355650 FANCD2Q9BXW9 1451 aa9.96□□□□□ -0.82
ZNF253-201ENST00000355650 ZNF316A6NFI3 1004 aaPredicted RBP9.95□□□□□ -0.82
ZNF253-201ENST00000355650 RRBP1Q9P2E9 1410 aaKnown RBP9.92□□□□□ -0.82
ZNF253-201ENST00000355650 SCAF1Q9H7N4 1312 aaKnown RBP9.92□□□□□ -0.82
ZNF253-201ENST00000355650 NESP48681 1621 aa9.92□□□□□ -0.82
ZNF253-201ENST00000355650 RAD54L2Q9Y4B4 1467 aa9.9□□□□□ -0.82
ZNF253-201ENST00000355650 DNMBPQ6XZF7 1577 aa9.89□□□□□ -0.83
ZNF253-201ENST00000355650 TOPBP1Q92547 1522 aa9.89□□□□□ -0.83
ZNF253-201ENST00000355650 DHX57Q6P158 1386 aaKnown RBP9.89□□□□□ -0.83
ZNF253-201ENST00000355650 POLA1P09884 1462 aaPredicted RBP9.89□□□□□ -0.83
ZNF253-201ENST00000355650 ABCA10Q8WWZ4 1543 aa9.88□□□□□ -0.83
ZNF253-201ENST00000355650 CCNB3Q8WWL7 1395 aa9.87□□□□□ -0.83
ZNF253-201ENST00000355650 CLSPNQ9HAW4 1339 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms