RNA–Protein interactions for RNA: ENST00000353383.5

RAI1-201, Transcript of retinoic acid induced 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RAI1, Length 7,662 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1-201ENST00000353383 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.78□□□□□ -0.042e-22■■■■■ 29.1
RAI1-201ENST00000353383 PPIGQ13427 754 aaKnown RBP eCLIP16.96■□□□□ 0.317e-19■■□□□ 13.1
RAI1-201ENST00000353383 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.78■□□□□ 0.442e-10■■■■■ 44.9
RAI1-201ENST00000353383 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.12■□□□□ 0.812e-9■■■■■ 35.7
RAI1-201ENST00000353383 DDX3XO00571 662 aaKnown RBP eCLIP17.24■□□□□ 0.351e-8■■■□□ 16.4
RAI1-201ENST00000353383 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.49■□□□□ 0.232e-8■■■■■ 80.1
RAI1-201ENST00000353383 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.98■□□□□ 0.472e-8■■■■□ 23.8
RAI1-201ENST00000353383 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.12■□□□□ 0.813e-8■■■■■ 31
RAI1-201ENST00000353383 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.99■□□□□ 0.634e-8■■■■■ 41.1
RAI1-201ENST00000353383 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.32■□□□□ 0.365e-8■■■■□ 23.6
RAI1-201ENST00000353383 DDX6P26196 483 aaKnown RBP eCLIP17.17■□□□□ 0.346e-8■■■■■ 46.4
RAI1-201ENST00000353383 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.16■□□□□ 0.57e-8■■■■■ 101.1
RAI1-201ENST00000353383 UPF1Q92900 1129 aaKnown RBP eCLIP17■□□□□ 0.317e-8■■■■■ 32.4
RAI1-201ENST00000353383 EFTUD2Q15029 972 aaKnown RBP eCLIP18.36■□□□□ 0.531e-7■■■■■ 28.8
RAI1-201ENST00000353383 SF3B4Q15427 424 aaKnown RBP eCLIP16.33■□□□□ 0.21e-7■■■■■ 27.7
RAI1-201ENST00000353383 NCBP2P52298 156 aaKnown RBP eCLIP16.97■□□□□ 0.312e-7■■□□□ 14.3
RAI1-201ENST00000353383 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.73■□□□□ 0.592e-7■■■■■ 31.5
RAI1-201ENST00000353383 QKIQ96PU8 341 aaKnown RBP eCLIP17.36■□□□□ 0.372e-7■■■□□ 14.6
RAI1-201ENST00000353383 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.66■□□□□ 0.12e-7■■■■□ 24.4
RAI1-201ENST00000353383 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.18■□□□□ 0.344e-7■■■■■ 41
RAI1-201ENST00000353383 PCBP1Q15365 356 aaKnown RBP eCLIP16.93■□□□□ 0.34e-7■■■■□ 23
RAI1-201ENST00000353383 AKAP1Q92667 903 aaKnown RBP eCLIP16.9■□□□□ 0.34e-7■■■□□ 18.6
RAI1-201ENST00000353383 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.16■□□□□ 0.56e-7■■■■■ 31.8
RAI1-201ENST00000353383 EIF3HO15372 352 aaKnown RBP eCLIP17.58■□□□□ 0.46e-7■■■■□ 23.6
RAI1-201ENST00000353383 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.02■□□□□ 0.316e-7■■■■□ 24.4
RAI1-201ENST00000353383 RPS3P23396 243 aaKnown RBP eCLIP16.48■□□□□ 0.238e-7■■■■■ 45.6
RAI1-201ENST00000353383 PRPF4O43172 522 aaKnown RBP eCLIP18.55■□□□□ 0.568e-7■■■■□ 23.8
RAI1-201ENST00000353383 RBFOX2O43251 390 aaKnown RBP eCLIP15.01□□□□□ -0.019e-7■■■■■ 30.7
RAI1-201ENST00000353383 RBM5P52756 815 aaKnown RBP eCLIP20.7■□□□□ 0.99e-7■■■■■ 29.2
RAI1-201ENST00000353383 TARDBPQ13148 414 aaKnown RBP eCLIP16.95■□□□□ 0.31e-6■■■□□ 16.9
RAI1-201ENST00000353383 HNRNPMP52272 730 aaKnown RBP eCLIP20.98■□□□□ 0.951e-6■■■■□ 22.9
RAI1-201ENST00000353383 PCBP2Q15366 365 aaKnown RBP eCLIP17.02■□□□□ 0.321e-6■■■■■ 28.1
RAI1-201ENST00000353383 SF3B1O75533 1304 aaKnown RBP eCLIP17.57■□□□□ 0.41e-6■■■■■ 155.1
RAI1-201ENST00000353383 GTF2F1P35269 517 aaKnown RBP eCLIP19.64■□□□□ 0.731e-6■■■■■ 29.6
RAI1-201ENST00000353383 HNRNPLP14866 589 aaKnown RBP eCLIP17.18■□□□□ 0.341e-6■■□□□ 12.3
RAI1-201ENST00000353383 EWSR1Q01844 656 aaKnown RBP eCLIP14.96□□□□□ -0.011e-6■■■■□ 25.9
RAI1-201ENST00000353383 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.86■□□□□ 0.611e-6■■□□□ 12
RAI1-201ENST00000353383 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.25■□□□□ 0.511e-6■□□□□ 8.5
RAI1-201ENST00000353383 NONOQ15233 471 aaKnown RBP eCLIP18.89■□□□□ 0.611e-6■■■■□ 23.9
RAI1-201ENST00000353383 EIF4G2P78344 907 aaKnown RBP eCLIP22.26■■□□□ 1.152e-6■■■■■ 28.9
RAI1-201ENST00000353383 NKRFO15226 690 aaKnown RBP eCLIP17.37■□□□□ 0.372e-6■■■□□ 14.6
RAI1-201ENST00000353383 TIA1P31483 386 aaKnown RBP eCLIP16.32■□□□□ 0.22e-6■□□□□ 9.3
RAI1-201ENST00000353383 DKC1O60832 514 aaKnown RBP eCLIP19.07■□□□□ 0.642e-6■■■□□ 18
RAI1-201ENST00000353383 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.31■■□□□ 12e-6■■■■■ 149.9
RAI1-201ENST00000353383 SFPQP23246 707 aaKnown RBP eCLIP19.86■□□□□ 0.772e-6■■■■□ 20
RAI1-201ENST00000353383 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.05■□□□□ 0.322e-6■■■■□ 25.1
RAI1-201ENST00000353383 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.72■□□□□ 0.593e-6■■■■■ 53.3
RAI1-201ENST00000353383 EIF3DO15371 548 aaKnown RBP eCLIP17.71■□□□□ 0.433e-6■□□□□ 9.2
RAI1-201ENST00000353383 FKBP4Q02790 459 aaKnown RBP eCLIP20.41■□□□□ 0.864e-6■■■■■ 31.1
RAI1-201ENST00000353383 AARSP49588 968 aaKnown RBP eCLIP18.39■□□□□ 0.534e-6■■■■■ 62.2
RAI1-201ENST00000353383 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.14■□□□□ 0.344e-6■□□□□ 10.9
RAI1-201ENST00000353383 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.25■□□□□ 0.355e-6■■■□□ 17.7
RAI1-201ENST00000353383 WRNQ14191 1432 aaPredicted RBP eCLIP21.02■□□□□ 0.965e-6■■■■■ 41.8
RAI1-201ENST00000353383 PABPC4Q13310 644 aaKnown RBP eCLIP18.81■□□□□ 0.66e-6■■■■■ 34.4
RAI1-201ENST00000353383 FTOQ9C0B1 505 aaKnown RBP eCLIP18.71■□□□□ 0.596e-6■■■□□ 17.7
RAI1-201ENST00000353383 FXR2P51116 673 aaKnown RBP eCLIP17.45■□□□□ 0.387e-6■■□□□ 13.4
Retrieved 56 of 56 RNA–protein pairs in 34.7 ms